KEGG   Helicoverpa zea (corn earworm): 124629740
Entry
124629740         CDS       T08400                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1 isoform X1
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
hze  Helicoverpa zea (corn earworm)
Pathway
hze03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hze00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124629740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hze03041]
    124629740
   04121 Ubiquitin system [BR:hze04121]
    124629740
Spliceosome [BR:hze03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    124629740
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    124629740
Ubiquitin system [BR:hze04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    124629740
SSDB
Motif
Pfam: SART-1 HIND CHD5
Other DBs
NCBI-GeneID: 124629740
NCBI-ProteinID: XP_047019228
LinkDB
Position
4:13755907..13766096
AA seq 760 aa
MGSKKHKKESKKKKHRSRSRSPLENEEVRERKRHRKHKDRKRDRSPDVEEVPVDSHLSKE
AAPRSQSRSSSEERDRRAREQHRAQKDEADYRSREKSSESERRTADRSQSPPSTSGGAQE
SLSIEETNKLRAKLGLKPLERAEKPAEDGKIKDDLGEFYHKPAANISQQKKSEKIREKLE
LRKEKRKIEQKLQTTLLAEESDEDDAAAWVKRSREIDKQKREAAKRAAMLDEMDAVFGVS
ALVEQESREERLRSYSHAQLRGLRVAHDIDAIADEREVVLTLADKEVLAEDNEDVLVNVN
IVDDERTKKNLLEAKKARAGYRAYDDEAELQAAALGFQRPVLSKYDDEIHKDRDAKTRGF
LIGDDSVLEAKKFRDMMRQERLQGGGDKRLESLQLPALQLACDYLDEHEIQAKFKKTKRK
GKIRKKAKHEPIDVDDYDAATAPLDTDDTEVKPEQLTQPAEVDEEETEPDTELQAALARA
RRLRQAELAEEQQFKVPKVEEILERVKEEEPAEEGSSMVLDATAEFCRTLGDIPTYGLAG
NRDHHAEIMDFEREDMEVEPEVDHNAGAWSRVDVDNEKPADLAAGSCVGLGAEPALGAGV
WGALQLALSKGYLERAGAAPMPSSAAKHLLAARHYSIEDKTYGEDDKYGRRERGGHSGPL
QDFREKNNFRPNIKLEYVDDDGRPLCPKEAFRYLSHKFHGKGPGKNKQEKRIKKAVQEGL
MKKMSSTDTPLGTLQMLQDKQRETQSPYIVLSGVKRDANN
NT seq 2283 nt   +upstreamnt  +downstreamnt
atgggttccaaaaaacataagaaggaatcgaaaaagaagaagcataggagtcggtcccgt
tcgccgctggaaaacgaggaagttcgtgaacgtaaacggcatcgcaaacacaaggatcgc
aagcgagaccgctccccagacgttgaagaggtgccagtggactcgcacctgagcaaggag
gcggcacctcgctcccagagccgcagcagcagtgaggagcgcgaccgacgcgccagggag
cagcaccgcgcacagaaagatgaagctgactaccgcagtagagagaagagctcagaaagc
gaacgccgcacagctgatcgctcgcagtcaccaccatccacaagtggtggagcacaagag
agcctgtccattgaggagaccaacaaactacgtgccaagctcggcctcaagccactggag
cgagctgaaaagcctgcagaggatggtaaaattaaagacgatctcggcgaattctatcac
aaacctgcagcgaacatatcacagcagaagaaatcagaaaagatacgagagaagctggag
ctgcgtaaagagaagaggaagattgaacagaaattacaaacaacactcctggcagaagaa
tctgatgaggacgatgctgccgcctgggtgaagcgttcgcgggaaatcgacaagcaaaaa
cgtgaagcggctaaaagggcggcgatgctggacgagatggacgcggtgttcggcgtgtcg
gcgctggtggagcaggagtcgcgcgaggagcggctgcgcagctacagccacgcgcagctg
cgcggcctgcgcgtcgcgcacgacatcgacgccatagcggacgagcgcgaggtggtgctg
acgctggccgacaaggaggtgctggcggaggacaacgaggacgtgctcgtcaacgtcaac
atcgtcgacgacgagaggaccaagaagaatcttctggaagcgaagaaggcccgcgccggg
taccgcgcgtacgacgacgaggcggagctgcaggccgccgcgctcggcttccagcgcccc
gtgctcagcaagtatgatgacgagatacacaaggacagggacgccaagacacgcggcttc
ctcatcggagacgacagcgtcttggaagctaagaagttccgcgatatgatgagacaagag
cggctgcaaggcggcggtgacaagcggctggagtcgctgcagctgccggcgctgcagctc
gcctgcgactacctggacgagcacgagatacaggctaagttcaagaagaccaagaggaag
ggcaagatacgcaagaaggccaaacacgagcccattgatgtggacgactatgacgctgcc
accgcgccgctggacactgatgatacagaggtgaagccggagcagctgacacagccggcg
gaggtggacgaggaggagacggagcccgacaccgagctgcaggccgcgctggcccgcgcg
cgccgcctgcgccaggccgagctcgccgaggagcaacagttcaaagtgcccaaggtagag
gaaatcttggagcgagtgaaggaggaggagccggccgaggagggctcgtccatggtgctg
gacgccacggccgagttctgccgcacgctgggcgacatccccacgtacgggctcgccggc
aaccgcgaccaccacgccgagatcatggactttgagcgcgaggatatggaggtggagccg
gaggtggaccacaacgccggcgcctggagccgcgtcgatgtcgacaacgagaagcctgct
gacctcgctgcagggtcgtgcgtggggctgggggcggagccggcgctgggcgcgggcgtg
tggggcgcgctgcagctggcgctcagcaagggctacctcgagcgcgccggcgccgcgccc
atgcccagctccgccgccaagcatctgctcgccgcccgccactactccatcgaggacaag
acttacggtgaggacgacaagtacggccggcgcgagcgcggcggtcactcggggccgctg
caagacttccgcgagaagaacaacttccgaccgaacatcaagctggagtacgtcgacgac
gacggccgcccgctgtgccccaaggaggccttccgctacctctcgcacaagttccacggc
aagggccccggcaagaacaagcaggagaagaggatcaagaaggctgtgcaggaggggctg
atgaaaaagatgagctcgacggacactccgctgggcacgctgcagatgctacaggacaag
cagcgcgagacgcagtcgccgtacatcgtgctcagcggcgtcaagcgcgacgccaacaac
tga

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