Hydrogenophaga sp. YM1: JNX00_22055
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Entry
JNX00_22055 CDS
T10285
Name
(GenBank) DNA topoisomerase III
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
hyy Hydrogenophaga sp. YM1
Brite
KEGG Orthology (KO) [BR:
hyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyy03032
]
JNX00_22055
Enzymes [BR:
hyy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JNX00_22055
DNA replication proteins [BR:
hyy03032
]
Prokaryotic type
DNA Topoisomerases
JNX00_22055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_Crpt
SWIB
Toprim
Zn_ribbon_PADR1
Cas12f1-like_TNB
DUF7129
GNA1162-like
Motif
Other DBs
NCBI-ProteinID:
QRR34275
LinkDB
All DBs
Position
complement(4675415..4678372)
Genome browser
AA seq
985 aa
AA seq
DB search
MKTEGSAKTLVIAEKPSVAQDIVRALTPVAGKFDKHDEHFENERYVVTSAVGHLVEIAAP
EQFDVKRGKWSFAHLPVLPPYFELKPIDKAKSRLNAVVKLARRKDVGDLINACDAGREGE
LIFRLIEQYAGGQKGGQYQGLGKPVRRLWLQSMTPAAIREGFDKLRSDAQMRGLADAARS
RSEADWLVGINGTRAMTAFNSRDGGFFLTTVGRVQTPTLSIVVEREEKIRAHRPRDYWEV
HASFLAEAGEYPGKWFNPDFKKPTGEDADADLRADRVWSLQEAQAIVDAVRGKAASVKEE
SKPTTQACGQLYDLTSLQREANGRFGFSAKTTLQLAQSLYERHKALTYPRTDSRALPEDY
LGTVKDTFEMLAGSGMGHLAPHAKTALSKGYIRPSKRIFDNSKVSDHFAIIPTLQAPSGL
SEAEQKLYDLVVRRFIAVFFPSAEFTVTTRISSVLNHHFKTEGKVLVNPGWMAVYGKEAA
DEVEGAKPGEKGQNLVPVREGETVRTESVEHKGLQTRPPARYSEATLLAAMEGAGKLIDD
EELREAMHEKGLGTPATRAAIIEGLLAEKYMLREGRELIPTAKAFQLMTLLRGLEVEELS
KPELTGEWEYKLAQMEHGKLSRDAFMAEIASMTERLVKKAKEYDRDTVPGDYATLSTPCP
NCGGVVKENYRRFACTGADGTGEGCGFSFTKSPAGRTFETTEADAFLRDKRIGPLEGFRS
KAGWPFVAELVLKHSEEDRNWKLEFDFGDDRKDEETGELVDFSGSESLGACPKCGGAVHE
HGANYVCERAVPTAQQPTPSCDFKSGKVILQQPVAREQMSKLLATGKTDLLDKFVSMRTR
RSFKAFLAWDAEAGKVNFEFEPRDSKYPPRKAGARPAAKATAPAKKAAAKKAPAAKKAPA
EKKAPRKATAATGKQPSAALAAVIGEGPVSRPEVVKKLWDYIKANGLQDPADKRRIKADA
KLRPVFGKDAVTMFEIAGLVGDHLS
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccgaaggttctgccaaaacactggtcattgccgagaagccgtccgtggcgcag
gacatcgtgcgcgcgctcacgccggtggcgggcaagttcgacaagcacgacgagcacttc
gaaaacgagcgctatgtcgtgacctccgccgtgggccacctggtggagatcgccgcgccc
gagcagttcgacgtcaagcgcggcaagtggagcttcgcccacctgccggtgctgccgccg
tacttcgagctcaagccgatcgacaaggcgaagtcgcgactcaacgcggtggtcaagctg
gcgcggcgcaaggacgtcggcgatctcatcaacgcctgcgacgcgggccgcgagggcgag
ctgatcttccgcctgatcgagcagtacgctggcggccagaagggtggccagtaccagggc
ctgggcaagccggtgcgccggctgtggctgcagtccatgacaccggccgcgatccgcgag
ggcttcgacaagctgcgcagcgacgcgcagatgcgcggcctggccgacgcggcgcgcagc
cgctccgaggccgactggctggtgggcatcaacggcacgcgcgccatgaccgccttcaac
