Hymenobacter sp. PAMC 26628: AXW84_16745
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Entry
AXW84_16745 CDS
T04961
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hyz
Hymenobacter sp. PAMC 26628
Pathway
hyz03030
DNA replication
hyz03430
Mismatch repair
hyz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hyz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AXW84_16745
03430 Mismatch repair
AXW84_16745
03440 Homologous recombination
AXW84_16745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hyz03032
]
AXW84_16745
03400 DNA repair and recombination proteins [BR:
hyz03400
]
AXW84_16745
Enzymes [BR:
hyz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AXW84_16745
DNA replication proteins [BR:
hyz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AXW84_16745
DNA repair and recombination proteins [BR:
hyz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AXW84_16745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
Motif
Other DBs
NCBI-ProteinID:
AMJ66897
UniProt:
A0A126PCQ2
LinkDB
All DBs
Position
3854856..3858539
Genome browser
AA seq
1227 aa
AA seq
DB search
MPVFSHLHSHTQYSLLDGQASIGALMKKAQADGMPAVALTDHGNMFGAFNFVAEANKYNV
KPIVGCEFYLVEDRHKKAFSREKGERDVRHHQLLLAKDQAGYHNLSKLCSLSFIEGSYSK
FPRIDKELLVQYHEGLIATSCCIGAEIPQTILFRSETEAEEKLKWWLNLFGDDYYIEIQR
HGLMNFDGTGKSQEDVNQVLLRLAHKHGVKVICTNDSHYVDQTDFAAHDLLLCVNTGEEH
SIPVGDIRTNYYTLLTTDGTVRYDLLDNLRQNHGRDERAQKQLRRIDEELQKPKPHTRFG
FANDQFYFKKQAEMNALFADVPHSVDNTNEIVDKITPPKLARDILLPNFPLPAQFANADE
FLRDLTFKGAFEGPKPRYSERTPEVEERLNYELRIIQTMGFAGYFLITQDFINHGRSVGV
AVGPGRGSAAGSAVAYCVGITNIDPIKYSLLFERFLNPERVSMPDIDIDFDDVNRQKVID
YVVQKYGKTQVAQIITFGTMAAKSSIKDVARAMELPLPQTNDLTKMVPEQVGTTLAKAFA
ENMELDMIRRDESPDNLKGQILRLAVQLEGSVRNTGIHAAGVIIAPDDITKYIPVSTSKD
SDLLVTQFDGKVIESAGMLKMDFLGLKTLTIIVDALRLIERNHAVKIDIDDIPLDDEKTY
ALYQRGDTIGTFQFESEGMRQYLKDLKPTNIEDLIAMNALYRPGPMQFIPNFINRKHGRE
EVVYPHELLKPILEYSQGIMVYQEQIMQTAQILAGYSLGGADLLRRAMGKKDMKKMALER
EKFVKGAGEIHKIPAKKASEVFDVMEKFAEYGFNRSHSAAYSVVAYQTGYLKANYPAEYM
AAVLTNNMGDIKKVTFFIEEARKQGVDVLGPDVNESLLKFNVNQEGKIRFGMAAVKGAGE
LAVECMVEEREKAGPYSDIFDFAKRVNLRTVNKKTFESLAQAGAFDDFGKHRRLYLDAPA
GDQPLIEKAMKLGQQHAAAKESSQHSLFGASAFGAVAAPLPKMHEMEPWTKTEQLRREKE
VVGFYLSGHPLDSYKLELDAYCTCGLEKVETHKNKEINVAGLITNVAFKTTKMGQSFATF
TLEDYETSISPALFRDDYTRFAPLINPRNYANEQVPPMFVRLKQELRRGTQDQWDLRILN
MQPLSEVAEKLSKGVRVRLDLRTVTGPMLDRLEEAIQAAPGRKRLEIQFAEPHEHLAVDM
FSRKFQIEPKVFIEKMQEMEMDACQLI
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttttctcgcacctccacagccacacccaatactcgctgctcgacggccaggcc
agcatcggggccctcatgaaaaaagcccaggccgacggcatgcccgccgtggccctcacc
gaccacggcaacatgttcggggccttcaacttcgtggccgaagccaacaagtacaacgtg
aagcccatcgtgggctgcgaattctacttagtggaagaccgccacaaaaaagccttcagc
cgcgagaagggcgagcgggacgtgcgccaccaccagctgctgctggccaaggaccaggcc
ggctaccacaacctgagcaagctctgctcgctgagcttcatcgagggctcgtactccaag
tttccgcgcatcgacaaggagctgctggtgcagtaccacgaggggctcattgccaccagt
tgctgcatcggggccgagattccgcaaaccatcctgttccgctccgaaaccgaggccgag
gagaagcttaagtggtggctgaacctgttcggcgacgactactacatcgaaatccagcgg
cacgggctgatgaatttcgacggtaccggcaaaagccaggaggacgtgaaccaggtgctg
ctgcgcctggcccacaagcacggcgtcaaggtcatctgcaccaacgattcgcactatgtg
