Hydrogenophaga sp. YM1: JNX00_21515
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Entry
JNX00_21515 CDS
T10285
Symbol
dapB
Name
(GenBank) 4-hydroxy-tetrahydrodipicolinate reductase
KO
K00215
4-hydroxy-tetrahydrodipicolinate reductase [EC:
1.17.1.8
]
Organism
hyy Hydrogenophaga sp. YM1
Pathway
hyy00261
Monobactam biosynthesis
hyy00300
Lysine biosynthesis
hyy01100
Metabolic pathways
hyy01110
Biosynthesis of secondary metabolites
hyy01120
Microbial metabolism in diverse environments
hyy01230
Biosynthesis of amino acids
Module
hyy_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
hyy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JNX00_21515 (dapB)
09110 Biosynthesis of other secondary metabolites
00261 Monobactam biosynthesis
JNX00_21515 (dapB)
Enzymes [BR:
hyy01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.8 4-hydroxy-tetrahydrodipicolinate reductase
JNX00_21515 (dapB)
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Motif
Pfam:
DapB_C
DapB_N
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QRR34175
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Position
complement(4561869..4562693)
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AA seq
274 aa
AA seq
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MSVATTPHRVCVAGASGRMGRMLIEAVRDSGDCRLSGALDVAASPAIGQDAGAYAGQPTG
VPITADLAQGLQGSDCLIDFTRPEGTMAHLDACVAQGVNLVIGTTGFSEAQKARIAEASQ
RIAIVMAPNMSVGVNVTLKLLEMAAKALSTGYDIEIIEAHHRHKVDAPSGTALKMGEVIA
GALGRDLKDCAVYAREGVTGERDPSSIGFATIRGGDIVGDHTVLFAGTGERIEITHKSAS
RSTYAQGSLRAVRFLAGRRAGLFDMFDVLGLRQA
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttgccaccaccccccaccgcgtctgtgtcgcgggggccagcggccgcatgggc
cgcatgctgatcgaggccgtgcgcgacagcggcgactgccggctcagcggcgcgctcgac
gtggccgccagccccgccatcggacaggacgccggcgcctacgccggccagccgaccggt
gtgccaatcaccgccgatctggcccagggccttcaaggcagcgactgcctgatcgatttc
acccgccccgagggcaccatggcccacctggacgcctgcgtggcgcagggcgtcaacctg
gtcatcggcaccaccggcttcagcgaggcgcagaaggcccgcatcgccgaggcctcccag
cgcatcgccatcgtgatggcgcccaacatgagcgtgggcgtgaacgtcacgctcaagctg
ctggagatggcggccaaggccctgtccacgggctacgacatcgagatcatcgaggcccac
caccgccacaaggtggacgcgcccagcggcaccgcgctcaagatgggcgaggtcatcgcc
ggcgccctgggccgcgacctcaaggactgcgcggtctacgcgcgcgaaggcgtcaccggc
gagcgcgacccgtccagcatcgggttcgccaccatccgcggcggcgacatcgtgggcgac
cacaccgtgctgttcgcgggcaccggcgagcgcatcgagatcacgcacaagtccgccagc
cgcagcacctacgcccagggcagcctgcgcgcggtgcgcttcctcgccggccgccgcgcc
gggctgttcgacatgttcgacgtgctggggctgcgccaggcctag
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