Hydrogenophaga sp. YM1: JNX00_22200
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Entry
JNX00_22200 CDS
T10285
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
hyy Hydrogenophaga sp. YM1
Pathway
hyy02020
Two-component system
hyy02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
hyy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JNX00_22200
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
JNX00_22200
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
hyy02035
]
JNX00_22200
Bacterial motility proteins [BR:
hyy02035
]
Flagellar system
Chemotaxis proteins
MCPs
JNX00_22200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
4HB_MCP_1
Anthrone_oxy
DUF4200
SPC12
Motif
Other DBs
NCBI-ProteinID:
QRR34303
LinkDB
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Position
complement(4710137..4711696)
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AA seq
519 aa
AA seq
DB search
MQAFMRQFTVRQRMIGAIAVVLALLGAVGGAGLWGMWRLSHVATEFTERAYQETLVLSQL
KASMGAMTRHEKDMIIAYEKPDLVVAAKARWKTEADKTAVTMDSLLSGRDASRDALVTQA
QERLKAYMAAIEPVSHQLESGGYETATIANRMLGRAHEQHKALSELLTQVEQVMGEDVAG
LSARGKAASQQTLWIFGVALALAALVVVPTTLANMHSICAPVDQARHLADAIAEGDLTRP
VQAAGRDELAELLRSLGRMQTSLSRIVGDVRLSSDSIGTASQEIATGNQDLSSRTEQTAS
NLQQTAASMEQLSGTVRQSADAARQASAMAAANAEVAARGGEVVGQVVTTMQEIQSSSQK
IGDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRSLAQRSAEAAKEIKSL
IGDSVDKVQTGTQLVAQAGSTIGEIVDNAQKISAFVTDITTAAQEQSDGIGQVNTAVGQL
DQMTQQNAALVEQSAAAAESLREQAGRLAAAVQVFRVAA
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcattcatgcggcaattcaccgtgcgccagcgcatgatcggcgccatcgccgtg
gtgctggcccttctgggcgccgtcggcggcgccggcctctggggcatgtggcgcctctcg
catgtggccaccgagttcaccgagcgcgcgtatcaggaaacgctcgtgctctcgcagctc
aaggcctccatgggcgcgatgacgcgccatgagaaggacatgatcattgcctacgagaag
cccgacctggtggtcgcggccaaggcgcgctggaagaccgaagccgacaagacggccgtg
accatggacagcctgctctccggccgcgacgcctcgcgcgacgcgctggtgacccaggcg
caggagcgcctgaaggcctacatggccgcgatcgaaccggtgtcgcatcagctggagagc
ggcggctatgaaacggccaccatcgccaaccgcatgctcgggcgcgcgcacgagcagcac
aaggccctgtcggaactgctcacccaggtggagcaggtgatgggcgaggacgtggccggt
ctgagcgcgcggggcaaggcggcgagccagcagaccctgtggatcttcggcgtcgcgctg
gcgctggccgcgctggtggtggtgcccaccaccctggccaacatgcacagcatctgcgcg
cccgtggaccaggcgcgccacctggccgacgccatcgccgagggcgatctgacgcgcccg
gtgcaggccgcgggccgcgacgaactcgccgagctgctgcgctcgctgggccgcatgcag
acctcgctgtcgcgcatcgtcggtgacgtgcgcctcagcagcgacagcatcggcaccgcc
tcgcaggaaatcgccaccggcaaccaagacctgagctcgcgcaccgaacagaccgccagc
aacctgcagcagacggcggccagcatggagcagctcagcggcaccgtgcgccagagcgcc
gacgccgcgcgccaggccagcgccatggcggcggccaacgccgaagtggccgcgcgcggc
ggcgaggtggtgggccaggtggtcaccaccatgcaggagatccaatccagcagccagaag
atcggcgacatcatcggcgtcatcgacggcattgccttccagaccaacatcctggcgctc
aacgccgccgtggaagcggcgcgcgcgggcgaacagggccgcggcttcgcggtggtggcg
gccgaggtgcgcagcctggcgcagcgcagcgccgaggcggcgaaagagatcaagtccctg
atcggcgacagcgtggacaaggtgcagaccggcacgcagctcgtggcgcaggccggcagc
accattggcgagatcgtggacaacgcgcagaagatctcggccttcgtcaccgacatcacc
acggccgcgcaagagcagagcgacggcatcggtcaggtgaacaccgccgtgggccagctg
gaccagatgacgcagcagaacgcggccctggtggagcagagcgcggccgcggccgaaagc
ctgcgcgagcaggccggccgtctggccgccgcggttcaggtgttccgcgtcgcggcgtaa
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