Hydrogenophaga sp. YM1: JNX00_21810
Help
Entry
JNX00_21810 CDS
T10285
Symbol
gmd
Name
(GenBank) GDP-mannose 4,6-dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
hyy Hydrogenophaga sp. YM1
Pathway
hyy00051
Fructose and mannose metabolism
hyy00541
Biosynthesis of various nucleotide sugars
hyy01100
Metabolic pathways
hyy01250
Biosynthesis of nucleotide sugars
Module
hyy_M01016
GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc
Brite
KEGG Orthology (KO) [BR:
hyy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
JNX00_21810 (gmd)
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JNX00_21810 (gmd)
Enzymes [BR:
hyy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
JNX00_21810 (gmd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
QRR34230
LinkDB
All DBs
Position
4620384..4621535
Genome browser
AA seq
383 aa
AA seq
DB search
MTTNPPLPHAKPRVALITGVTGQDGSYLAELLLDKGYVVHGIKRRSSQFNTQRVDHIYQD
PHIDDARFHLHYGDLSDTSNLIRIVQETQPDEVYNLGAQSHVAVSFESPEYTADVDGMGT
LRLLEAIRILGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWIVVN
YREAYGMYACNGILFNHESPRRGETFVTRKITRGLANIAQGLERCLYMGNLDSLRDWGHA
KDYVRMQWMMLQQERPEDFVIATGVQYSVRQFIDMAARELGISLRFEGEGANERAIVQAV
EGDQAPALRPGQVIVQVDPRYFRPTEVETLLGDPAKAKASLGWVPRIALREMVTEMVAAD
LAQARRHALLKTHGYAVAVSGEH
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaacccgcccctcccccacgccaagccccgcgtcgccctcatcaccggcgtc
accggccaggacggctcctacctcgccgagctgctgctcgacaagggctacgtcgtgcac
ggcatcaagcgccgcagcagccagttcaacacccagcgggtggaccacatctaccaggac
ccgcacatcgacgacgcccgcttccacctgcactacggcgacctgagcgacaccagcaac
ctgatccgcatcgtgcaggaaacgcagcccgacgaggtctacaacctcggcgcgcagagc
cacgtggcggtgagcttcgagagccccgagtacaccgccgacgtggacggcatgggcacg
ctgcgcctgctcgaggccatccgcatcctcgggctggagaagaaaacgcgcttctaccag
gccagcacctccgagctgtacggcctggtgcaggagatcccgcagaaggaaaccacgccc
ttctacccgcgcagcccctacgccgtggccaagctctacgcgtactggatcgtggtgaac
taccgcgaggcctacggcatgtacgcctgcaacggcatcctgttcaaccacgagtccccg
cgccgcggcgagaccttcgtcacccgcaagatcacgcgcggcctggccaacatcgcgcag
ggactggagcgctgcctgtacatgggcaacctcgattcgctgcgcgactggggccacgcc
aaggactacgtgcgcatgcagtggatgatgctgcagcaggaacggcccgaggacttcgtc
atcgccaccggcgtgcagtacagcgtgcgccagttcatcgacatggccgcgcgcgaactg
ggcatcagcctgcgcttcgagggcgagggcgcgaacgagcgggccatcgtgcaggccgtc
gagggcgaccaggcgccggcgctgcggccgggccaggtgatcgtgcaggtggacccgcgc
tacttccgccccaccgaggtggagacgctgctgggcgaccccgccaaggccaaggcctcg
ctgggctgggtgccgcggatcgccctgcgcgagatggtgacggagatggtggccgccgac
ctggcgcaggcccgccgccacgccctgctcaagacccacggctacgccgtggcggtgtcc
ggcgagcactga
DBGET
integrated database retrieval system