Hymenobacter sp. PAMC 26628: AXW84_21145 Help Entry AXW84_21145       CDS       T04961                                  Name (GenBank) RNA polymerase sigma-54 factor   KO K03092   RNA polymerase sigma-54 factor Organism hyz  Hymenobacter sp. PAMC 26628 Pathway hyz02020   Two-component system hyz02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:hyz00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     AXW84_21145  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     AXW84_21145  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:hyz03021]     AXW84_21145 Transcription machinery [BR:hyz03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      AXW84_21145 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID LacI HTH_12 SF3b1 HTH_IclR Motif Other DBs NCBI-ProteinID:  AMJ67642 LinkDB All DBs Position complement(4894299..4895885) Genome browser AA seq 528 aa AA seqDB search MQRLDLKQLLSQKLSPQQIQFIKLLQIPTAELETRIKEEMEVNPALEEGDTDEPEDQDSG DDEDDRDEADADDPDAEFDSDNSTLDEDFEEPADVDDYDGPAEAPPEPEPAKEEGPDNAD LDLSDYLNDDEIAGYKMQGDGPGEEEEREMPLADTSGSLMDSLLDQLHFTQLGEREEAIG QQLIGSIDGDGYIRRDLAAIANDLAFSQNLEVTVPEIEAVLRVVQGFDPAGIAARDLPEC LLLQLERRPQDATTEHAEQIIGTLFDEFSKKHYARIQQKLDLEDDELKEAVGLILKLNPK PGGAGPTGPGKTQYLMPDFILTNDNGELSLTLNARNAPELRVSPAYTEMFRTYDKAAKKD QKMKEAVSFVKQKLDSAKWFIDAIRQRQNTLLRTMNAIVGLQRDFFIEGDETKLHPMILK DIAQQIGMDISTVSRVANSKSVQTEFGIYPLKYFFSEGIATDSGEDVSSREVKSILKDLI DKENKSRPLADDKLEKMLNARGYNIARRTVAKYREQLNIPVARLRKEL NT seq 1587 nt NT seq  +upstreamnt  +downstreamnt atgcaacgcctcgatttaaaacagctcctctcgcaaaagctcagcccccagcaaattcag ttcatcaagctgctgcaaatcccgacggcggagctggaaacgcgcatcaaggaggaaatg gaggtgaaccccgccctggaggaaggtgacaccgacgagcccgaggaccaggacagcggc gacgatgaagatgaccgcgacgaggccgacgccgacgacccggacgccgagtttgacagc gacaacagcacgctcgacgaagattttgaagagcccgccgacgtggacgactacgacggc cccgccgaggccccgcccgagcccgaacctgccaaggaagagggccccgacaacgccgac ctcgacctgagcgactacctcaacgacgatgaaatagccggctacaagatgcagggcgac ggccccggcgaggaagaggaacgcgaaatgcccctggccgacaccagcggctcgctcatg gactcgctgctcgaccagctgcacttcacccagctcggcgagcgggaggaagccattggc cagcagctcattggctcgattgacggcgacggctacatccggcgcgacctggcggccatt gccaacgacctggcgttttcgcagaacctggaggtgacggtgcccgaaatcgaggccgtg ctgcgcgtggtgcagggcttcgaccccgccggcatcgccgcccgcgacttgcccgagtgc ctgctcttgcagctggagcgccgcccccaggacgcgacgacggagcacgccgagcaaatc atcggcacgctgttcgatgagttcagcaagaagcactacgcccgcatccagcagaagctg gacctggaggacgacgagctaaaggaagccgtgggcctgatcctcaagctgaaccccaag cccggcggcgcgggccccacgggccccggcaaaacgcagtacctgatgccggacttcatc ctcaccaacgacaacggcgagctgagcctgaccctgaacgcccgcaacgcccccgagctg cgcgtgagcccggcctacaccgagatgttccggacctacgacaaggccgcgaagaaggac cagaagatgaaagaggccgtatcttttgttaagcaaaaattggattctgccaagtggttc atcgacgccatccggcagcggcagaacacgctgctgcgcaccatgaacgccattgtgggc ttgcagcgcgacttcttcatcgagggcgacgaaaccaagctgcacccgatgattctcaaa gacattgcccagcaaatcggcatggacatcagtaccgtgagccgggtagctaactctaaa tcagtacaaactgagtttggtatctatccattaaaatatttcttttcagaaggaatcgct accgattcgggcgaggacgtgtcgagccgcgaggtgaaaagcattctcaaagatttgatc gataaagagaataaatcgcgcccactggccgatgacaaattagagaagatgctgaacgcc aggggctacaacattgcccggcgcacggtggccaagtaccgcgagcaactgaacattcca gtggcgcggctgcgcaaggaattgtag

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