Hydrogenophaga sp. YM1: JNX00_21900
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Entry
JNX00_21900 CDS
T10285
Name
(GenBank) PAS domain S-box protein
KO
K11711
two-component system, LuxR family, sensor histidine kinase DctS [EC:
2.7.13.3
]
Organism
hyy Hydrogenophaga sp. YM1
Pathway
hyy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hyy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JNX00_21900
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
hyy01001
]
JNX00_21900
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
hyy02022
]
JNX00_21900
Enzymes [BR:
hyy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
JNX00_21900
Protein kinases [BR:
hyy01001
]
Histidine kinases
LuxR family [OT]
JNX00_21900
Two-component system [BR:
hyy02022
]
LuxR family
DctS-DctR (C4-dicarboxylate transport)
JNX00_21900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
PAS
PAS_9
PAS_4
HisKA
PAS_8
Cecropin
LPG_synthase_TM
DUF6338
Motif
Other DBs
NCBI-ProteinID:
QRR34248
LinkDB
All DBs
Position
complement(4640473..4642521)
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AA seq
682 aa
AA seq
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MKSHRWPLWGALLLLVAALLAVLVFLAAEYEVGRDQAALDQDATTVVGEIRSALLRNVQT
LQSLNAFSPTPTGWDPPAAELLAQRRELVRLEWRDPAMQVLAQRLSPYRPDVFDLLPRSQ
ALPEVRQACDAALRLSGPAYSASYFWPKRDGRGLEVMELCLPLSEAGESRGFLIATYSLP
AMLAELTDAATLRGRGLSFVESDGARLAVHSVVPLQRRTLSAHALLDLPGHTLLLQLESP
RRALGLFPNVLTGVVGALSLALLAVLALLARDMRRRQRAEQRAADALAFRKAMEDSLVTG
LRARDMSGRITYVNPAFCQMVGLSAEQLVGSGLPAPWWPPELVDEYQQRQAVRLAGQTLP
REGYESVFRRSDGTRFPVLIIEAPLIDAQGVQTGYMSAIIDLTEQRRIEELNRASQDKLQ
ATARLATVGEMASLISHELNQPLAAIASYASGTLNLLQQEPDRGEDPVGDDIERAIRRIA
EQAERAGRVIRGVADFVRRRDQVREAVEPHLLIEGISTLLTLQAKKRGIRLQVEIAPGTP
RVWCDRTMVEQVLLNLARNGMQAMPLGDPGTASGLRVLRIAIAPVMGEAHEPGTGRCARW
VRVDVIDHGQGLPPEVAQRLFTPFFTTKAEGMGLGLSLCRTVVEQHGGALHFEPALPRGT
RFSFTLPVAEAHAAQPLEAHAA
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatcccatcgctggccgctgtggggcgccttgctgctgctggtggccgcgctgctc
gcggtgctggtgttcctggcggcggagtacgaggtgggccgcgaccaggccgcgctcgac
caggacgccaccaccgtggtcggcgagatccgcagcgcgctgctgcgcaacgtgcagacc
ctgcagtcgctcaacgccttctcgcccacgcccacgggctgggacccgcccgccgccgag
ctgctggcgcagcggcgcgagctcgtgcggctggagtggcgcgatccggccatgcaggtg
ctggcgcagcgcctgtcgccctaccggcccgacgtgttcgacctgctgccgcgcagccag
gccctgcccgaggtgcgccaggcctgcgacgccgccctgcgcctgtcggggcctgcctat
tccgccagctacttctggcccaagcgcgacggccgcggcctggaggtgatggagctgtgc
ctgcccctgagcgaggccggcgagtcgcgcggctttctcatcgccacctattcgctgccc
gccatgctggccgagctgaccgacgcggccacgctgcgcgggcgcggcctgagcttcgtg
gagagcgacggcgcgcggctggccgtgcacagcgtggtgccgttgcagcggcgcaccctc
agcgcgcacgccctgctcgacttgcccggccacaccctgctgctgcagctggagagcccg
cgccgcgcgctcggcctgttccccaacgtactcaccggcgtggtgggcgcgctgtcgctg
gcgctgctggccgtgttggccctgctggcgcgcgacatgcgccggcgccagcgcgccgag
cagcgcgcggccgacgccctggcctttcgcaaggccatggaggactcactggtcaccggc
ctgcgggcgcgcgacatgagcgggcgcatcacctacgtgaacccggccttctgccagatg
gtgggcctgagcgccgagcagctcgtgggcagcggcctgcccgcgccctggtggccgccc
gagctggtggacgagtaccagcagcgccaggccgtgcgcctggccgggcagacgctgccg
cgcgaaggctacgaatcggtgttccggcgcagcgacggcacgcgttttccggtgctcatc
atcgaggccccgctgatcgacgcgcagggcgtgcagaccggctacatgagcgccatcatc
gacctcaccgagcagcgccgcatcgaggagctcaaccgcgcttcgcaggacaagctgcaa
gccacggcgcgcctggccacggtgggcgagatggcctcgctcatcagccacgaactcaac
cagccgctggccgccatcgccagctacgccagcggcacgctcaacctgctgcagcaggag
ccggaccggggcgaggacccggtgggcgacgacatcgagcgcgccatccggcgcatcgcc
gagcaggccgagcgcgcgggccgcgtgatccgcggcgtggccgacttcgtgcgccgccgc
gaccaggtgcgcgaggcggtggagccgcatctgctgatcgagggcatctccacgctgctg
acgctgcaggccaagaagcgcggcatccggctgcaggtggagatcgcgcccggcacgccg
cgcgtgtggtgcgaccgcaccatggtcgaacaggtgctgctcaaccttgcgcgcaacggc
atgcaggccatgccgctgggcgacccgggcacggccagcggcctgcgcgtgctgcgcatc
gccatcgcgccggtgatgggcgaggcccacgagccgggcacggggcgctgcgcgcgctgg
gtgcgcgtggacgtgatcgaccacggccagggcctgccgcccgaggtggcccagcgcctg
ttcacgcccttcttcaccaccaaggccgagggcatgggcctgggcctgagcctgtgccgc
accgtggtggagcagcacggcggcgccctgcacttcgagccggccttgccgcgcggcacg
cgcttttccttcacgctgcccgtggccgaggcgcacgcggcgcagccgctggaggcccac
gccgcctga
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