Hymenobacter sp. PAMC 26628: AXW84_18870
Help
Entry
AXW84_18870 CDS
T04961
Name
(GenBank) hypothetical protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
hyz
Hymenobacter sp. PAMC 26628
Brite
KEGG Orthology (KO) [BR:
hyz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hyz01011
]
AXW84_18870
Enzymes [BR:
hyz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
AXW84_18870
Peptidoglycan biosynthesis and degradation proteins [BR:
hyz01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
AXW84_18870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM_RLK
HTH_Tnp_1
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AMJ67258
LinkDB
All DBs
Position
complement(4364811..4366967)
Genome browser
AA seq
718 aa
AA seq
DB search
MKQGRIPAFRPGRLWRRLALALPLAAPVAAKAQQLPPLSTDTTKVPVLLLPDSLAVVPIV
PVDSVRLAWLQTPPTVRDLVGDRMSCIETDAPHQFNNAVMAYITLFTVRKRDYTQRVLER
ENLYFPLFEKYLAQYHLPTDLKYLAVVESSLIPTAKSPVGATGLWQFMGPTAGDLRLRRD
EWVDERMAPEKATEAACKHLRYLYGVFHDWELVLAAYNWGAGNVQRVMRRTGKKTFWDLY
PNLPAETRNYVPTFTAVMYSMKYAQQHGLHSDKLAYQRAEALDTLGLRGQAFDLHRLSVA
CGYSDSTYLARYNPELFRAGLPAGYRPYVVRYPATARAAFGDADRATLLAFCQPLAALPQ
PLAALPPRLDGVEPWSRPAPLLADATAADVAPRVRRIHHKVRRGETVAGLAERFDVSPGQ
LRRWNELTKKQTLKPGRTVVVLVPLPAARPPMVVAAVAPPAPRAVRALPSAEDVAARQAL
AAANALEVARVAAVAALEQQQATRLAKVRQRQEAAQHAQARIAAVQAAALAKTTASLAGR
KSAEPVALASALVETAATETLLASNEATLGGPVEVAETPTPKLRRAPAEAAARPRDTAAE
VEPTPTATASYVVRRGDNLTKLAQARGVSVAQLVAWNHLDAETVEAGQHLRFGPPAGAPA
KAASAHLAAVPKTHRVQPGDTLYNISRRFNVSVAVLRRLNHLTSDDVKLGQKLLVPQG
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggacgtatcccggcgtttcggcccggccgcctgtggcggcggctggcgctg
gccctgcctttggccgcccccgtggccgccaaggcacagcagctgccgcccctttctacc
gataccacaaaggtgccggtgctgctgctgcccgactcgctggctgtggtgcccatcgtg
cccgtcgattcggtgcggcttgcctggctgcaaaccccgcctaccgtgcgcgaccttgtg
ggcgaccggatgagctgcatcgaaaccgacgctccgcaccagttcaacaatgcggtgatg
gcttacatcaccctgtttacggtgcgcaagcgcgactacacgcagcgggtgctggagcgc
gaaaacctatattttccgctgtttgagaagtacctcgcgcagtaccacctgcccaccgac
cttaagtacctggccgtggtggagtcgtcgctgattcccacggccaaatcgccggtgggg
gccaccgggctctggcagttcatggggcccacggctggcgacctgcgcctgcgccgcgat
gagtgggtggacgagcgcatggcccccgaaaaagccaccgaagccgcttgcaagcacctg
cgctacctctacggcgtgtttcacgactgggaactggtgctggccgcctacaattggggc
gcgggcaacgtgcaacgggtgatgcgccgcaccggcaaaaaaaccttctgggacctgtac
ccgaacttgccggccgaaacgcgcaactacgtgcccaccttcacagctgtgatgtacagc
atgaagtacgcccagcagcacggcctgcactccgacaagctggcctaccagcgcgccgag
gccctggatacgctgggcctgcgcggccaggccttcgacctgcaccgcctgagcgtagcc
tgcggctattccgactcaacttacctcgctcgctacaaccctgagctgtttcgggccggg
ctgccggccggctaccggccctacgtggtgcgctaccccgccacggcccgcgccgctttt
ggcgacgccgaccgggccaccctgctagcgttttgccagccactggccgcgctgccccag
ccgctggccgcgctgccgccgcgcctcgacggcgtggagccctggagccgccccgccccg
ctgctggctgatgcaactgctgctgatgtcgcgccgcgcgtccggcgaatccaccacaag
gtgcgccggggcgaaaccgtggccggcctggccgagcggttcgacgtgagcccaggtcaa
ttgcgccgctggaacgagctaaccaaaaagcaaacgctgaagccgggccgcaccgtggtg
gtactggtgccgctgcccgccgcgcggccgccgatggtggtagcggccgttgctccgccc
gcgccccgcgccgtccgggccctgccctcggcggaggacgtagcggcccgccaggccctg
gccgctgccaatgcgttggaagtggcccgcgtggccgccgtggccgcgctggagcagcag
caagccacgcgcctggccaaggtgcgccagcggcaggaagctgcccagcacgcccaggcc
cggattgccgccgtgcaggccgcggcattggccaaaaccacggcctccctggccgggcgc
aaatctgctgagccggtagccttggcgtcagccctagttgaaaccgctgctaccgaaacg
cttctggctagcaatgaagcgacccttgggggccctgtggaggtagcagaaacccctacg
cccaagctacgccgggctccggcggaggctgccgcccggccgcgggatactgccgccgaa
gtagagccaacgcctactgccactgcaagctacgtggtgcggcggggcgacaacctgacc
aagctggcccaggcgcgcggcgtgagcgtggcccagctcgtggcctggaaccacctcgat
gccgaaaccgtggaagccggccagcacctgcgcttcggcccccccgccggggccccagcg
aaggcggcgtctgcgcacctcgccgcggtgcccaagacgcatagggttcagcccggcgac
acgctctataatatttcgcgccgcttcaacgtgagcgtggcggtgctgcggcgcctcaac
cacctcacttccgacgacgtgaagctggggcagaagctgctggtgccgcagggctag
DBGET
integrated database retrieval system
