Helicoverpa zea (corn earworm): 124630985
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Entry
124630985 CDS
T08400
Name
(RefSeq) nipped-B-like protein B
KO
K06672
cohesin loading factor subunit SCC2
Organism
hze
Helicoverpa zea (corn earworm)
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hze03036
]
124630985
Chromosome and associated proteins [BR:
hze03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
124630985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
TPR_DNAAF5
Motif
Other DBs
NCBI-GeneID:
124630985
NCBI-ProteinID:
XP_047021004
LinkDB
All DBs
Position
6:7090113..7107977
Genome browser
AA seq
1967 aa
AA seq
DB search
MNERDIPSVPITTLAGVASLTDLLPVLPLPTPLPATLNNKSQLFHPRVAEEAAILLATRD
ENLVSLLIQSLMQTSVSHIDLKDDVIANSSNPPTPQPLPELLRAILSVNPNVFEQQPRTH
WGPNCHSHHKFNGISPNTVPSSPSSLGTASIPNQQLLATPSQSSPHVNMGSPPSQARPGN
QLNNTAQNSVSPIWNSGNSSNMYASPMSNTSSSNPQNGGFYNSLVQDNSNYGTNLNEEKD
PLSMSPSNQPDQQRLLMQLHEKTFEQDGNVRTGQSPAQASVAPSPLRLEPQVPLPSMGAP
YAPQQQAQNSSQDKQDPSKSTGVTNNRYPVVKLGRLSEGLLKKHDFTTEERSRKNSALES
DSDDNVPLKTKSNSGTPTVDKEREAIDIAREKNWEAVKRKHEEASKREEAEAAIVRPKLR
KVERRLVPVLEMLSVDELMETNTYQRFNKLIESVFEAIDDDILITDEMEGTDIPEELLLP
RYQLQELCSEAAKLKNLGAMEAIPSDRLVRLLNIMEKNIRAAEKMSLVSDPEDSEEMRQI
WLESALERVMCASDACLTSLYVMTSPNMPKRIFLEDVIDRIIMFIKFQLNNTIYCVYDPV
YSIQSTSKKKVDGRKRRGGATSGTRRSAGAAHGGSGRAARELYTHAHESVTLLAELFAAH
HLTDTTVLHASTVGVSPFFVENVSELQLSALKLVTTIFTKYEQHRRLLLEDILASIARIP
SSKHNLRSFQLSSDQQIQMLTALVLQLVQCVVTLPETLCKSQDKDKDIESSDSKKNAVDK
DLMIISKYEAAISVGGTFLTSFLNKCRSRNEEVDFRPLFENFVHDLLTTVNKPEWPATEL
LLSLLGTMLVKYMSDKSMEMSVRVASLEYLGLVAARLRRDSVVSRAKLATMDAVVRDIRA
EEEKDGNQGQSATSGLDEDEERTEFLQRVLLDYLAINGQKDQAWNCARHFYITQWYRDMV
VQPKSTSPTKKPKNKSKKRYIKDDTSEEESDADDDSDDEGRRLKDIKAEKKLASSALVSA
EKFKTMERRKNFFLEKIRPFRYQGGTQVQVMQSYIDYSGAELISQYLASKRSFSQSFDRY
LRKILVILCENTIAIRTKAMKCLAMIVEADPAVLARPDMQIGVNRSFLDQSTAVREAAVD
LVGKFVLSRPDLIDKYYGMLSNRILDTGVSVRKRVIKILKDICIECPEFPKIPEICVKMI
RRVNDEEGIRKLVMEVFQNMWFSPCANTARPGALDMTAAAADPLTRKVLNITDVVISSRD
IGLEWFQQLLTSLFKPKEDKEDSTKIIYQPPKSLLLACQQIVDCLIESLLQLEETSADGT
GSSQRILACLSTLHLFAKIRPQLLVNHALTLQPYLSLKCQNQYEQQIMSTVASTLELVVP
LMEHPSEVFLAQLEEDAVKLILQRGQLVIASCIACLAAIVNNLTHNYKLIRDVFNKYHGV
LLQWKHCWQRNPEMTRGLHSRPYFRRALFIVGLLLRYFDFTEARVIDGLPADIKEQIFST
LMFFVGLEDEDFVSHTLKALGSVCVRHYEFMLRPELKDFYHQLLTSDLAPIEMKADVLRN
IEMYLQEEEQRMIRQDKEWSKRSKHENLKEMGDVSSGMASTVIQLYLKEILGSFLHPSTM
VRSSAMKVVQLVLAQGLVHPVQIVPYLICMSTDLEVTVSHTADKHLQEIDKKYPGFIHMK
AQLGIKLSYQLQKILQANANKGVIRGFRKKDQDELPTALNGFLYSLLRNTRPQRRALVLS
LLKQFDDVSTAPLDQMLYLADNLSYFPFQVQDEPLFIIHHIDIIISTSGSNLLQLFREGL
NKPSTEEKEPLDEEEDDEEAETLLTQMPEHTRPLQDAMRQARGCLLLLVLKQHLKQLYGF
TDAKINQYSPSENVKVYEKAVSRRHAPIFEPKATIAQLQDNDRAADELDERGRRRLVDDY
LEFKQLMLKFDPEEEEDEEQAGQATSGGATAPSEAVPAAPPAPPPAT
NT seq
5904 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaagggatatcccaagtgtccctattacaacattagcaggagtagccagcttg
acagacttattaccagtgttaccgctcccgacgccattgcctgcaacactcaacaacaag
tcgcagttatttcatccgcgtgttgccgaagaggcagccattctgcttgcaacccgcgat
