Helicoverpa zea (corn earworm): 124634284
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Entry
124634284 CDS
T08400
Name
(RefSeq) rootletin
KO
K16469
rootletin
Organism
hze
Helicoverpa zea (corn earworm)
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hze03037
]
124634284
Cilium and associated proteins [BR:
hze03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
124634284
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rootletin
CCDC39
ATG16
FKBP15
PUMA_CC
Taxilin
Spectrin_SYNE1
Fib_alpha
Rod_CreS
ERM_helical
CCDC113_CCDC96_CC
DUF6746
APG6_N
USHBP1_PDZ-bd
ACBP4_C
Sec10_N
CENP-F_leu_zip
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
124634284
NCBI-ProteinID:
XP_047025728
LinkDB
All DBs
Position
11:complement(1886324..1923760)
Genome browser
AA seq
1969 aa
AA seq
DB search
MDSPGGSVSSDLRRQNEELRARLAGEAADHKRRLDAYRRAQQGQAALVSRLQSKVLQYKQ
RCSELESQMLETTPRSEPSASSTFRAPPPVKSGIALPPPPSASTCASAAVSAADARITDL
ETALRRLDEEKRKCEKLVQQNNLLRDQLEESHQLNEALTSDLQKLTNDWEALRDEMAIKE
DEWKDEEQAFNDYYSNEHHRLLSLWREVVAVKRHFAELQTNTERDLYRVKNEFDSNAREL
VGMLSGYSINVFAAQNIKPEYQPLSHQAAYQTPQGGYQASQPGYQATQPGYQASQPGYQA
QGPHAPGLQGSQGHGTTGAGPYTVEGMRVDLRDMTAQRDSALAELRERDARIQRLLGELQ
ELEERCGCAEAACGSASVMRAALEEVARALIHDSDSDAPPAHPAHLHLHDRSPKRIPTNA
NATAFAESTISAVQAALHKYQIQIHELQVKLQNSREQLATCRKHGEAAEINVASLESKVQ
DLQGKLDQANADVHQMLQEKESMQKTVEALRSDKNNLERNRVEINAMVESLTSDYEKLQK
INSRLEKTIEALESEKRNLNDEVDHLHREASSREAVLRAEEERSSRLRSELVSTREELNK
TALARDLLDQQKIEGDSILSQMEKHRSDLEIELERTLMERSDLQDLVEKLEAAVRNLESD
KKKLHEDVKHLEDEKSNLSSQSSEQQGDLNSLRKELLAAEQTRMELEADKASLCEKIKFL
EGERDKVELELRQVMRERGELSSQLTAMVRKKDTLNEEIIRLQQRLEQANETIGRINRAL
EDHVKDGEEKQILIDSLEKDKHHLQEQLAGVRSEKDALEAVLFDTANMLEDTDNKRAKLE
HELQETLVQQENYKGQIARLTKDLENSERKLRDTRNSMSQASGKKEAEYQQIISNINRTT
TENITKLKEEKEQLRQALEHKLSQTIAALTSEKESCEAGAREREKKLLIARDQLILQHDE
AMLRAENDKQQALLMAHQEQQALLERLEEAKRAFDLEQNKLERVRRDAHARAEQDRTYVN
QLKDEIAALKTRLDEAKATAEDECARFENRIKELHLEKEAVMRECTEIRAQLSLAEDKYD
NAYAQLQETMRKLKELENESDSLRKELTDVRRQLTNCIAERDKYNSSCRELRDHVKRAEH
ERREAARARDEAYHKIAGLEENRTSLDLELSRVQTMLKESETGGEHVTRELKATESQLKR
ERAALEQANHDIKELQSRLQNESEERERCAGDAAAARRHGAELEAMLGAARADLAACRQR
AAELEEACRARDQELVLRLEDCRSKERRLEELKHNLEVCLADATQQIQELKARLGGSEGR
CRALEASLSQCESGKREAEAKLSSIAHALRRVCGVQPDGTVHAATRKRLASPARRYSPHR
