Hymenobacter sp. PAMC 26628: AXW84_09485
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Entry
AXW84_09485 CDS
T04961
Name
(GenBank) RNA polymerase subunit sigma
KO
K03086
RNA polymerase primary sigma factor
Organism
hyz
Hymenobacter sp. PAMC 26628
Pathway
hyz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hyz00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AXW84_09485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hyz03021
]
AXW84_09485
Transcription machinery [BR:
hyz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AXW84_09485
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
UPF0122
Scm3
DUF6285
DUF3364
Motif
Other DBs
NCBI-ProteinID:
AMJ65636
LinkDB
All DBs
Position
complement(2162095..2162958)
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AA seq
287 aa
AA seq
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MRQLKISKQITNRESQSLDKYLQEIGRVDLLTPDEEVTLAQRIRDGDQQALEKLTKANLR
FVVSVAKQYQNQGLSLGDLINEGNLGLIKAAKRFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNRVGSLNKISKSFSELEQKFEREPSPEEIAEVLELTTSEVVDTLKISGRHV
SVDAPFVQGEENRLLDVLENEDEESPDMALMNDSLRKEVQRALSTLTKREADVITLYFGL
NGEAALTLEEIGEKFNLTRERVRQIKEKAIRRLRHTSRSKALKPYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacagttaaaaatcagcaagcagattaccaaccgcgaaagccagtcgctggataag
tacctccaggagattggccgggtggatttgctcacccccgacgaggaggtgaccctggct
cagcgcatccgcgacggggaccagcaggcgctggaaaagcttaccaaagccaacctgcgc
ttcgtagtgtcggtggcaaaacagtatcagaatcaagggcttagccttggtgacctcatc
aatgagggcaacctgggcctgatcaaggcagccaagcgtttcgacgaaacccgcggtttt
aaattcatttcgtacgccgtgtggtggattcgccaatccattctgcaggccttggccgag
cagagccgcatcgttcgcctgcccctgaatcgagtgggttcgctgaacaaaatcagcaag
tcgttctcggagttggagcaaaagtttgaacgcgagccctcgcctgaggaaatcgccgaa
gtactggaactgaccacctcggaagtagtggacacactcaaaatttcgggccgccacgtg
tcggtggacgcgccgtttgtccaaggtgaagaaaaccgcctgctcgacgtgctcgaaaac
gaggacgaggagtcgcccgatatggccctgatgaacgactcgcttcgcaaagaagtgcag
cgggccctgagcacgctcaccaagcgcgaggctgatgttattaccctgtacttcgggttg
aacggcgaggccgctctgacgctggaagaaattggcgagaaattcaacctaacccgcgaa
cgggtacgccagataaaggagaaggccattcgtcgcctacgccacacctcacgttcgaaa
gcactgaagccttatttgggttaa
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