KEGG   Helicoverpa zea (corn earworm): 124633708
Entry
124633708         CDS       T08400                                 
Name
(RefSeq) DNA mismatch repair protein Msh2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
hze  Helicoverpa zea (corn earworm)
Pathway
hze03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hze00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    124633708
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hze03400]
    124633708
DNA repair and recombination proteins [BR:hze03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     124633708
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_I MutS_II
Other DBs
NCBI-GeneID: 124633708
NCBI-ProteinID: XP_047024972
LinkDB
Position
10:complement(6646045..6668834)
AA seq 917 aa
MSSLQPIQALSLDSVQQQAFIKYFHSLPEKPATTVRIFDRNDYYSVHGADASTAAREVFS
TVANIKKMGLEPNKLDYLVLSKGNFEILIKKLLLVRRYRVEIYVAEGSVKGSDWSLKYKG
SPGYLSQLEEILGEGLGASDDTTPCLIAVHIKTDAVTKGRLLGVACVTAGDYQMSVTEFT
DDDLLTELETITVQMAPSECLVPISEHDDYKALKKVMERTNVTVTKLKKSEFSTEGLIQD
LNRLLKFKENQQQDANAFPETSKEVAMTCLAAAIKYSALLNDSTNFGRFRISTIQADCFL
HLDSAALSALNVFPELGDTSHAPSRSLYGLLDRCRTQQGKRLLAQWLRQPLRDINLINER
LDIVELLKSNSQLRLQLHEDHLRRIPDLQALARRLTRKKANLQDCYRIYQAINRLPSLLR
CLAEAENPTVHSSITEPISELNEDLGKFLEMIETTVDMEAVDRGDFLVKPSFDEQLQSLS
EQLEQMQSSADKELNKAAKDLGLDAGKTIKLESNPQNGFCLRVTKKEEQTLRGNKKYTVI
DAVKGGVRFKTKALENITEEYTTIKSNYEREQDKVVAEIVGIAAGYSECLFCLSHILSRL
DVLVSFSVAAASAPHSAYIRPTITEDLNELVLKELRHPCLEVAEGVSYIPNDVVFKRGTG
VMHIVTGANMGGKSTWMRSCGVAVVLAHAGCPIPAAAAKIPRLKALAARIGASDAEAKGH
STFMREMIDTAAILRTATPDSLVLIDELGRGTSTYEGCGIAWAIAEELATKSQCFCLFAT
HYQELTRLASTHPGVIINSHAEASVVNGQLLLLHRIAPGPAMHSLGLHVAKLADLPDSII
EYAEAKQAQLEINLFDVEAAVQSEETTEGHKLIVEFLRKCKQIQESSPSDGLMMEEITKL
KQELLQTQNKYVESLMA
NT seq 2754 nt   +upstreamnt  +downstreamnt
atgtcctcgctacagcctattcaggcattgagcttagattctgttcagcagcaggctttc
atcaaatattttcactctttaccagagaaacccgcgacaacagtgaggatttttgaccgc
aatgactactacagcgtccatggagctgacgcatcgaccgcagccagggaagtttttagc
actgttgccaatatcaagaagatgggccttgaacctaataagctcgactacctcgtactt
tccaaaggaaacttcgagattctcatcaagaaacttttgctggtcaggcgttatagagta
gaaatatacgtagctgaaggctccgtgaaaggcagcgattggtcactaaaatacaaagga
tcgcctggctacttgtcacaattggaagaaattctgggcgagggattaggagcttctgac
gataccacaccctgtttgatagcagtgcatatcaagaccgatgctgttacaaaaggccga
ctcctaggcgtagcttgcgtgacagccggtgactatcagatgtcagtgactgagttcact
gacgatgatttgctaacggagttggaaactatcacggttcagatggcgccttctgaatgc
cttgtgcctattagtgaacatgacgattacaaagcattaaaaaaagtgatggaaagaaca
aacgtgactgtaactaaattgaagaagagtgagttctcaactgaagggcttatacaagat
ttgaatcgactgctgaaattcaaagagaatcagcagcaggatgcgaacgcatttccagag
acaagcaaagaggttgccatgacctgcttggcagcagctattaaatactcggcactactc
aatgatagcaccaactttggaaggtttcgtatatcgacaattcaagctgattgtttccta
cacttggactccgcagcattatcagctctcaacgtgtttcctgaactcggagacacatcg
catgcgccttctagaagtttgtacgggttgctcgatagatgccgcacacaacaggggaaa
cgtcttctagcccaatggctacgccaaccgctccgagacattaacttaattaacgaacgc
ttagacattgtcgagttactaaagtccaactcccaacttcgtttacaattgcacgaagac
catttgagacggatacctgacttgcaagccttggcaagaaggcttacaagaaagaaggcc
aacttacaagactgttatagaatatatcaggctatcaacagactgccatctttactgcgc
tgtttagccgaagcggagaacccaacagttcactcatcgattactgaaccaatctcagag
ctgaatgaagatctcggcaagttcctcgagatgatagaaactaccgttgacatggaagct
gttgacagaggtgatttcctcgtaaagccatcgttcgacgagcaactacaaagcctaagt
gaacagttggaacaaatgcaatcttcagctgacaaagaactaaacaaggccgctaaagac
ctaggcctcgatgcaggcaagactatcaagttagagagtaacccacagaatggattctgt
ttgagagtaacaaagaaagaagagcaaactttacgcggaaataagaaatataccgttata
gatgctgtgaagggaggcgtgagattcaaaactaaagcgttagagaatatcactgaagaa
tataccacgatcaaaagtaattatgagcgggaacaagataaagtagttgctgagatagtt
ggtattgcagcgggctactcagaatgtttattctgtctatcacacatattgtctcggctc
gacgtgttagtatcgttctcagtggcggcggcttcagcaccacattccgcgtacattcga
cccactattactgaagatcttaatgaattggtactgaaggaattaagacatccttgcttg
gaagtcgctgaaggcgtctcttatatacctaatgatgttgtgtttaaaagaggaacaggc
gtaatgcacatagtaacaggcgctaacatgggcggcaagtcaacgtggatgcgttcctgc
ggcgtcgccgtcgtgctcgcccatgccgggtgtcccatacccgccgcagcagcgaagata
cctagactgaaggctctggccgcacgtatcggtgcgtctgatgccgaggctaagggacac
agcacgtttatgagagaaatgattgatactgctgctatactcaggacagcaacaccagac
tcgctggtcttgatcgatgagttgggacgaggaacttccacttatgaaggctgcggtata
gcttgggccattgctgaggaactagcaacaaaaagccaatgcttctgtctgttcgcgacc
cactatcaagagttaacccggttagccagcacccacccgggcgtcatcatcaactctcac
gccgaagcctcggtcgtcaacggccagttgttgctgctgcatcgcatcgctcccggacca
gccatgcattccttaggactgcacgtcgcgaagctagctgatctccctgattctattatt
gagtatgctgaagctaaacaggcgcaacttgaaatcaacttgttcgacgtagaagcagct
gtccaatctgaagaaacaacggagggtcacaaattaattgtagagttcttacgtaagtgt
aaacaaatacaagaaagttcgccatccgatggcttgatgatggaggaaataacgaaacta
aaacaagaattgttgcaaactcaaaataaatacgtggaatctcttatggcataa

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