Helicoverpa zea (corn earworm): 124629541
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Entry
124629541 CDS
T08400
Name
(RefSeq) ATP-dependent RNA helicase me31b
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
hze
Helicoverpa zea (corn earworm)
Pathway
hze03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124629541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hze03019
]
124629541
03036 Chromosome and associated proteins [BR:
hze03036
]
124629541
Enzymes [BR:
hze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124629541
Messenger RNA biogenesis [BR:
hze03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
124629541
mRNA degradation factors
5'-3' decay
Decapping complex
124629541
Chromosome and associated proteins [BR:
hze03036
]
Eukaryotic type
Gene silencing
piRNA pathway
124629541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
124629541
NCBI-ProteinID:
XP_047018923
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All DBs
Position
4:8518352..8525436
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AA seq
442 aa
AA seq
DB search
MMTENRISSSNHVGNSMTSQNKGDVDKSIDDIGWKSKLKIPPKDRRIKTSDVTDTRGNEF
EEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV
DPKKDAIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVI
IATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMVISRLPKERQILLFSAT
FPLSVKQFMEKHLREPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSII
FCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRAGLCRNLVCSDLFTRGID
VQAVNVVINFDFPRMAETYLHRIGRSGRFGHLGIAINLITYEDRFALHRIEQELGTEIKP
IPKVIDPALYVARPDDDDSADK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccgaaaatagaattagttcaagtaatcacgtcggaaacagtatgaccagtcag
aataagggtgatgtcgataaaagtatcgatgacatcggttggaaatcaaaattaaaaata
cccccgaaagacaggagaataaagactagtgatgtaacagacacaagaggtaatgagttt
gaagagttttgcctgaaacgtgagctgctgatgggcatttttgagaaaggatgggaaaaa
ccttcccccattcaagaggcttctattcctatcgcactcagtggtaaagatgtccttgca
agagctaaaaatggaactggcaaaactggcgcttattgtattccagttttagaacaggtg
gatcccaaaaaagatgctattcaagctttaattgtggtaccaactagggagttagcgctc
cagacatcacaaatttgcattgaactggcaaaacacacagatattcgtgtaatggttact
acaggaggtactaatctccgggatgacattatgcgtatatatcaaaatgttcaagttatt
atagctacgccgggtcgtatgattgatctcatggataagcaagttgccaagatggaccag
tgcaggatgctggttcttgatgaggcagacaaacttctttctcaagacttcaaaggaatg
cttgatatggttatttcacgattacccaaagaacgccagatcttgctgttctctgctacc
ttcccactgagtgtgaaacagttcatggaaaaacatttaagagagccgtatgagattaat
ctcatggaggaattaacactgaaaggagttacgcagtactatgcatttgtacaagagagg
cagaaagtgcattgtttaaatacacttttttcaaagttgcaaataaaccagtctataata
ttctgtaattccactcagcgtgtggagttgctcgcgaagaagataacagagcttggttat
tgctgttactacattcatgcgcgcatggcgcaggcgcaccgcaatcgtgtgttccacgac
ttccgcgcgggcctctgccgcaacctcgtgtgttctgacctcttcactagaggtatcgac
gtgcaagccgtcaacgtcgtcatcaattttgatttcccgcgtatggccgagacctaccta
catcgtatcggccgctcgggacgcttcggccacttgggtattgccatcaatctaatcacg
tatgaagaccgtttcgccctgcaccgcatcgagcaggagctgggcacggagatcaagccg
atcccgaaggtgatcgaccccgcgctgtacgtggcgcgtccggacgacgacgactcggcc
gacaagtaa
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