Hymenobacter sp. PAMC 26628: AXW84_12270
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Entry
AXW84_12270 CDS
T04961
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hyz
Hymenobacter sp. PAMC 26628
Brite
KEGG Orthology (KO) [BR:
hyz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hyz03400
]
AXW84_12270
Enzymes [BR:
hyz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AXW84_12270
DNA repair and recombination proteins [BR:
hyz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AXW84_12270
Prokaryotic type
AXW84_12270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AMJ66120
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All DBs
Position
2788237..2789559
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AA seq
440 aa
AA seq
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MKICLFWHRRDLRIHDNAGLAAALASGLPVVPLFIYDSDILDHLPDPADARLTYIFDQVE
RLAQETEAAGGTFLARYGKPAAVLEALVQEFDVATVYTNEDYEPYATRRDAEVGALLGRH
GVDFQLYKDQVIFAKDEIMTKSGTVPKVFGAYHKTFLARLTDEMLLPYGSREAFTQARLH
ALPPAAGPRPTLASMGFERKEQYVPTADLPAEDVVRQYHKTRNTPALQDGTTRLSVQLRF
GTVSVRQAMRQAKALNPKLLAEISWRDFFMMLLWHYPNTATEAYDPKMRAVPYRNHEDEF
SAWCEGRTGYPLVDAGMRELNATGYLPNRVRMTVAGFLVKQLFIDWRWGEKYFADKLLDY
ELANNVGNWQWMAGTGAVSAPWFRVYSPASQIEQVDPHREYVRRWIPELDTPAYPAPIVE
HKFGRDRAVEALRKARQEAG
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatctgcttgttctggcaccggcgcgatttgcgcattcacgacaatgcgggcctg
gcggcggccctggccagcggcctgccggtggtgccgctgttcatctacgattctgacatt
ctcgaccatttgcctgacccggccgatgcccggcttacctacatcttcgaccaagtggag
cggctggcgcaggagaccgaagcggccgggggcacctttctggcccgctatggcaagcca
gccgccgtgctggaagcgctggtgcaggaattcgacgtggccaccgtgtacaccaacgaa
gattacgagccctacgccacgcggcgcgacgccgaagtgggggccctactaggccgccac
ggcgtggacttccaactttacaaagaccaggtaatcttcgccaaagacgagattatgacc
aaatcgggcactgtgcccaaggtgttcggggcctaccacaaaaccttcttggcccggctc
accgacgagatgctgttgccctacggctcgcgggaggcttttacgcaagcccgcttgcac
gctttgccgccggccgccggcccgcgccccacactggccagcatgggcttcgagcgcaaa
gagcagtacgtgcccactgccgacctgccggccgaagacgtggtgcgccaataccacaaa
acccgcaacacgcccgccttgcaagacggcaccacgcgcctttcggtgcagctgcgcttc
ggcaccgtcagcgtgcgccaggcgatgcgccaggccaaagcactgaacccaaagctgctg
gctgaaatcagctggcgcgacttctttatgatgctgctctggcactaccccaataccgcc
accgaagcctacgaccccaagatgcgggccgtgccttaccgcaaccacgaagacgagttc
agtgcctggtgcgagggccgcaccggctacccgctcgtggacgcgggcatgcgcgagctg
aacgccacgggctacctgcccaaccgcgtgcgcatgaccgtagccggctttctggttaag
cagttgttcatcgactggcgttggggcgaaaaatatttcgccgacaagctgctcgactac
gagctggccaacaacgtcggcaactggcagtggatggcgggcaccggggccgtctcggcc
ccctggttccgggtgtacagccccgccagccaaattgagcaagtggacccccaccgcgag
tacgtgcgccgctggattcctgaactggacaccccagcctaccccgcccccattgtggag
cacaaatttggccgtgaccgcgccgtggaagccctgcgcaaagcccgccaagaagccggg
tag
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