KEGG   Helicoverpa zea (corn earworm): 124629800
Entry
124629800         CDS       T08400                                 
Name
(RefSeq) DNA repair endonuclease XPF
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
hze  Helicoverpa zea (corn earworm)
Pathway
hze03420  Nucleotide excision repair
hze03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:hze00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    124629800
   03460 Fanconi anemia pathway
    124629800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hze03032]
    124629800
   03400 DNA repair and recombination proteins [BR:hze03400]
    124629800
DNA replication proteins [BR:hze03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    124629800
DNA repair and recombination proteins [BR:hze03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     124629800
SSDB
Motif
Pfam: ERCC4 Rhodanese
Other DBs
NCBI-GeneID: 124629800
NCBI-ProteinID: XP_047019320
LinkDB
Position
4:9421862..9427947
AA seq 891 aa
MESTDTNTADAEKGLDDVELKYTLLPFERQIFVDAFEKEALVIMAKGINYNNIISNLLWI
YKDPEHLVFVLNSGEQEERYFTEKFGLSPLPNLGTDREKAYLEGGIHFVSTRILVVDLLK
NRVPISHITGIIVLRAHTVLESCQEAFALRLYRQNNKTGFVKAFSNSPISFTFGYNHVEK
VMRALFVTELFLWPRFHGSIIKSLKSRQAEVVELHVPLTTNMRFIQTCLLDIINYTVKQL
KSINRTLDMQEITTENCITKKFHKILQSQLDCVWHQLSTRTKEYIQDLKVLRSMAVNLID
DDAVSFHALVSKYSTQEYAQVNSGWILLESAEQLFRIARGRVFNHKQEFDPEHCPKWKCL
SDLLSKEIPEEVKKKDGANLNNTKILVLCQDNKTCSQLNNFLTMGPHKYLFYMAFRRDLT
INSVSSKYTNLKKPKTEDTNDKDAKRKEEVKDADNKEEEDFNADETKSNYLLTLTQCNAQ
AEAVDASMFEPISQMENLDFTQLEIERPVICIRTFKESGCNFSLERTLEALRPEYVILYH
CDVAAVRQIELFECRKRNDEPKTKVYFVIHDKTIEEQSYLTTLKREKQAFELLIQTKSVM
VVPSYQDGKTDEYFNLNVEHEDNALDTRKAGGQNQQKEKPAVIVDMREFRSDLPALLHKK
GINIEPVTIAIGDYILTPDICVERKSISDLIGSLNSGRLYTQCTQMCRNYSRPILLIEFD
QNKPFNLQGHFVVSTDISGADIQQKLQLLTIHFPRLKLVWSPSPYATAELFYELKQGRKN
PNVAEALALSGDNTAEDMHYERYNILVHDFVQKLPGVNSKNIARIMDRGKSLDHLITLSQ
DELQTLIENKNDAATLHSILHVKPRPVDANKDDKSYGKKKFGGKPFQNKRK
NT seq 2676 nt   +upstreamnt  +downstreamnt
atggaatcaactgacacaaacacagctgatgctgaaaaaggcttagatgatgttgaacta
aagtatactttactgccattcgaaaggcaaatatttgtagatgcttttgaaaaagaagca
cttgtcatcatggctaagggaattaattacaataacataatatcaaatttactgtggatt
tataaagaccctgagcatttggtttttgtgttgaacagtggagaacaagaagaaagatat
tttactgaaaaatttggattatcacctttgcccaatcttggaactgatagagagaaagca
tacttagagggagggatacattttgtttcaactcgcattttagttgtggacttgttgaag
aacagagttcccatttcccatataacgggcatcattgttttgagagcacatactgttcta
gaatcatgccaggaagcttttgcattgagactctacagacaaaataataagactggtttt
gtgaaggcattttcaaattctcctatatcatttacatttggctacaatcatgtggagaag
gttatgagggcattatttgttactgagctatttttatggccaaggttccatggctcaata
atcaaaagtctcaagagtagacaagcagaagtggtggagttgcatgtgccgctgaccacc
aacatgcggttcattcagacttgcttgcttgatatcataaactacactgtgaaacaactc
aaaagcatcaataggactttggatatgcaggaaataacaacagaaaactgcataacaaaa
aagttccacaaaattcttcagtcacagctagactgtgtttggcatcagttaagtacaaga
acaaaagagtacatacaagatctcaaagtactgcggagcatggctgttaacttgatagat
gatgatgctgtttcattccatgctttagtaagtaaatacagcacacaagaatatgcacag
gtcaactctggatggatacttttagaatcagctgagcagttattccgaatagccagagga
agagtgtttaatcataaacaagaattcgatccagaacattgtccaaaatggaaatgcctc
agtgatctactgtcaaaagaaatacctgaagaagttaagaaaaaagatggagcaaaccta
aataatacgaaaatattagttctttgtcaggataacaaaacatgttcccaattaaataat
tttctaacaatgggcccacataaatatctattttacatggcgtttagaagagacctcact
ataaatagtgtttcatctaaatatacaaatctgaagaagcctaaaactgaagatacaaat
gataaagatgcaaaacgtaaggaagaagtgaaagatgctgacaataaagaagaggaagat
tttaatgcagatgaaactaaatctaattacctgctaactttaacacaatgtaatgcccaa
gctgaggcagtagacgcaagtatgtttgagccaatttcgcagatggaaaatttagatttt
actcaacttgaaatagagaggcccgttatttgcattcgaacgttcaaagaaagtggctgc
aacttttccctggagcgtacattagaagcgttgcggccagagtacgtgatcttataccac
tgtgacgtcgccgcagttagacaaatagaactattcgagtgccgcaaaagaaacgacgaa
cccaaaactaaagtttactttgtaattcatgataaaacaatagaggaacaatcctacctt
accactctgaagagagagaaacaagcttttgaattattaatccagacaaaaagtgtaatg
gtagtgccatcatatcaggatggcaagacggacgagtattttaacttgaatgtagaacat
gaggacaatgccttagacactcggaaagcaggtgggcaaaatcagcaaaaagagaagccg
gcagttatcgtagacatgagagaatttcgttcagatctgccagccttacttcacaagaag
ggcatcaacattgagcctgttacaatcgccattggtgactacatacttacaccggacatc
tgtgttgaaaggaaatctatttccgatttgattggatcccttaattctggccgactctac
acgcaatgcacccaaatgtgtcgaaattatagtcgccccattcttcttattgaattcgac
caaaataagccatttaatttacagggccacttcgtagtatcaactgacatatcaggcgca
gacatacaacaaaagcttcaactgctcaccatacacttccctcggttgaagctggtatgg
tctccaagcccctatgctactgcagaattattttatgaactaaaacaaggtagaaaaaat
cctaacgtagcagaagctctagctctcagtggcgataacaccgccgaagatatgcattac
gagcgatacaacatcctagttcatgattttgtgcaaaagctacccggagtcaactcgaaa
aatatcgcaagaattatggatcgaggcaaatcgttggatcacctcattactttatcccaa
gatgagttacaaactttgatagagaacaaaaatgatgcagcaaccttgcattccattcta
cacgtcaagcctcgccccgtagatgcaaataaggacgacaaatcctatggaaaaaagaaa
tttggcgggaagccgttccagaataaaagaaagtga

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