GRDHSEDRNEIIDVDPELVKKGMRNLMHDVCQIEREKDDFKSQVNMLKKQLKDACEQQGK
GDNKLQSVTSNLRSLQEEKARLQTAYGQKEAQLNALNESVQSKTVEISNLRDKITSLEAT
LASVTEEKVQNENKGDNLRVQLAERVQEVGQLREALAAAEGRASRLDVRRAQLEGDVQRA
AAAARDRDQALKKLQERCEGYTRTIAQLEDRCTSLKGTVEQLSTALQKAATAESELRADL
GKVTRQLNEAKNNEHNAVDKLRQIQKSVSSCENERRVLTEKLESAKAALGEMKRLNSSLE
DQVHRLTNQLANVEVQRSAFESQLRMTTWDGKESNTDSELERELHQLQRDRSELKSKCEV
LQDTVRKLEADRRMRPALRSKSHDRGDKTVYYSDLDSGPDSTKDSSTTRGYKDSANIPCK
DKGFTTDISLIELENRELRMKIRRLEKELADKEAELVMARTRYLSDLSSVSPSRRGDVEH
YRQAALQAERLLESKEASYRQQIMRLESQASQLRSQLTAEIRRRQAYIARSGRAARDVQR
LRSALGDSLRTVSQDPALDSYTLEHEARKLDSTLTHSLPPLNDSYDSSK
NT seq
5910 nt
NT seq
+upstream
nt +downstream
nt
atggactctccgggggggagcgtcagcagcgatctgcggaggcagaacgaggagctgcgt
gctcgtctcgccggtgaggctgctgaccataagcggagactcgacgcttatcgcagagcg
cagcaaggccaagccgcgttggtgtccaggcttcagtccaaggtcctgcaatacaagcaa
cgatgctcggagctggagagccagatgttggagacgactccacgcagcgagccatcagcg
tcgtctacgttccgcgcgccgccgccggtcaagtccgggatagctctgccgccgccgccc
tccgccagcacctgtgcttcggctgccgtgtcagctgccgatgccaggatcacggatcta
gagaccgccttgaggcgcttggatgaggagaaacgcaagtgtgagaaactggtgcagcag
aacaacttgctccgggaccaactggaagagtctcaccaactgaacgaggctctcacgtca
gacttgcagaagctcaccaatgactgggaggctctgcgggatgagatggccatcaaggag
gatgagtggaaggatgaggaacaggcattcaacgactactactcaaacgaacaccaccgc
ctgctcagcttatggcgtgaggtagtagccgtcaagcgtcactttgctgaactgcagacc
aacactgaacgagacctgtaccgtgtgaagaatgagtttgattctaatgctagggagttg
gtgggcatgcttagcgggtattccatcaatgtgtttgcggctcagaatattaagccagag
taccagcccttatctcaccaggctgcctatcaaacaccacaaggtggttaccaggcctcc
caaccaggttaccaggccactcaaccaggttaccaggcctcccaacctggctaccaggcc
caaggtccccacgctcctggtctccaaggctcccaaggtcatggaactactggagcaggg
ccgtatacggtggagggtatgcgcgtagatctgcgcgatatgacggctcagagggattct
gcgctcgcagagttgagagaacgagatgcgaggatacaacgtctgcttggagaactgcag
gaattggaggagcggtgtggctgcgcagaggcagcgtgtggctcagccagcgtgatgcgc
gcggcgctggaggaggtggcgcgcgcgctcatacacgactccgacagcgacgcgccgccc
gcgcatcccgcgcatctacatctgcacgacaggtcaccgaaacgcataccaaccaacgcc
aacgcgacggcattcgcagagagcacaatatcagctgtccaagctgcgctccacaagtat
cagatacaaatacatgagctccaagtgaagctgcagaattctcgcgagcagttagctact
tgcaggaaacacggtgaagcggctgaaatcaatgtcgcctctttggaaagcaaggtccag
gatctacaaggtaaactagaccaagccaacgcggatgttcatcaaatgttacaagagaag
gagtcgatgcagaaaacggtagaagcacttcgcagcgacaagaataacttggagagaaat
agagtggagattaatgctatggtggaatctctaacatcagactacgagaagctacagaag
