Hymenobacter sp. PAMC 26628: AXW84_12005
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Entry
AXW84_12005 CDS
T04961
Name
(GenBank) hypothetical protein
KO
K21470
L,D-transpeptidase YcbB
Organism
hyz
Hymenobacter sp. PAMC 26628
Brite
KEGG Orthology (KO) [BR:
hyz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hyz01002
]
AXW84_12005
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hyz01011
]
AXW84_12005
Peptidases and inhibitors [BR:
hyz01002
]
Cysteine peptidases
Family C82
AXW84_12005
Peptidoglycan biosynthesis and degradation proteins [BR:
hyz01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
AXW84_12005
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
GPAT_C
Motif
Other DBs
NCBI-ProteinID:
AMJ66074
UniProt:
A0A126PAC4
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All DBs
Position
complement(2713059..2714801)
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AA seq
580 aa
AA seq
DB search
MVLLGSWLGAALLSGCGSDKPGQTAGTTAPAAGVSGPQPLLDSAYVARSLGAVPQFRAEL
PWAKKFYRERQYRLGWFKDHQLVPQATQLLQTIAKAGAEGLDPRKYQVKDLAKLFSALKV
APDEAHRDALEQEIDVALSGTYFVWASDFYRGVANPHDAKNTAWQVKPNKIKLHKALLTY
LGDRKSKYGYYQFAPLHPEYNNLKKALAAYRTREAAGGWPALPAGLALRPGQSSPAVSAL
RQRLLGAPADTAAHASPVYDKALMNAVKAFQNDAGLRPDGVVSGATLRELNVPIGQRIDQ
VLLNMERWRWLPKKFEPDYLLVNIPEYRLRVVENGQEALTMRVIVGKTLTATPIFSDKME
YVVLAPYWNVPFSIIDKELKNKLAANPGYLDRLNMEVVKGYGRKAIVIDPATIDWANVTQ
DNFKYTVRRRPGPQNDLGNAKFIFPNSNDVYLHDTPHGELFSQVSRNFSHGCVRVEEPIK
LAAYLLRDKPEWDEQTILDTVATHREKYITLTKKLPVYLVYLTAWADADGHAHFRDDIYG
HDKALARELLDKPAEAAPARVATRPQLAKTAALAVSPKRD
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
gtggtgctgctcggcagctggctgggcgcggcgctgctgagcggctgcggctccgacaag
cccgggcaaaccgctggcaccaccgcgccggccgccggcgtgagcggcccccagccgcta
ctcgacagcgcctacgtggcgcggtccctgggggccgtgccccagttccgggccgagctg
ccgtgggcgaagaagttctaccgcgagcggcagtaccgcctggggtggttcaaagaccac
cagctggtgccgcaagccacgcagttgctgcaaaccatcgccaaagctggcgccgagggc
ctggacccccgcaagtaccaggtgaaagacttggctaagttgttcagtgcgttgaaggta
gcgcccgatgaggcccaccgcgacgcgctggaacaagagattgacgtggcgttatcgggc
acttacttcgtgtgggcgtccgatttctaccgcggtgtggccaatccgcacgacgccaag
aacacggcttggcaggtgaagcccaacaaaatcaagctgcacaaagccctgctgacttac
cttggcgaccgcaaaagcaagtacggctactaccagtttgcgcccctgcaccccgagtac
aacaacctgaaaaaagccctggccgcctaccgcacccgcgaggccgcggggggctggccg
gcgctgcccgcgggcctggccctgcgcccggggcagtcctcgccggcggtatcggcgttg
cgccagcggctgctgggggccccggccgacaccgctgcccacgcctcgccggtgtacgac
aaggcgctgatgaacgccgtgaaagccttccagaatgacgccggcctgcggcccgacggc
gtagtgagcggggccacgctgcgcgagctgaacgtgcccatcggccagcgcatcgaccag
gttttgctgaacatggagcgttggcgctggctccccaaaaaatttgagcccgattattta
ctggtcaacattccggagtaccggctgcgcgtggtagagaacggccaggaggcgctgacc
atgcgcgtcatcgtgggcaagacccttacggccaccccgattttcagcgacaagatggag
tacgtggtgctggccccctactggaacgtgcccttcagcatcatcgacaaggagctaaaa
aataagctggccgctaaccctgggtacctcgaccgcctcaacatggaggtggtgaagggc
tacggccgcaaggccattgtcatcgaccccgccaccatcgactgggccaacgtgacgcaa
gacaattttaagtacacggtgcgccgccgcccggggccccaaaacgacttgggtaacgct
aagttcatctttcccaactcgaacgatgtgtacctgcacgatacgccccacggcgagttg
ttttcgcaggtcagccgcaactttagccacggctgcgtgagggtagaggagcccataaaa
cttgccgcgtacctgctgcgcgacaagcccgagtgggacgagcaaaccatcctcgacacc
gtggccacccaccgcgagaagtacatcacgctcaccaaaaagctgcccgtgtacctcgtc
tacctcacggcctgggccgacgccgacggccacgcccacttccgcgacgacatctacggc
cacgacaaagccctggcgcgggagttgcttgacaaacccgccgaggccgccccggcgcgg
gtcgccacccgcccacagctagccaaaacggctgccctagccgtcagccctaagcgcgat
tag
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