tcgcgcgatggcggcttcttcctcaccacggtgggccgggtgcagacgcctaccttgtcc
atcgtcgtggagcgcgaggaaaagatccgcgcgcaccgcccgcgcgactactgggaggtc
cacgccagcttcctggccgaggccggcgagtaccccggcaagtggttcaaccccgacttc
aagaagcccacgggcgaggacgccgacgccgatctgcgcgccgaccgcgtctggagcctg
caggaggcgcaggccatcgtggacgcggtgcgcggcaaggccgccagcgtgaaggaagag
agcaagcccaccacccaggcctgcggccagctctacgacctgaccagcctgcagcgcgag
gccaacggccgcttcggcttctcggccaagaccacgctgcagctcgcgcaaagcctgtac
gaacgccacaaggccctgacctacccgcgaaccgattcgcgcgccctgcccgaggactac
ctgggcacggtcaaggacaccttcgagatgctggccggcagcggcatgggccacctggca
ccgcacgccaagacggcgctgagcaagggctacatccgcccgagcaagcgcatcttcgac
aacagcaaggtctcggaccactttgccatcatccccacgctgcaggcacccagtggcctg
tccgaggccgagcagaagctctacgacctggtggtgcgccgcttcatcgcggtgttcttc
cccagcgcggagttcaccgtgaccacgcgcatcagcagcgtgctcaaccaccacttcaag
accgaaggcaaggtgctggtcaacccgggctggatggcggtctacggcaaggaagccgcc
gacgaggtggaaggcgccaagcccggtgagaagggccagaacctggtgccggtgcgcgaa
ggcgagaccgtgcgcaccgagtcggtggagcacaagggcctgcagacccgtccgcccgcg
cgctacagcgaagccacgctgctggccgccatggaaggcgccggcaagctcatcgacgac
gaggagttgcgcgaggccatgcacgaaaagggcctgggcacgccggccacgcgcgcggcc
atcatcgaaggcctgctggccgagaagtacatgctgcgcgagggccgcgaactcatcccc
accgccaaggccttccagctcatgacgctgctgcgcggcctggaggtggaggagctgtcc
aagcccgagctcaccggcgaatgggaatacaagctcgcgcagatggagcacggcaagctg
tcgcgcgacgccttcatggccgagatcgcgtccatgaccgagcgcctggtgaagaaggcc
aaggagtacgaccgcgacaccgtgccgggcgactacgccacgctgtccacgccctgcccc
aactgcggcggcgtggtgaaggagaactaccgccgcttcgcctgcaccggcgccgacggc
accggcgagggctgcggcttctcgttcaccaagtcgcccgccgggcgcaccttcgaaacc
accgaggccgacgccttcctgcgcgacaagcgcatcggcccgctcgagggctttcgctcc
aaggcgggctggccgttcgtggccgagctcgtgctcaagcacagcgaggaagaccgcaac
tggaagctcgaattcgacttcggcgacgaccgcaaggacgaggagaccggtgaactggtc
gacttctccggcagcgaatcgctgggcgcctgccccaagtgcggcggcgcggtgcacgag
cacggcgccaactacgtgtgcgagcgcgccgtgcccacggcgcagcagcccacgccgagc
tgcgatttcaagagcggcaaggtcatcctgcagcagccggtggcgcgcgagcagatgagc
aagctgctggccaccggcaagaccgacctgctcgacaagttcgtctccatgcgcacgcgc
cgctcgttcaaggccttcctggcctgggacgccgaggccggcaaggtgaacttcgaattc
gagccgcgcgacagcaagtacccgccgcgcaaggcgggcgcgcgcccggccgccaaggcc
accgcgccggcgaagaaggccgccgcgaagaaggcgcccgccgccaagaaggcgccggcc
gagaagaaggccccgcgcaaggccaccgccgccaccggcaagcagcccagcgcggcgctg
gccgccgtcatcggcgaagggccggtgtcgcggcccgaggtggtcaagaagctgtgggac
tacatcaaggccaatggcctgcaggacccggcggacaagcgccgcatcaaggccgacgcc
aagctgcgcccggtcttcggcaaggacgccgtcaccatgttcgagatcgccggcctggtc
ggcgatcacctgagctga
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