KEGG   Helicoverpa zea (corn earworm): 124631451
Entry
124631451         CDS       T08400                                 
Name
(RefSeq) THO complex subunit 6
  KO
K13175  THO complex subunit 6
Organism
hze  Helicoverpa zea (corn earworm)
Pathway
hze03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:hze00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    124631451
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hze03019]
    124631451
   03041 Spliceosome [BR:hze03041]
    124631451
Messenger RNA biogenesis [BR:hze03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     124631451
Spliceosome [BR:hze03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    124631451
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40 NBCH_WD40 WD40_MABP1-WDR62_2nd WDR55 EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_IFT122_1st ANAPC4_WD40 Beta-prop_WDR75_1st PQQ_2 PQQ Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd CBM_19 Beta-prop_DCAF12 Beta-prop_NWD2_C BBS2_Mid Beta-prop_IFT140_1st Beta-prop_EML
Other DBs
NCBI-GeneID: 124631451
NCBI-ProteinID: XP_047021806
LinkDB
Position
6:11492974..11495099
AA seq 326 aa
MLDKILYNTVLSQTLSPCGKYLVAGNIYSQIAVFDLDRILNPVVELLTSDYNKPKYIHTL
ESGRQVCSLTTTEKFLVVGTVNEIFGWDWKNVASSKLSKPSWVIRVPSQSSSLEQTDVNS
LWLSGDEAKLYAGCGDNNVYVFNMEDGRLLSTLKGHSDFIHSIDGKNQQLITASEDGTVM
LWDRRTCSSHNKLEPHANSKVSRPDIGKWVGSVALGDDWIVCGGGPRLSLWHLRSLDAVT
VFDIPDHGIHVSFFHDDCVFAAGAAKHLYQLSYSGEVKVELPVSATTVYSAVLSTSPNKV
LAIAGSSPEIDLCTTFNYRDQVLHFR
NT seq 981 nt   +upstreamnt  +downstreamnt
atgctcgacaaaattctatacaacactgttctctcacaaacattgtcgccctgcggcaaa
tatttagttgccggtaatatttacagtcagatcgctgtttttgatttggatcgaatacta
aatcctgttgtcgagctacttacttctgactacaataagccgaaatacatccacacccta
gaatctgggcgacaagtatgcagcctgacgactaccgaaaagtttttagttgttggaaca
gtaaatgagatttttgggtgggactggaagaatgtggccagttctaagcttagcaaacct
tcttgggtgattagggtgccttcccagtcgtcatcgctggagcagactgatgtgaatagt
ctatggttgtcgggagatgaggctaagctgtatgcaggctgtggagataataatgtttat
gtgtttaatatggaagatggaagattgctgtctacgttgaagggacatagtgatttcata
cattctattgatggaaagaaccagcaactaataaccgccagtgaagatggtacagtaatg
ttatgggacaggcgcacatgcagcagccacaacaaactggagccccatgccaatagcaaa
gtgagccgtcctgacatcggcaagtgggtgggctctgttgctctgggcgatgattggatt
gtttgcggcggcggccctcgcctatccctatggcacctccgttccctggatgctgtcaca
gtcttcgacattcccgaccacggtatccacgtatcatttttccacgacgactgtgtcttc
gcggcaggagcggccaaacacctctaccagctcagttactctggagaagtcaaggtcgaa
ctaccagtctcagcaaccacagtgtactcagcggtactgagtacaagccctaacaaagtc
ctagccattgccggatctagccctgagatagatctatgtaccacattcaactatagagat
caggtactacacttccgatag

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