Helicoverpa zea (corn earworm): 124630876
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Entry
124630876 CDS
T08400
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
hze
Helicoverpa zea (corn earworm)
Pathway
hze03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124630876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hze03041
]
124630876
Enzymes [BR:
hze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
124630876
Spliceosome [BR:
hze03041
]
Complex C
Other components
Step II factors
124630876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
GIPC1_GH2
Flavi_DEAD
nSTAND3
Sigma54_activ_2
AAA_30
AAA_16
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
124630876
NCBI-ProteinID:
XP_047020868
LinkDB
All DBs
Position
6:1471117..1477738
Genome browser
AA seq
1275 aa
AA seq
DB search
MDEVAKLEHLSLVSKVCTELDNHLGLNDKDLAEFIIDIADKNPAFDSFKKALIENGAEFS
DSFMTNLLRIIQHMKPSNTTQKAETSQEHSNPLANKFPGLAIPNEKPPKFSSDEESEEED
EKSTKRLTAKEIFKEESKADISDSVVDQAMAELEALAPSQGGPGKESKKDIPKEDIKKRE
RSHSRDRKDVSRRRERSRERDRDRKSRRSRSRDKRSSSRDRRSRSRDRRSRSRGRRSRSR
NRDRDRRKRSRSRPTSSRHRSRDRQRRSKSRGRTSPSRGRSSPARGKRSPSREREHKYDY
GKKSRKRSPEVEMSDDPEPGKIYNGRVANIVPFGCFVQIEGVRKRWEGLVHISQLRSEGR
VTNVSDVVNRGDKVKVKVISVTGQKVSLTMKDVCQETGKDLNPTSHAHLEAEREGRNPDR
PPPNATVLAGLQGGLDPDEDSSRKRVTRISSPERWEIKQMISSGVIDKSELPDFDEETGL
LPKDEDGEADIEIELVEEEPPFLQGHGRALHDLSPVRIVKNPDGSLAQAAMMQSALSKER
REQKMIQREQEMESLPMGLNKNWIDPLPESDGRALAANMRGTGITPQDLPEWKKHVIGGK
KSSFGKKTNLSLLEQRQSLPIYKLRDELTKAVADNQILIVIGETGSGKTTQITQYLAECG
LTARGKIACTQPRRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTSPETVIKYMTDGML
LRECLMDLDLKTYSVIMLDEAHERTIHTDVLFGLLKQAVQKRPELKLIVTSATLDAVKFS
QYFFEAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDILLFLTGQEEI
DTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFEPAPPGSRKVVIATNIAETSL
TIDGIYYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKCYRLYTER
AYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVESLIMALEQLHSLSA
LDSEGLLTRLGRRMAEFPLEPNLSKILIMSVALQCSDEILTIVSMLSVQNVFYRPKDKQA
LADQKKAKFNQPEGDHLTLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIM
DRHKLDVVSAGKNTVRIQKTICSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQP
EWVIYHELVQTTKEYMREVTTIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLYNKYE
EPNAWRISRVRRRRN
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagttgcgaaattagaacacctttctttggtgtcaaaggtttgtacagagctg
gacaatcatttaggattgaatgataaagatttagctgaattcatcattgacatagctgac
aaaaatcctgcttttgactctttcaagaaggcacttattgaaaatggagcagaattttca
gattcctttatgactaacttgttacgtatcatacagcatatgaaacctagcaacacaaca
cagaaagctgagactagtcaagaacattcaaatccacttgccaataagtttccaggactg
gctatccctaatgagaagcctcccaaattttcttcagatgaagaaagtgaggaagaagat
gagaagtcaaccaaaagactgacagctaaagaaatattcaaagaggagtcaaaagctgat
ataagtgactcagtggttgatcaagcaatggcggagctagaagcattagctccatcacaa
ggtggtcctgggaaagaatccaaaaaagacattcctaaggaagatataaaaaagagggaa
agaagccacagtagagaccgcaaagatgttagtaggagaagggaaagatccagagagaga
gatagggatagaaaaagcaggcgtagcaggagtagagacaagagaagtagtagtagggat
aggaggagtcgcagtagagacaggagaagtcgcagcagaggccgcaggagtagaagtcgt
aacagggacagagatagaaggaagaggtccaggagccgccccacatccagtcgtcacagg
tctagagacaggcaaagaagatccaagtctagaggaaggacatctccatccagaggaaga