ataaactctcggctagagaagactatcgaagcgttagagagtgagaagaggaacttgaat
gatgaagtggatcatttacacagagaggcgtctagtagggaggcggtgttgagggccgaa
gaagaacgttcttcccgtctccgctcagaactggtgtcgactagagaggagctcaacaag
accgctctagcacgggacttgctcgaccagcagaagattgagggagacagcatactgtcg
cagatggagaaacataggagtgatctagaaatagagctagaaagaactcttatggagaga
agtgacttacaagacctcgtggagaagttggaagcagctgtcagaaacctcgaaagcgat
aagaagaaactgcatgaagatgttaaacatttggaagacgagaaatcaaacctgtcgagt
caatcatcagaacagcaaggagatcttaactctttacgcaaagagctgctcgcggctgaa
caaactaggatggagttggaggcagataaggcatcgctgtgtgagaagatcaagttcctt
gaaggagagagagataaagtggagttggaattgcgacaggttatgagggaacgaggcgaa
ctaagttcccagctaacagcgatggttcgcaagaaagatacacttaacgaagagatcata
cgcctacaacagcgattggaacaggccaatgagactattggtagaattaacagagcttta
gaagatcatgtcaaagatggggaagagaaacagattctaatagacagcctcgaaaaagac
aagcatcacttacaagaacaattagcaggagttcgttcagagaaggacgctttagaagca
gtcctgttcgacacggctaacatgttggaagatactgacaacaagagggccaagctcgaa
catgagctgcaagagacattagtgcagcaagagaattataaaggtcaaatcgcccgcctc
acaaaagacctggagaacagcgagcgcaaactccgcgacactcgcaactcgatgtcgcag
gcttccggcaagaaggaggcagagtaccagcagattatatctaacatcaaccgcactact
actgagaatatcaccaagttaaaggaggagaaggaacaactccggcaagctctcgaacac
aagctcagccagaccatagcggcactaaccagcgagaaagaatcatgcgaggcgggtgcc
cgagagagggagaagaagttactcatagcgagggaccagctgatattgcagcacgatgaa
gccatgctcagggctgagaatgataagcagcaggctttacttatggcccaccaagaacag
caagctcttctagaacgtctagaagaagcgaaacgagcgttcgacctcgaacagaacaag
ctcgagcgagtgcggcgcgacgcgcatgcgcgagccgaacaggaccgcacctatgtcaac
cagctgaaggatgagatcgccgcgcttaagaccaggctggatgaggctaaggccacagca
gaagacgaatgcgcccgcttcgagaaccgcatcaaggagctacacttagaaaaggaggcg
gttatgcgcgaatgtaccgagatccgcgcccaattgtcattggctgaagacaagtatgac
aatgcgtatgcacagttacaggagaccatgaggaagttgaaagagttggagaacgaatcg
gacagtctgcgcaaggaactgacggacgtccgtcgccagctaacgaactgtatagctgaa
cgcgacaagtacaacagcagctgtcgcgaactgcgcgaccacgtcaagcgagctgagcac
gagcgaagagaggcggccagagccagggacgaggcttatcataagattgctggcctcgaa
gaaaaccgcacatccctcgatttagaactgtcccgcgtacaaaccatgttgaaggagagt
gagacgggcggggaacatgtcacccgagagctgaaggccactgagagtcagctgaagaga
gaacgagctgctttggagcaggctaatcatgatattaaagagttgcagtctagactacaa
aacgagagcgaagaacgcgagcgttgtgccggcgacgcggccgctgcccggcggcacggc
gccgagctggaggccatgctgggcgccgcccgcgccgacctggccgcctgcaggcagcgg
