Helicoverpa zea (corn earworm): 124632181
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Entry
124632181 CDS
T08400
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 homolog
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
hze
Helicoverpa zea (corn earworm)
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hze04121
]
124632181
Ubiquitin system [BR:
hze04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
124632181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
124632181
NCBI-ProteinID:
XP_047022852
LinkDB
All DBs
Position
7:complement(6110231..6131108)
Genome browser
AA seq
1804 aa
AA seq
DB search
GIISINLINVAGASNNNGKGGRQAAPVDVGSPLLDWEEADHFSFEDSERFEEDSLCSWSS
EPESLCNNWRGWRRPNLQNSFGSRSTKKNIQEKTVSTLSELAAKCVASHIPFELVEHVYP
PVPEQLQLQIAFWSFPDSEDDIRLYSCLANGSADEFQKGEHLFRDRAVKDVLQIGFHLSA
TVVVLSMPRAQFNVAVTFDRQRISSCNCTCSSTAHWCSHIVAVCLYRIHLPTQVCLRAPV
SESLQRLRRDQLQKFAQYLISELPRQVLPTAQRILDELLSAQPNSINTTCGAPDPTAGAS
AYEYTSWFLDEKTLHNNINKILVKFCVPTPIVFSDVNYLSTSAPPAAAEWSSLLRPLRGR
EPEGMWNLLSIVREMFKRNDRNAIPLLEIITEEVMACEQIIVWWYTTKAALVAWGSNGGG
GKHGGSGGNSAAQHACSSLCDEVVVLWRLAALNPALAPHERDTLHEQFAQWHMKVLDKVA
KNRNTHITTSSSSHARHASRSHSHSPYINGISENEVFPGFHPAMEACFLEWDDYQIPGVT
YTKDLNPLYHSPFTIFRHADKQNDSVHQVNSSKAVLNNEMSLSYRLTNPDPSLLGHRTTI
HRNSHINVDLAVPGPSNQPCGSEEGPSDPPRDSGPSDGNHSSVSSEGFCENEEEILQQSG
GDTDSQESSSPPISSDDAQRRVSNDESVSDDDCNLYFYDTAAARRAVSGEGTSSGSGVAI
ASGSGCAGGWACGWEGSFARAEGLHAHGHARDACALGARLARELLARPPALGAAPLLPAL
DPRRPRRRHTPSPRLCAASHRLSCLASATLAKCAFLCTVLAEFSEHHELAFRIGLFALEM
ARPPASTKALEVKLNNQETELVALLKKLPTGAEQLALAREKAEQLRDGTLRNRGPALLPI
ALASFLFDVLVLSATDKENKHPARSPNDETLGFEAAVAALGLKANVSEAEHPLLCEGTRR
QRGELSLTLLSFYKDDPVKLARIMNKLLDREIHQLTKSPMVSLYYMNNPRLAAYRADVSA
HPAYNAHAHPSPPHCSSATPSQMSTQCGSNEWRAQTASLSGDMERLVVSEGGASPPAHSS
HASHASHASHASHVSHASHASHASHASHASHASHASHASHASHASHASHTSHTTHATHTT
HTPHPTPHASSSHPPISRAKDSRYKGKRLYPSVPNQPSEASAHFMFELAKSVLFKAGGSS
STSLFTQPSCAREHHGPHRGLHMAAFQLGLYALGLHNCVSANWLSRTYSSHVSWITGQAM
DIGAPAILFLIDAWEGHLTPPEAASIADKASSGRDVPTVRAAAELALSVLPHAHALNYNE
IQRAVLQCKEQSDAMLERACLTVEAAAKGGGVYPEVLYTVARYWHELYLRQANEESEPLL
DEPQYRAQPPPLAVPVPYPIPYPFTYHPYPPAIYQLPYAGTGPPHPPPQYALPPYFVRGI
VAPPGAPQLQQHPQHQQHPPLQQHPPLQQHPPLQQHPPLQQHPPIPQHPPIPQHQQLPQH
PPLQQHPPLQQHPQPLQHTQPMPHPQHQPMQHPGLAPHPPMPQHVAHPQTIQVNATVHQV
HPAPIPPPMPAPQQIVPVPGVSGAPGVNVGNVNGVGPAPNVGVGNGAPPNGAAPAPAVNQ
TQLRRLLAAYRVGMLALETQARRVHDDRPQNKFGRNPPYGEHVKWLLRISKRLGAQYLHQ
FCVCAVNSVVSPFVLYELCVESAHWLARGGPHHLVMQHLRGTLAPLVQKCQQMYIQCIHQ
KLYHLTTVEYEEFVSIVLSARTAFQLTPEGNTQFKEWLASLRRSKSCKKDLWTQLNAALQ
TNGK
NT seq
5415 nt
NT seq
+upstream
nt +downstream
nt
gggattatttcaataaatctcattaacgtggcgggggcatcaaataataatggcaaaggg
ggccgacaagccgccccagtcgatgtggggtctcccttactcgactgggaggaggctgac
cattttagttttgaggattctgaacggttcgaggaagattccctgtgtagctggagttca
