Helicoverpa zea (corn earworm): 124630238
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Entry
124630238 CDS
T08400
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
hze
Helicoverpa zea (corn earworm)
Pathway
hze03013
Nucleocytoplasmic transport
hze03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124630238
03015 mRNA surveillance pathway
124630238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hze03019
]
124630238
03041 Spliceosome [BR:
hze03041
]
124630238
Messenger RNA biogenesis [BR:
hze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
124630238
Spliceosome [BR:
hze03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
124630238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
124630238
NCBI-ProteinID:
XP_047019965
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All DBs
Position
5:6473668..6481571
Genome browser
AA seq
938 aa
AA seq
DB search
MMMYTGTSTEQDTRFSDKEKKLMKQMKFGDCLTQQVDMSKVKLDVLKPWITQKITEILKM
EDDVVIDYVNNQLEEKFPCPKKMQINLTGFLNGKNARLFMGELWELLLSAQASENGIPET
FTQQKKEEIKKRMEEQQKDKDKDKDRRRSRSRSRSRRRSRERRRSRTRSRDRSSDRKHRN
GGSPRRSRRRSRDRSSQSKSSHVEDNKAAEPKENGKSPEKKEEPEVKEEVNHNTSNDTTK
DESKENVLKEDKTEDEGQKSRSASPEKSAGDKPAEDKPAEKARRSSSERRSTSASSRGSA
KKRSSHKKRQYRSNRDSSTSVSPRRSSRRERSKSRRRSSRRRSLERRERERERERERERE
RRRRERERRERSRERRRSLERRRRSRSRSRRRGTRERSRDRRRSRSRRRSASRSRRRSGR
RSRDRRSRDRRSRDRRSRDRSRERRSKDRTKDRRSRDRKSRDRRSSDLIKERLEKSVSIP
RKENLEKLHKKSSERVSLPREQSKERAVSSSSRESSVANEKPVPTNDEQAKPAQSSDDEE
REDIIAIPTLREFSKSLSRTPSPFLRKHEIEHKKSDRSGDDASVKEQNDEESKPREVKKG
KRKTQQSESESESSEEVPKSKAKPKVKRKDKATSKKTKKPKKESSSSESDSEDSSSSDSE
DDRKKKSKKTAKKKLAKKSRKKRARSSSSESSSEEEVKHKSSKSKQKNIPEESDGDKKSK
KRNKDTTLDHSRSEKSDSKQSKSKKIENSDDSRDDSSDSDEKSSKKKVVKRDTSSEKETR
RSKKLDASKERAVSPEGVKSRKAEEKVVKSKHSEEVKSKSRDDTEKKAKKREKEESSSDS
DQVSKKKARKKVSDSESESDSDEPKKSKKAKKHKKHSKKHKKHKKHKKASKKKDDSSDSD
EAEEEEEEGKVNNEDLEKKLRERALKSMKKQTSVSGSD
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgtacacgggtacaagtacggagcaggacacccgcttcagcgacaaggagaag
aagctgatgaaacagatgaagttcggtgactgtttgactcagcaggtggacatgtcgaag
gtgaagctggacgtgctaaagccctggatcactcagaagatcacagaaattctcaagatg
gaagatgatgtagtcattgactatgtcaacaaccagcttgaagagaagttcccttgtccc
aagaaaatgcagatcaacttaactggattcttgaatgggaagaatgcgcgactcttcatg
ggtgagctgtgggagctgctgctgagtgctcaagccagtgaaaatggaatcccggagacc
ttcacacagcagaaaaaagaagagattaagaaaagaatggaagaacagcagaaggacaag
gacaaagacaaggatcggcgcaggtcgcggtctcgatcgcggtctcggcgtcgttcccgg