gaaaatttagtgtcgctgctaatacagtcacttatgcagacttcagtatcacacatagac
ctgaaagatgatgttattgcaaattcttcgaatcctccaaccccacaaccattgcctgaa
ttattgagggcaattttaagtgttaatcctaatgtgtttgagcagcaaccaagaactcat
tggggacctaattgccactcacaccataagtttaacggtatatctcctaatactgtgccc
tcaagcccatcatcacttggcaccgcatcaatccctaaccagcagttacttgctaccccc
tctcaatcctctccccatgttaacatgggctctcccccttcccaagccagaccagggaat
caactaaataatactgctcagaacagtgtatctcccatttggaacagtggaaactcttcc
aacatgtacgcaagcccaatgtcgaatacatcaagctctaatccacaaaatggtggtttc
tataatagtttagtacaagacaatagcaattatggcactaacttaaatgaagaaaaggat
cctctttctatgtcaccaagtaaccagccagatcaacagagattgcttatgcaattacac
gagaagacatttgagcaagatggtaatgtgaggacaggacaatctccagcacaagccagt
gtggcgccgtcgccgctacgtttagaaccgcaagtgcctctgccgtcaatgggtgcgccc
tatgcgcctcaacaacaagctcaaaatagcagccaagacaagcaagaccctagtaaaagt
acgggagttactaacaacagataccctgttgtaaagcttggccggctatcagagggatta
ttgaagaaacatgatttcacaactgaagaaagatcaaggaagaacagtgcactagaatcg
gattccgatgataatgtaccactcaagacaaaatcaaatagcggtacgcctactgtagat
aaagaaagagaagcaatagatatagctagagagaaaaattgggaggcagttaagagaaaa
catgaagaagccagcaaaagagaagaagccgaggctgcaatagttcggcctaagttacga
aaagtagaacggagattagtacctgtgctagaaatgctttctgtagatgaattaatggag
acaaatacttatcaacgttttaacaaattgattgaatcagtatttgaagctattgacgac
gacatattgattactgacgaaatggagggcacagatatacccgaagagttattattaccg
cgttatcagcttcaagagttatgctcagaagcagctaagttaaagaatcttggtgctatg
gaagccataccttcagacagattagttcgattgttaaacattatggagaaaaatattaga
gcagcagaaaaaatgtcactagtgagtgacccggaggacagtgaagagatgagacaaata
tggctggagtcggcattagagagggtcatgtgcgcctcggacgcgtgtctgacgtccctg
tatgtcatgacctccccaaatatgccgaaacgtatatttctagaagatgttatagataga
attattatgttcataaagttccagttgaacaatactatttactgtgtctacgaccctgta
tatagtattcaaagtacatctaagaagaaagtggacgggcgcaagcgtcgcggcggcgcg
acgagcggcacgcggcgcagcgcgggcgcggcgcacggcggctcggggcgcgcggcgcgc
gagctgtacacgcacgcgcacgagtccgtcacgctgctggccgagctgttcgccgcgcac
cacctcaccgacaccacggtgctgcacgcctccaccgtcggcgtctcgcccttcttcgtc
gagaacgtcagcgagctgcagctcagcgcgctcaagctcgtcaccacgatattcacaaag
tacgaacagcacagacgtctactgctagaggatatattggcatcgatagctcgcattccc
agttccaagcacaacctgcgctctttccaactgagctcggaccaacagattcagatgctg
acggcgcttgttctgcaactcgtacagtgcgtggtcactctgcccgagacactgtgcaag
tcgcaggacaaagacaaagatattgaatcatctgacagtaaaaagaacgcagtagacaaa
gacctcatgataatttccaagtacgaggcagcaataagtgtaggtggtacattcctgacg
tcattcctgaacaagtgccggagtcgtaacgaagaggtcgacttcaggccgctgttcgaa
aatttcgtgcacgatctgctaaccactgtgaataaacccgagtggcctgcgactgaacta
ctgctgagtctacttggaaccatgctggtgaagtacatgtcggacaagtcgatggagatg
tcagtgcgcgtggcgtcgctggagtacctggggctggtggcggcgcggctgcggcgcgac
agcgtggtgtcgcgcgccaagctcgccaccatggacgccgtcgtgcgcgacatccgcgcg
gaggaggagaaggacggcaaccagggacagagcgcgacatcgggattagatgaagacgaa
gaaaggacagaattcttacagagggtattgcttgactatcttgccatcaacgggcaaaag
gatcaagcttggaattgcgcccgacatttctatatcacgcagtggtacagagacatggtc
gtgcaacccaagagcacttctcctaccaagaaaccgaagaataagtcgaagaaacgttac
ataaaggacgatacgagcgaagaggagtccgatgctgacgatgatagtgacgacgaaggg
cgacgtctcaaggacattaaagctgaaaagaagctcgcgtccagtgcgctcgtgtcagct