gagcccgagagcctatgcaacaattggcgaggatggcggcgtccaaatcttcagaactca
tttggatcccgatcaactaaaaagaatattcaagaaaagacagtttcaacactaagtgaa
ctagcagcaaaatgtgtagcatctcacataccatttgaattagttgaacatgtctatcca
ccggtaccggagcaactgcaactccagattgctttctggagtttcccagacagtgaagat
gacatcaggttgtactcctgccttgcaaatggctcagctgatgagtttcagaaaggagaa
cacctgttcagagatagagcagtgaaagacgttctacaaattggttttcacttgtctgca
acagtggttgttctaagcatgccgcgggctcagttcaatgttgctgtcacatttgacaga
caaagaatatcgtcatgtaactgcacctgctcctcaacggcgcattggtgctctcatatt
gtagctgtgtgcttgtacaggatacatcttccaactcaagtatgcctcagagcacctgtg
tcggaatctctgcagcgtttgcgaagagaccaactgcagaagttcgcacagtacttgata
tcggagttgcctcggcaagttttgccaacagcgcaacgtatactagacgaactgctgtcg
gcacagccgaactccataaacaccacatgtggtgcaccggatcctaccgcgggcgcttcg
gcctacgaatacacgtcctggttccttgatgagaagacactgcacaataacatcaacaag
atcttagtcaaattttgcgtcccaacgcctattgtgtttagcgatgtcaactatctaagt
acaagcgcgccccctgccgcggcggaatggtcgtcactgttgagaccgctgcgtggcagg
gagccagaaggcatgtggaacttgctctccatcgtcagagagatgttcaagaggaacgat
agaaatgctataccccttctggaaatcataactgaagaggtcatggcatgtgaacagatt
atagtgtggtggtacacgactaaggcggccctagtggcttggggcagtaacggcggcggc
ggtaagcatggcggcagtggaggaaattctgctgcacagcatgcttgctcctctctttgt
gacgaggttgtcgtcttgtggcgtctcgctgctttgaacccggccttggcgcctcacgag
cgtgatacgcttcacgaacaatttgcccaatggcacatgaaagtacttgataaggtggca
aagaatcgcaacacccatataactacaagttcgtcttcgcacgctagacacgcgtcgcga
tctcattctcattctccttacatcaacggtatcagcgagaacgaagtgttcccagggttc
cacccagctatggaagcttgcttcttagagtgggatgactatcagatacccggggtgacc
tacactaaagacttgaacccgctgtaccacagccctttcactatctttagacatgctgat
aaacagaatgatagtgtacatcaggtaaattcgtctaaagcagtgttgaataacgagatg
tcattgagctataggctgacaaatcccgatccttcactgctaggacaccgtactaccatt
cataggaatagtcatataaatgtggacttagctgttcctggaccctcaaatcagccttgt
ggctctgaggaaggaccaagtgatcctccgcgtgattcaggaccaagcgatggaaaccac
tcgagtgtttcttctgaaggtttctgtgagaacgaagaggagattcttcagcagagcggt
ggagacacggattctcaggagtctagctctcctcccatttcgtctgatgatgctcagcgg
cgcgtgtccaatgacgaatcggtgtcggatgacgactgcaacctgtacttctacgacacg
gcggctgccaggcgcgctgtctcgggggagggaaccagctccggctccggtgttgcgatc
gcatcaggcagtggatgcgcgggcggctgggcgtgcggctgggagggctcgttcgcgcgc
gcggaggggctgcacgcgcacgggcacgcgcgcgacgcgtgcgcgctgggcgcgcggctg
gcgcgcgagctgctggcgcgcccgcccgcgctgggcgccgcgccgctgctgccggccctg
gacccgcgccgcccgcgccgccgccacacgcccagcccgcgcctgtgcgccgcctcgcac
cgcctctcctgcctcgcctccgccacgctcgccaagtgcgccttcctctgcaccgttcta
gcagaattcagcgaacatcacgagcttgcattccgcataggtctatttgcgctcgagatg
gctcgtccgccggcgagtaccaaagcattggaagtaaaactgaacaaccaagagacggaa
ttggttgctcttctgaagaagctaccgacaggggccgaacagttggctttagctcgcgag
aaggctgagcaactgcgtgacggtacattgaggaaccgtggacctgctctattgccgatt
gcactggcgagcttccttttcgatgttctcgttttatcagctactgataaagagaataaa
catcctgcaagatcgccaaacgatgaaaccttagggttcgaagcagccgttgcagcttta