gagcggcggcgctcgcggaccaggtctcgcgaccgatcttctgataggaaacaccgcaac
ggaggcagcccgcgtcgctcgaggaggcgtagccgcgatagaagcagccagtcgaagtct
tcacatgtcgaagataataaagcagctgagcctaaagaaaatggaaaatctccagagaag
aaagaagaaccggaggttaaggaggaggtcaaccacaacacgtcaaatgacacaactaag
gacgagagtaaagagaatgtcctcaaggaagataaaactgaagatgaaggacagaaatct
cgttctgcttcacctgaaaagtctgccggcgataagcctgccgaagataaaccagctgag
aaagccaggcgctcatctagcgaaagacgatccacgtctgcatcatcacgtggtagtgca
aagaaaagatcatcgcataagaaacgtcagtatcgctctaatcgcgattcatcgacgagc
gtcagtcccagacgtagttcccgcagagaaagaagcaagtctcgacgtcgcagcagccga
cgccggtcgttggagcgccgcgagagggaacgtgaacgcgagagagagcgagaaagggaa
cgcagacgacgggaaagggagaggagagaaaggtcccgcgaacgtcgtcgctctctggag
cgtcgcaggcggtcacgctcgcgttcacgcagacgcggtaccagggagaggtctcgtgat
cgccgacgttcccggtcccgcaggcgctcggcgtcgcggtcgcggcggcgctcggggcgt
cgctcgcgcgaccgccgctcccgcgaccgacgctctcgcgacaggcgctccagggatagg
tctagggagaggaggtccaaggatcgcaccaaggacagaagatcgagggacaggaagtca
cgtgatagaagatcaagcgacctaatcaaggaacggttggagaagtctgtctctattcct
cgtaaagaaaacttggagaagctgcataaaaagtcatctgaacgagtatcactgccgcgc
gagcagtctaaagaacgagctgtatctagttcgagtagggaatcttctgtcgccaatgaa
aaaccggttccgacaaacgatgagcaggctaaaccagcacaatcatctgacgacgaagaa
agagaagacatcattgctattccaaccttacgtgaattttctaagagtttatctcggacc
ccatctcctttcttaagaaaacatgaaattgaacataagaaatcggataggtctggcgat
gatgcatctgtgaaagaacagaatgatgaggagtctaagcctcgagaagtgaagaaagga
aaacgcaaaactcaacaatctgaatcagaaagcgaaagtagtgaagaagtacctaaaagc
aaggctaagccaaaggtcaaacgcaaagataaagccacttccaaaaagacaaagaaaccc
aaaaaagaaagctcatcaagtgaaagtgactccgaagatagttcgtcaagtgattctgaa
gatgataggaagaagaagagcaaaaagactgctaagaagaagttggcaaagaagtcacgt
aagaaaagagcccgttcctctagttcggagtcaagttcggaagaagaagtcaaacataag
agctcgaaatctaagcaaaagaacattccagaagaatctgatggggataaaaagtcaaag
aaacgtaacaaagataccacccttgatcactctaggtcagaaaagagtgacagtaagcaa
agcaagtctaagaaaattgagaattctgatgactcgcgtgatgacagttccgacagtgat
gagaagtctagcaagaagaaagttgttaaacgcgatacaagttctgagaaggaaacaaga
cggtcaaagaaactggacgcatctaaagaacgtgctgtttcacctgaaggcgttaaaagt
aggaaagcagaagagaaagttgtgaaatcgaagcattcagaggaagtaaaatctaagtca
cgtgatgatactgaaaagaaagctaagaaacgtgaaaaagaagaatcttcttcagacagt
gatcaggtatcaaagaagaaggctaggaagaaggtatctgattcagaatcggaatccgac
agtgatgaacctaagaagtctaaaaaagctaaaaagcataagaaacattctaagaagcat
aaaaaacacaagaaacataagaaggcttcaaagaagaaggatgactcttcagacagtgac
gaagctgaagaggaagaagaggaaggcaaggtgaataacgaagatttagaaaaaaaactt
cgtgaaagagcgttgaaatcgatgaaaaaacaaacgagtgtttcagggtcagactaa
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