Helicoverpa zea (corn earworm): 124632301
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Entry
124632301 CDS
T08400
Name
(RefSeq) chromatin-remodeling complex ATPase chain Iswi isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
hze
Helicoverpa zea (corn earworm)
Pathway
hze03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124632301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hze03021
]
124632301
03036 Chromosome and associated proteins [BR:
hze03036
]
124632301
Transcription machinery [BR:
hze03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
124632301
Chromosome and associated proteins [BR:
hze03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
124632301
RSF complex
124632301
WICH complex
124632301
B-WICH complex
124632301
NORC complex
124632301
BRF complex
124632301
NuRF complex (fruit fly)
124632301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
HAND
ResIII
DEAD
HDA2-3
DBINO
Myb_DNA-binding
DUF4800
Motif
Other DBs
NCBI-GeneID:
124632301
NCBI-ProteinID:
XP_047023039
LinkDB
All DBs
Position
8:6123905..6130093
Genome browser
AA seq
1028 aa
AA seq
DB search
MSQTEEPMDVAADVGENSNGSSSDTTSSRGKEGDFESKIETDRSKRFEFLLKQTEIFSHF
MTNTPKSGSSPPKPKAGRPKKIKQDVEPGGGSAGDHRHRKTEQEEDEELLAETNTKVKSI
FRFEASPHYIKNGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKHF
KNVPGPHIVIVPKSTLTNWMNEFKKWCPSLRAVCLIGDQETRSTFIREVLMPGNWDVCIT
SYEMIIRERSVFKKFNWRYMVIDEAHRIKNEKSKLSELLREFKSMNRLLLTGTPLQNNLH
ELWALLNFLLPDVFNSSDDFDSWFNTNAALGDNQLVSRLHAVLRPFLLRRLKSEVERKLK
PKKEVKVYVGLSKMQREWYTKVLMKDIDVVNGAGKVEKMRLQNILMQLRKCCNHPYLFDG
AEPGPPYTTDLHLVYNCGKLAILDKLLPKLQEQDSRVLIFSQMTRMLDILEDYCLWRQYK
YCRLDGQTPHEDRNRQIEEYNAEGSEKFVFMLSTRAGGLGINLTSADVVIIYDSDWNPQM
DLQAMDRAHRIGQKKQVRVFRLITENTVEEKIVERAEVKLRLDKLVIQSGRLVDQKSQLN
KDEMLNMIRHGANHVFSSKDSEITEEDIDVILAKGEHKTEELKQKLESLGESSLRAFSMD
TPGATTDSVYQFEGEDYREKQKVLPIGNWIEPPKRERKANYAVDAYFREALRVSEPKAPK
VQAPRPPKQPIVQDFQFFPPRLFELLDQEIYHYRKTLGYKVPRNPELGPDAAKIQREEQR
KIDDAEALTEEEIQEKEQLLTQGFTNWTKRDFNQFIKANEKYGRDDIENIAKDVEGKTPE
EVMEYSAVFWERCHELQDIDRIMGQIERGEAKIQRRASIKKALDAKMARYRAPFHQLRIS
YGTNKGKNYVEEEDRFLVCMLHKLGFDKENVYEELRASVHAAPQFRFDWFLKSRTAVELQ
RRCNTLITLIERENQELEEKERAEKKKKSGAANQNTPGGNATGKGANTSKRKADNTPDTA
QKHKKKKK
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaacagaggaacctatggacgttgctgcagatgttggggaaaattcaaatgga
tcatcaagcgacactacttcctcgagaggcaaagaaggggatttcgaaagtaaaattgaa
actgatcgttcaaaaagatttgagtttctgttgaaacaaactgagattttctctcatttc
atgacaaatactcccaaatctggcagcagtccaccaaaaccaaaagccggcagacctaag
aagatcaaacaagacgtggagccgggcggagggtcagcgggagaccaccgccaccgaaag
actgaacaggaagaagacgaagagctacttgcagaaacaaacactaaagtaaaatcaata
ttccgttttgaagcttccccgcattatattaaaaatggagaaatgcgtgattatcaagta
agaggtcttaactggatgatctccctgtatgaaaatggcatcaatggtatcttggcagat