gaccagaccgatttcgcggcccacgacctgctgctgtgcgtgaacaccggcgaggagcac
agcatcccggtcggcgacattcgcacgaactactacaccctgctcaccaccgacggcacg
gtgcgctacgacctgctggataacctgcgccagaaccacggccgcgacgagcgggcccag
aagcagctgcgccgcatcgacgaggagctgcaaaagcccaagccgcacacccgcttcggt
ttcgccaacgaccagttctacttcaagaagcaggcggaaatgaacgcgctgttcgccgac
gtgccgcacagcgtggacaacacgaatgagattgtggacaaaatcacgccgcccaaactg
gcgcgcgatattttgctgcccaacttcccgctgcccgcccagttcgccaacgccgacgag
ttcctgcgcgacctcaccttcaagggcgcgtttgaggggcccaagccgcgctactccgag
cgcacgccggaagtagaggagcgcctaaactacgagctgcgcatcatccagacgatgggc
tttgcgggctactttcttattacccaggattttattaaccacggccgctcggtgggcgtg
gcggtgggccccgggcggggctcggcggcgggctcggcggtggcctactgcgtgggcatc
accaacatcgacccgattaagtactcgctgctgttcgagcgcttcctgaacccggagcgc
gtgagtatgcccgacatcgacattgactttgacgacgtgaaccgccagaaagtcatcgac
tacgtggtgcagaagtatggcaaaacccaggtagcccaaatcatcaccttcggcacgatg
gcggccaaaagctccatcaaggacgtggcccgggccatggagctgcccctgcctcagacg
aacgacctcaccaaaatggtgcccgagcaagtgggcaccactctggccaaggccttcgcc
gagaacatggagctggacatgatccggcgcgacgaaagccccgacaacctcaagggccag
atcctgcggctagccgtgcagctcgaaggctcggtgcgcaacacgggcatccacgcggcg
ggcgtcatcatcgcccccgacgacatcacgaagtacatcccagtttcaacttccaaggac
tcggacctgctcgtgacgcagttcgacggcaaggtgattgagagcgccgggatgctgaag
atggactttctgggcctcaaaaccctgaccatcatcgtagacgccctgcgcttgatcgag
cgcaaccacgccgtaaaaatcgacatcgacgacattccgctcgacgacgagaaaacctac
gccctgtaccagcgcggcgacacgattggcacgttccaattcgagtccgagggcatgcgc
cagtacctcaaggacctgaagcccaccaacatcgaggacttgattgccatgaacgccctg
taccgcccgggccccatgcagttcatcccgaacttcatcaaccgcaagcacggccgcgag
gaagtggtgtacccgcacgagctgctcaagcccatcctagagtacagccagggcatcatg
gtgtaccaggagcagatcatgcagacggcgcagatcctggccggctactcgctgggcggg
gccgacttgctgcgccgcgcgatgggcaaaaaggacatgaaaaagatggccttggagcgc
gagaaatttgtgaaaggcgccggcgaaatccataagattccggcgaagaaggcctccgaa
gtgttcgacgtgatggagaagtttgccgagtacggcttcaaccgctcgcactcggccgcc
tactcggtagtagcgtatcagactggttacctgaaggccaactaccccgccgagtacatg
gccgccgtgctcaccaacaacatgggcgacatcaagaaggtgaccttcttcatcgaggaa
gcccgcaagcagggcgtggacgtgctgggccccgacgtgaacgaaagtctgctgaaattc
aacgtgaaccaggagggcaaaatccgcttcggcatggccgccgtgaagggcgcgggagaa
ctggcggtggagtgcatggtggaggagcgcgaaaaggcagggccctactccgacattttc
gacttcgccaagcgcgtgaacctgcgcaccgtgaacaagaaaaccttcgagagcctggcc
caggccggtgcgttcgacgacttcggcaagcaccgccgcctgtacctcgacgcgccggcc
ggcgaccagccactcatcgaaaaggccatgaagctgggccagcagcacgccgccgctaag
gaaagcagccagcacagcctgttcggggcctcggccttcggggcggtggccgcgccgctg
cccaagatgcacgagatggagccctggaccaaaaccgagcagctgcgccgcgaaaaagaa
gtggtgggcttctacctctcgggccaccccctggacagctacaagctggagctggacgcc
tactgcacctgcggcctggaaaaagtggagactcacaaaaacaaggaaatcaacgtggcc
ggcctcatcaccaacgtggccttcaagaccaccaagatgggccagtcgttcgccaccttc
accctggaggactacgagacgagcatcagcccggccctgttccgcgacgactacacgcgg
tttgcgccgctcatcaacccgcgcaactacgccaacgagcaggtgccgcccatgttcgtg
cgcctcaagcaggagctgcgccgcggcacccaggaccagtgggacctacgcatcctgaac
atgcagccgctgagcgaggtggctgaaaagctgagcaagggtgtgcgcgtgcgcctcgac
ctgcgcaccgtgacgggccccatgctcgaccggctagaggaagccatccaggccgcgccc
ggccgcaagcgcctcgaaatccagtttgccgagccccacgaacacttggcggtggacatg
ttctcgcgcaagtttcagattgagcctaaagtatttatcgaaaagatgcaggagatggaa
atggacgcctgtcagctcatctga
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