Hymenobacter sp. PAMC 26628: AXW84_08050
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Entry
AXW84_08050 CDS
T04961
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hyz
Hymenobacter sp. PAMC 26628
Brite
KEGG Orthology (KO) [BR:
hyz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyz03032
]
AXW84_08050
03400 DNA repair and recombination proteins [BR:
hyz03400
]
AXW84_08050
Enzymes [BR:
hyz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AXW84_08050
DNA replication proteins [BR:
hyz03032
]
Prokaryotic type
DNA Topoisomerases
AXW84_08050
DNA repair and recombination proteins [BR:
hyz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AXW84_08050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
AMJ65384
UniProt:
A0A126P8D3
LinkDB
All DBs
Position
complement(1821332..1823854)
Genome browser
AA seq
840 aa
AA seq
DB search
MVKNLVIVESPAKAKTIEGYLGQDFVVRSSYGHVRDLPKDNNAIDIANGFKPTYVVSADK
KELIAQLKKLSKEAETVWLASDDDREGEAISWHLAETLNLAPAKTRRIVFREITKNAILG
AIDNPREVDQNLVNAQQARRVLDRLVGFELSPVLWKKVKPGLSAGRVQSVAVRLVVERER
EISHFLSASAYRVVARFDAGRGAVLEAELPTRFKTRAEAEAFLGNCVGATYKIESLDKKP
GKRSPAAPFTTSTLQQEASRKLGYSVAQTMSVAQKLYEAGKISYMRTDSVNLSQDAQVGA
QAAITAAYGAEYHHHRTFKTKSASAQEAHEAIRPTDFGAAKAGADASEQRLYDLIRKRAL
ASQMAEAVIERTTAVIGISTQPGTTLSATGEVITFEGFLKVYAESKDDEDEDDATKDGES
SFSRGLPPLSVGQALPLQRLSATERFSAPPARYTEASLVKKLEELGIGRPSTYAPTISTV
QKRGYVEKDTREGKERKFHVLTLEGPEVQTEVKTENYGAEKAKLFPTDTAMVVNDFLVAH
FPTVVDFQFTAKVEDEFDQIANGHEDWTKMLTGFYDKFHATIEAGQDIERSTLGSTRELG
VHPETGEKITARLGKYGPYVALGDPDGEVKPAYANLRKGQFIENLTLEDALELFKLPRIV
GQFEDKDMTANLGRFGPYVRHDSKFFSLTKEQDPHTINAEEAVALIENKRKTDAERLIKA
FPENPDIQVLNGRFGPYIVAGKKNVKIPKGEEPTDLTLERCLELAEATPDKPAKGGRFGK
KAAPAKEDKTDEPAKKKPAAAKKPAAKKASTAKAKATTAAAAKKPAAAKKPAAKKAAVAK
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggttaagaatttagttattgtcgaatcaccggccaaggccaaaaccattgaaggctac
ctgggccaggacttcgtggtgcgctccagctacggccacgtgcgcgatttgcccaaagac
aacaatgccattgatatcgccaacggcttcaagcccacttatgtggtatcggccgataaa
aaagagctgatagcgcaactaaagaagctgtctaaagaagccgaaaccgtgtggttggcg
agtgacgacgaccgcgagggcgaagccatttcctggcacttggccgaaacgctgaacttg
gcgccggccaaaacccggcgcattgtgttccgcgaaatcaccaagaatgccatcctgggg
gccattgacaacccgcgcgaggtagaccagaacctggtgaacgcccagcaagcccgccgc
gtgctcgaccgcttggtgggcttcgagctgagccccgtgctctggaaaaaggtgaagccc
ggcctgagcgccggccgcgtgcagagcgtggccgtgcgcctggtggtggagcgcgagcgc
gaaatcagccacttcctcagcgccagtgcctaccgcgtggtggcccgcttcgacgccggc
cgcggggccgtgctggaagccgagctgcccacgcgcttcaaaacccgcgccgaggccgaa
gccttcctgggcaattgcgtgggggccacctacaagatcgagagcctcgacaaaaagccc
ggcaagcgcagcccagcggcgccgttcaccacgagcacacttcagcaggaggcttcgcgc
aagctgggctactcggtggcccaaaccatgagcgtggcccagaagctgtacgaagctggc
aaaatcagctacatgcggaccgactcggtgaacctgtcgcaggacgcgcaggtgggggcc
caggcggccattacggcggcatacggcgccgaataccaccaccaccgcacgttcaaaacc
aagtcggcctcggcccaggaggcccacgaagccattcgccccaccgatttcggagccgcg
aaggccggggccgacgcctcggagcagcgcctctacgacctgattcgcaagcgggccctg
gcttcgcagatggcggaggccgtgattgagcgcaccacggccgtgattggcatcagcacg
cagccgggcaccacgctctcggctacgggcgaggtgattacgttcgaaggtttcctaaaa
gtatatgccgaaagcaaggacgacgaggacgaggacgacgcaaccaaggacggcgaaagc
agcttctcgcgtggcttgccgcccctgagcgtgggccaggccctgcccttgcagcgcctc
agcgccacggagcggttttcggctccgccggcccgctacacggaagcttcgctggtgaag
aaattggaagagctgggcattggccggccttccacctacgcccctaccatcagcacagtg
caaaagcgcggctacgtggaaaaagacacccgcgagggcaaggagcgcaagttccacgtg
ctaacgctggagggccccgaggtgcaaacggaagtcaagaccgagaactacggcgcggag
aaagccaagctgttcccgacggacaccgccatggtggtcaacgacttcctggtggcgcac
ttccccacggtggtggactttcagttcacggccaaggtggaggacgagttcgaccagatt
gccaacggccacgaggattggacgaagatgctgaccggcttctacgacaagttccacgcg
accatcgaggccgggcaggacattgagcgcagcaccttgggcagcacccgcgagctgggc
gtgcaccccgaaacgggcgagaaaataaccgcccgcctgggcaaatacggcccctacgtg
gccctgggcgaccccgacggcgaagtaaagcccgcgtacgccaacctgcgcaaaggccag
ttcatcgagaacctgaccctggaggacgccctggagctgttcaagctgccgcgcatcgtg
gggcagttcgaggacaaggacatgacggccaacctgggccgcttcgggccctacgtgcgc
cacgacagcaagtttttctccctcaccaaggagcaggacccgcacaccatcaacgccgag
gaagccgtggcgctgattgagaacaagcgcaaaaccgacgccgagcgccttatcaaggcc
ttccccgaaaatccggacattcaagtgctcaacgggcgctttgggccctacattgtggcg
ggcaagaagaacgtgaagattccgaagggcgaagagcccaccgacctgacgctggagcgc
tgcctggagctggccgaggccacgcccgacaagcccgccaagggcggccgcttcggcaag
aaggcggcccccgcgaaggaggacaaaaccgacgagccagccaagaaaaagccggccgcc
gccaaaaagcccgcggcaaagaaggcctcgacggccaaagccaaggccactactgccgcg
gcggccaagaaaccagccgcggccaagaagccagccgcgaaaaaagcagcggtagccaag
tag
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