tcatctccagctcgaggcaagaggtctccgtctagagaaagggaacataaatatgactat
ggcaagaagtccaggaagaggagtcctgaggttgagatgagtgatgatcctgaaccaggg
aagatctacaacgggcgagtggcaaacatagtaccatttggatgctttgtacaaatagag
ggagtgaggaagaggtgggaaggtttggtacatatctcacagctgcggtcagagggcaga
gtgaccaatgtctctgatgttgtcaatagaggggacaaagttaaggtcaaagtaatatca
gtgactggacagaaagtatctctcaccatgaaggatgtgtgtcaagaaactggcaaagat
ctgaatccaacatcacatgcacatttggaggctgaacgcgaaggtcgtaatcccgatcgc
cccccaccgaacgccacagtgttagctggtctccagggaggcctggaccctgatgaagac
tcaagtcgaaagagagtcaccaggatctccagtcctgagagatgggagattaaacagatg
atatcatcaggagtaatagataaaagcgagctacccgactttgacgaggaaacaggtctg
ctaccaaaagacgaagacggcgaagctgatatcgagattgaactcgttgaagaagaacct
cctttcttacaaggacatggccgtgctctacacgacctgtcgccagtcaggattgtcaag
aaccctgacggttctctcgctcaagccgccatgatgcagtctgctctatctaaggagagg
agggaacagaagatgatacaaagagaacaagaaatggagtccttacccatgggtctgaac
aagaactggatagatcccctcccagaaagcgacggtagagcattagctgccaacatgaga
ggtactggcataactcctcaagatttaccagagtggaagaagcatgtcattggcgggaag
aagtcttcatttggcaagaagacgaacttgtcgcttttagaacaaaggcagtcgctgcct
atttataagctgagagacgagttgactaaggccgtagccgacaaccaaatcctcatagta
atcggggagacagggtccggtaagacgacacagatcacccaatatttagcggagtgtggt
ctaacagctcgcggcaagatcgcgtgcacgcagccgcgtcgtgtggccgccatgtccgtc
gctaagcgtgtcgctgaagagttcggatgtcgcctcgggcaggaggtcgggtatactatc
cgttttgaagattgtaccagtcctgaaacggttatcaagtacatgacagacggtatgttg
ctccgcgagtgcctcatggacctggacttgaagacgtactccgtcatcatgttggacgag
gctcacgagcgcaccatccacacggacgtactcttcggactactcaagcaggccgtccag
aaacgaccagaactcaaactgatcgttacctcagctactttagacgctgtcaagttctca
cagtacttcttcgaagcacccatctttaccatccctggtcgaaccttcccggtcgaagtt
ttgtacaccaaagaacctgagacggattatcttgatgcatccctcataactgtgatgcag
atacatttgagagagcctcccggggatattttgctgttcttaactggtcaagaagaaatt
gacaccgcgtgcgagattctgtacgagagaatgaagtctctaggtccggatgtaccagag
ctgatcatcttaccggtgtactcagcgctgccttccgaaatgcagacgcgtatcttcgag
cctgcccctcccggctccaggaaagtcgtcatagctaccaatattgcggaaacatcgctg
actatcgacggaatttattatgttgtcgatcctggatttgtgaagcagaaagtttataat
tcgaagactgggatggactctttggttgtgacgcctatttcacaagcagcggcaaaacag
cgggcgggtcgtgccgggcggacgggcccgggcaagtgctaccgactgtacacggagcga
gcctacagggacgaaatgttacccacaccggtgcctgaaatacagcgcaccaacctcgcc
accactgtgctgcagttaaagacgatgggtatcaacgacctgctacacttcgacttcatg
gacgcgccgcccgtggagtcgctcatcatggcgctggaacaactgcactcactgtccgct
ctcgattctgaaggactactcaccaggctgggccgcaggatggccgaattccctctcgaa
ccgaacttatcaaagatcttaatcatgtcagttgccctgcaatgttctgacgagatcctc
accatagtttcaatgctgagcgttcaaaacgtgttctaccgtcccaaagacaagcaagcg
ctggctgatcagaaaaaagctaagtttaaccagccagaaggtgatcatctgacgttactg
gctgtttataatagttggaggaataataagttctctaacgcatggtgctatgagaacttc
gtgcagatacgtacgctaaagagagcacaggatgttcggaaacagctgctgggaattatg
gatagacacaaactggatgtggtgtccgcgggcaagaacacagttcgtatccagaagacg
atatgttccggtttcttcaggaacgccgctaagaaggatccgcaagaggggtacagaact
ctcgtcgacagccaagtagtttacatacatccttctagcgcgctctttaataggcaacct
gaatgggtcatctaccacgagctcgtccaaactacgaaggagtacatgcgcgaagtgacc
accatcgatcctaagtggctggtggagttcgcgccagcattcttcaagttctccgaccct
accaaactgtccaaattcaagaagaaccagagattggagccgctgtacaacaaatatgaa
gaacccaacgcttggagaatatctagagttcgcaggagaaggaattag
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integrated database retrieval system