gagatgggtcttggtaaaacattacagactatttctttgcttggatacatgaagcatttc
aaaaatgtcccaggaccgcacattgttattgttccaaaatcaacattaacaaattggatg
aatgaatttaagaaatggtgtccatccctgagagctgtatgcctaattggtgaccaagaa
actaggagcacattcattcgagaagtcctgatgcctggtaactgggatgtttgtattaca
tcttacgagatgataattcgggagagatcagtattcaagaaatttaactggagatacatg
gtgattgacgaagctcatcgaatcaagaatgaaaagtcaaaactttcggaactgcttaga
gagttcaagagtatgaatcggctgctgctcactggtaccccactgcaaaacaatctccat
gagctgtgggccctgctcaacttcctgttgcctgatgtatttaacagttctgatgacttt
gattcttggttcaacactaatgcagctctcggtgacaatcaactagtgtctcggttgcat
gcagtgttaagaccattcttacttcgtcgcctgaagtctgaggtggaaaggaaacttaaa
ccgaaaaaggaggtgaaagtgtatgtaggtttgagcaaaatgcaaagagaatggtatact
aaggtcctgatgaaagacattgacgttgtaaatggtgctggcaaggttgaaaagatgcga
ctgcagaacattcttatgcaactgcgcaaatgctgcaaccatccttacctatttgacggt
gcagagcctggcccaccctacacaactgacttgcaccttgtgtacaactgtggaaaactt
gccatccttgacaaattgttgccaaaactccaagagcaggattctagagtactgatattt
tcccaaatgaccaggatgttggacattctagaagattattgtctttggcggcagtataag
tactgccgtttagatggccaaacaccacatgaagatagaaataggcaaatcgaagagtat
aatgcagaaggaagtgagaaatttgtcttcatgctgtcgacgcgcgctggaggtttgggt
attaacttgacgtcggccgatgtcgtcataatttacgattccgattggaatccgcaaatg
gatttgcaggctatggacagagcacatcgtattgggcagaaaaaacaagtaagagtattc
agactcattacggaaaatacggtggaagagaagattgtagaacgagctgaagtgaagctc
aggttagacaaactcgtgatacaatctggtcgcttagttgatcagaagagtcagctcaat
aaggacgaaatgctcaacatgatcagacacggtgccaaccacgtgttctcgtctaaagat
tctgaaatcactgaagaagatattgacgtcatattagctaaaggagagcacaagactgaa
gagttgaagcaaaaactggagagtctaggagaatcttcactacgagccttttccatggac
acacctggcgccacaacagattcggtctaccagtttgaaggggaggattacagagagaag
cagaaagtgttacccattggtaattggatagaaccgcctaaacgcgagcgtaaagctaac
tatgcagtggacgcgtacttccgagaggcactgcgcgtgtccgaaccgaaggcgcctaag
gtacaggcacctcgtcctccaaagcaaccgattgtgcaagatttccagttcttcccgcca
cgacttttcgaacttctggatcaagaaatatatcactaccgcaaaacactggggtacaaa
gttcctcggaatcccgagttgggtcccgatgctgccaagattcaaagagaagaacaacgg
aagatagatgacgctgaagctcttactgaagaagaaatacaggagaaagaacagttgtta
actcaagggtttaccaactggacgaagcgagacttcaaccaattcattaaagcaaatgaa
aaatatggtcgagatgacattgaaaacattgccaaagatgttgaaggcaaaactcctgaa
gaagttatggaatattctgcagttttttgggagaggtgtcacgaacttcaagatatagac
agaataatgggacaaattgaaagaggagaggccaaaatacaaagaagagcgtctatcaaa
aaagcgctggatgctaagatggcgcggtatcgagctccattccatcaattaagaatctcg
tatggaacgaataaaggaaaaaattacgttgaggaagaggacaggttcctcgtgtgcatg
ttgcataaattaggcttcgataaagaaaacgtgtatgaagaacttcgagcatcagtacat
gctgcaccacaattcagatttgattggttcctcaagtccagaacagccgtagaattgcaa
cgcagatgtaatactcttataactttgatcgaaagagaaaatcaagaacttgaagaaaaa
gaaagagctgaaaagaagaaaaagagtggtgccgccaatcaaaatacacctggcggaaat
gcgactggcaaaggcgctaatacaagtaaacgcaaagccgacaacacacctgataccgcc
caaaagcacaaaaagaagaaaaagtga
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