gctgctgaactggaggaggcctgtagagctagggaccaggagttagtcctacgactagaa
gactgtcggtcgaaggagcgtcgtttagaagaactcaaacataacctcgaggtgtgcctc
gctgacgccacgcagcagatacaggaactcaaggctcgtctgggcggcagcgagggtcgt
tgccgagccctagaagcgtccctctcgcagtgcgagagcggcaagcgcgaggcggaagcc
aagctgtcgtccatcgcgcatgcgctgcgccgggtctgtggcgtgcagcccgacggcacc
gtgcacgccgccaccaggaagcgcctcgccagccccgccaggagatacagcccgcataga
ggacgcgaccattccgaggatcgcaacgagataatagatgtggacccagaactggttaag
aaaggcatgcgtaacttgatgcatgatgtctgccagattgaacgggagaaggatgacttc
aagtcacaagtgaacatgctaaagaaacagctcaaagatgcctgtgaacagcaaggcaag
ggtgacaacaagctgcagtcggtcaccagcaacctgcgcagcttgcaggaggagaaggcg
aggctgcagaccgcgtacggacagaaggaggcgcagctcaatgctctgaatgagtcagtg
cagagtaagacagtggagatcagcaacttgcgagacaagattaccagtcttgaagctacg
ttggcgtctgtcacggaagagaaagtacagaatgagaacaaaggcgataatctgcgagta
cagttagcggaacgtgtacaagaagtaggacaactccgggaagcgcttgctgcggctgaa
ggccgcgcgtcccggctggacgtgcggcgcgcgcagctggagggcgacgtgcagcgcgcc
gccgccgccgcgcgggaccgcgaccaggcactgaagaaactacaagaacgttgcgaaggt
tacacccgcactatcgcccaactagaagacagatgtacctccctcaagggtaccgtagaa
caactatcaacagccttacaaaaggcagccacggccgagtcggagctgcgagccgacctc
ggcaaggtcacgaggcagttgaacgaggcaaagaataatgaacataatgctgttgataag
ctgaggcagatacagaagagtgtttcgagctgtgagaacgaacgcagggtactaacagag
aaactagagagtgccaaggcagcgctaggagagatgaagagactcaactcttcactagaa
gaccaagtgcacagactcactaaccagttagcgaatgtagaagtgcaaaggtcggccttc
gaatcccaactccgcatgacgacatgggacggcaaagaaagcaatacagacagcgagctc
gaacgcgaactacaccaactacaacgggacagatctgaactgaagtccaagtgcgaagtc
ctgcaggacacggtgcgaaagttggaggccgaccggcgcatgcggcccgcgctgcgcagc
aagagccacgaccgcggggataagactgtttactactctgatttagattcaggtccagat
tcaacaaaggactcatcaacaacgcgaggttataaagactcagccaacattccatgcaag
gacaaaggttttaccaccgacatcagtcttattgaattggagaacagggagctcaggatg
aagatacgacgcttggagaaagagttagcggataaggaggcagaactagtaatggctaga
acccggtacttatccgacttatccagcgtatctccttcacggagaggcgatgtggaacat
tatagacaagccgcgttacaagccgagagactgttggagagcaaggaggccagctatagg
cagcagattatgaggctggagtcacaggcttcccaacttcggtcacagctaacagcggag
atccgtcgtcggcaagcgtacatagcccgtagtggtcgcgccgcccgcgacgtgcagcgc
ctgcgctcagctctcggggactcgctgcggactgtctcacaggacccagcgttagactcg
tacacgttggagcacgaagccagaaagctggacagcacgctcacccatagtcttccgccg
ctgaacgacagctacgactcgtccaaataa
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integrated database retrieval system
