Helicoverpa zea (corn earworm): 124634414
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Entry
124634414 CDS
T08400
Name
(RefSeq) polyadenylate-binding protein 1
KO
K13126
polyadenylate-binding protein
Organism
hze
Helicoverpa zea (corn earworm)
Pathway
hze03015
mRNA surveillance pathway
hze03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124634414
09123 Folding, sorting and degradation
03018 RNA degradation
124634414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hze03019
]
124634414
03041 Spliceosome [BR:
hze03041
]
124634414
Messenger RNA biogenesis [BR:
hze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
124634414
mRNA cycle factors
Stress granule specific factors
124634414
Spliceosome [BR:
hze03041
]
Complex C
Other components
Complex C specific factors
124634414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RBD_DEAH11
RRM_7
RRM_occluded
RRM_MARF1
RRM_3
POP1_C
Lysine_decarbox
Motif
Other DBs
NCBI-GeneID:
124634414
NCBI-ProteinID:
XP_047025947
LinkDB
All DBs
Position
1:complement(7634604..7641071)
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AA seq
611 aa
AA seq
DB search
MNPGPPNYPMASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFS
AFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKER
EKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGTSRGFGFVAFE
DPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYV
KNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIV
GTKPLYVALAQRKEDRKAHLTSQYMQRMASMRMQQMGQIFQPGGAGGYFVPTIPPAQRFY
GPAQMTQIRPSPRWTAQPPVRPSTQTAASGYPNMQAPFRPAPRAPTQAALRTSLGARPIT
GQQGVAAAGSIRAPLVTQSGRPAGYKYTANMRNPPAPQPAVHIQGQEPLTSTMLAAAPLQ
EQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQA
HQAKQQATKKE
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctggtccacccaattaccctatggcatctctgtatgtcggggatttacactcc
gatattaccgaggccatgttgtttgagaaattttctaccgctggtccggtcctttcaata
cgcgtatgtcgcgatatgataactcgcagatccttaggctatgcttatgttaactttcag
caacctgccgatgctgaaagagctttggacactatgaattttgatatgatcaaaggaaga
cctattagaatcatgtggtcccaacgagatccatctcttcgcaaatctggcgttgggaat
gtttttattaaaaatcttgacaaaaccattgacaacaaagccatgtatgacactttttct
gcatttggaaatattctaagctgcaaagttgctcaagatgaaacaggtgcctctaaggga
tatggatttgttcattttgagactgaggaggctgctaacaaatccatagaaaaagtaaat
ggaatgcttttaaatgggaaaaaggtttacgtgggtagatttattccacgtaaggaacgt
gaaaaggaactcggtgaaaaggctaagttgttcaccaatgtgtatgtcaagaactttgga
gaagattttagtgatgaaatgcttaaagacatgtttgaaaaatatggccgaattaccagc
cataaagtaatgtataaagatgacggaacatccagaggtttcggattcgttgcatttgaa
gatccagatgctgccgagagagcatgcatggagttgaatggaaaagaacttgttgaagga
aagcctttatatgtaggacgggctcaaaagaaagcagaacgccagaaagagctaaagcgt
aagttcgaacagttgaagtctgagcgattgacacgttatcaaggcgtcaacctgtatgtt
aaaaacttggatgatactattgatgatgaacgtctccgtaaagaatttgctccctttgga
actatcacttcagctaaggttatgttggaggatggacgcagtaaaggttttggatttgtt
tgcttctcatctccagaggaagctactaaagctgtaacagaaatgaatggtcgtattgtt
ggaacaaagcctttgtatgttgctttagctcagcgcaaagaagatcgaaaggcccacttg
acttcacaatatatgcaaagaatggccagcatgcgcatgcagcaaatgggccaaatattc
caaccgggtggtgcaggaggatattttgttccaacaattcctccagctcaaagattctat
ggcccagctcagatgactcaaataagaccatcgccgcgttggactgcacagccacctgtc
agacccagtactcaaacagctgcatcaggatatcccaatatgcaagcgcctttccgacct
gcacctagggctccaacacaagcagcacttcgtacatctcttggggctagacctattaca
ggacagcaaggtgtggctgctgcaggctctattcgtgctccacttgttacgcagagtggc
cgccctgcaggttataagtacactgctaacatgcgcaatccgccagctccacaaccggct
gtgcatatccagggccaagaacccttaacatcaactatgttagctgctgctccgcttcaa
gaacaaaagcaaatgcttggagaacgtttgttcccactaattcaaaggatgcatccagat
ttggctggaaaaattacaggaatgcttttggaaattgataattcagaactactacatatg
ttagaacatggagagtcactgaaagctaaggttgatgaagccgttgcagttttgcaagct
caccaggctaaacaacaagctactaaaaaagaataa
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