gagaaattcaaaactatggagcggcggaagaatttcttcctcgagaaaatccgaccgttt
aggtatcaaggtggcactcaagtgcaagtgatgcaatcgtacattgattacagtggagct
gaactaatctctcagtacttagcttcgaaaagatcattctctcagagtttcgatagatat
ttaaggaaaatccttgttattttgtgtgaaaacacgatagcaatccgtactaaggcgatg
aagtgcctcgcgatgatcgtggaagcggacccggcggtgctggcgcggccagacatgcag
atcggagtcaaccgatccttcctggaccagtccacggccgtgcgcgaggccgccgtcgac
ctcgtcggcaagttcgtgctcagccggcccgaccttatcgataagtattatggaatgctc
tcaaatagaatattggacactggtgtatcggtgcgtaaacgtgtgataaaaattctaaaa
gacatatgtatagagtgcccggaattccctaaaatacctgagatttgtgtaaagatgatt
aggagagtgaacgatgaggaaggcataaggaagttagtgatggaagtgtttcaaaacatg
tggttcagtccgtgcgcgaacacggcgcggccgggcgccctcgacatgacggcggccgcc
gccgacccgctcacgcgcaaggtgctcaacatcaccgacgtcgtcatctcctcgcgcgac
atcggcctcgagtggttccagcagctcttgactagtttgttcaagcccaaggaagacaaa
gaggattccacgaaaatcatttatcaacccccaaagtcgctcttacttgcatgtcagcaa
atagtagactgtcttattgaaagtttactacagctggaagaaaccagtgccgatgggact
ggttcatcacaacgtattctagcatgcctctccactttgcatttgtttgcgaaaattagg
ccacaattgttagtgaatcatgcattaactttgcagccatacttgagcttgaagtgtcag
aatcagtacgagcagcagataatgtcgacggtggcgtcgacgctggagctggtggtgccg
ctgatggagcacccgagcgaggtgttcctggcgcaactggaggaggatgccgtcaagctg
atcctgcagcgagggcagctcgtgatcgcgtcctgcatcgcctgcctggccgccatcgtc
aacaacctcacgcacaactataaactcattagggacgtcttcaataagtaccatggtgta
cttcttcaatggaaacactgctggcagaggaacccagaaatgacgagagggttgcattca
aggccttatttcagacgagcgttatttatagtaggacttctgttgcggtatttcgatttc
acggaagctcgagtgatagatgggcttccagccgacataaaagaacagatattctcaacg
ttgatgtttttcgttggacttgaggatgaagactttgtgtcccacactctgaaggcgctg
ggctcagtttgtgtcaggcattacgagttcatgttgcggcctgagctgaaggacttctat
catcaacttctcacatcagatttagcacctatagagatgaaagcggacgtcttgagaaat
atcgaaatgtacttacaagaagaagagcagaggatgataaggcaggataaagaatggtcc
aaaagatcgaaacacgagaatctcaaggagatgggtgacgtgtcttcgggtatggcgtcg
acagtgatccagttgtacctgaaggagattctgggctcgttcctgcaccccagcaccatg
gtccgctccagcgccatgaaagtggtgcaactcgtgttggcgcagggtctcgtgcatcct
gtacaaattgttccatatttaatttgcatgagcacggacttggaagtcacagtgtctcac
acagctgacaaacatctccaagagattgacaagaagtatccgggctttattcacatgaag
gcgcaacttggaatcaaactatcctaccagttacaaaaaatattacaagctaacgcaaat
aagggagttattagagggtttaggaaaaaggatcaagatgagttgccaactgcactcaac
ggttttctatactcattgcttcgtaacacgcggccacagcgacgtgcgttggtgttgtcg
ctactcaaacagtttgatgacgtttctactgcgccactggatcagatgctgtacttggcc
gacaatttgagctactttccatttcaagttcaagacgaaccattatttattattcatcac
attgacatcattatttcaacatcaggatctaatttactacagctttttcgtgagggcctc
aacaagccgagcacggaggagaaggagccgctggacgaggaggaggacgacgaggaggcg
gagacgctgctgacgcagatgccggagcacacgcggccgctgcaggacgccatgcgccag
gcgcgcggctgtctgctgctgctcgtgctcaagcagcacctcaagcagctctacggcttc
actgacgcaaaaatcaaccagtactcaccgtccgagaacgtaaaggtttatgagaaagca
gtgtcgcggcggcacgcgcccatcttcgaacccaaggcgaccatcgcgcagttacaggac
aacgaccgtgccgccgacgagctcgacgagcgcggccgtcggcgactcgtcgacgattac
ctcgagttcaagcaattgatgctgaagttcgaccctgaggaggaggaagacgaagaacag
gctggccaagccacgagtggcggcgcgaccgcccccagcgaagccgtgccggccgcgccg
cccgcgccgccgcccgccacctag
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