ggactgaaggcaaatgtgtctgaggcagaacatcctctactttgtgagggaacaagaagg
caacgaggagagttgtctctaactctactttccttctataaggacgatccggtcaaactg
gccaggattatgaataaacttctagaccgcgaaatccaccagttgacgaagagtccgatg
gtgagcctgtactacatgaacaacccgcgtctggccgcgtaccgcgccgacgtgtccgcg
catcccgcgtacaatgctcacgcgcaccccagcccgccgcactgtagcagcgccactcca
tctcagatgagcacgcaatgcgggtcgaatgagtggcgagcacagacggcgagcctgagc
ggggacatggagcgtctggtggtgtccgagggcggcgcctcgcctcccgcgcattcgtcg
cacgcgtcacatgcgtcgcatgcgtcgcatgcgtcgcacgtatcgcacgcatcgcacgca
tcgcacgcatcgcatgcgtcgcacgcatcgcacgcgtcgcacgcatcacacgcgtcgcac
gcgtcgcacgcatcgcacgcgtcgcatacgtctcacacgacgcacgcaacccatacgacg
cacacgccgcatccgacgccacatgcttcctcctcgcacccgcccatctccagggcgaag
gattccagatacaaaggcaagcgcctatacccttcagtgccgaaccaaccctctgaagcg
tctgctcactttatgttcgagttggcaaagtccgtgctgttcaaagccggcggctcttca
agtacaagcctgttcactcagccgtcgtgtgctagggaacatcatggaccgcatagagga
ttacacatggcggctttccaattgggactttacgctctcggcttacataactgtgtgagc
gctaattggctcagccgtacctattcatcacacgttagttggatcacaggtcaagctatg
gatattggcgcacctgccatcttattcttgattgacgcatgggaaggtcatttgacacct
cccgaagctgctagcattgcggataaggcgtcgtccggtcgtgacgtacccacagtccgt
gcggccgccgagctagcattatccgtgctgcctcacgctcacgctctcaactacaatgag
atacaacgtgccgtgctgcagtgcaaggaacaaagcgacgctatgctggaacgagcctgc
ctcaccgttgaagctgctgctaaaggtggcggcgtgtatcccgaagtactatacacagtg
gcacgctactggcacgagttgtatctacgtcaagctaacgaagaatcagagccgctgttg
gatgagccacagtacagagcccagccgccgcctctggccgtgccagtgccctatcccata
ccgtaccccttcacctaccatccgtacccgcccgctatataccagctgccgtacgctgga
acgggtccaccgcatccgccaccacagtatgcgctgccgccgtatttcgtccgcggcatc
gtggcaccgccgggagccccgcaactgcaacaacatccccagcatcaacaacaccccccg
ctgcaacaacaccccccactacaacaacatccgccgctccaacagcatcctccgctgcaa
cagcacccgccgatcccccaacatccaccgatcccccaacatcagcaattgcctcaacat
ccgccattacaacagcatccgccgctgcagcaacatcctcaaccgttacagcatactcag
ccgatgccgcatcctcagcatcaaccgatgcagcatccaggactcgcgccacacccgccc
atgccgcaacatgttgcgcatccacagactatacaagtcaacgcgactgtgcatcaagtt
catccagcaccgattcctcctccgatgccagctccacaacagatagtgccagtacccgga
gtatcaggcgctcccggcgtgaacgtgggcaacgtgaacggagtaggccccgcccccaat
gtgggcgtaggcaacggagccccgcccaacggcgcggcccccgcccccgccgtcaatcag
acgcagttgcggagattgttagcggcgtatcgagtaggcatgttggccctagagacgcaa
gcccgtcgggtacatgatgatcgtccgcagaataaatttggcaggaacccaccatacggc
gagcacgtgaaatggctgctccgcatatcaaagcggctgggagctcaatacctgcaccag
ttctgcgtgtgcgcggtgaactcggtggtgtcgccgttcgtgctgtacgagctgtgcgtg
gagtcggcgcactggctggcgcgcggcggcccgcaccacctcgtcatgcagcacctgcgc
ggcacgctggcgccgctcgtgcagaagtgtcagcagatgtacattcaatgcattcatcag
aagctgtaccacttgactacagtggagtatgaggaatttgtgagcatcgttctgtcggcc
cgtactgctttccagctcacaccagagggaaacacacagttcaaggagtggcttgcttcc
ttgcgcagatcaaaatcctgcaagaaagatctgtggacgcagctgaatgcggctctgcag
acaaacggcaaatga
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integrated database retrieval system
