Helicoverpa zea (corn earworm): 124634770
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Entry
124634770 CDS
T08400
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
hze
Helicoverpa zea (corn earworm)
Pathway
hze03018
RNA degradation
hze03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124634770
09123 Folding, sorting and degradation
03018 RNA degradation
124634770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hze03019
]
124634770
03041 Spliceosome [BR:
hze03041
]
124634770
Messenger RNA biogenesis [BR:
hze03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124634770
mRNA degradation factors
5'-3' decay
Lsm complex
124634770
Spliceosome [BR:
hze03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
124634770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Gemin6
Motif
Other DBs
NCBI-GeneID:
124634770
NCBI-ProteinID:
XP_047026396
LinkDB
All DBs
Position
11:complement(4618991..4619489)
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AA seq
96 aa
AA seq
DB search
MASGLENYVNQTVSVITSDGRNFIGTLKGFDQTINIILDESHERVFSSSTGVAQVVLGLH
IIRGDNVAIVGQIDESIDSRLDLGNIKAEPLGSIVH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgggactggaaaattatgtgaatcaaacagtgtcagtgataacttcagacggc
cggaattttattggaactttaaaaggttttgatcagacgataaacattatattggatgaa
tcccacgagcgagtgttctcttcttcaactggtgtggcgcaagtggttcttggacttcac
ataatacgcggcgacaatgtagcgatcgtcggccaaatagacgaatctattgatagcaga
ttagaccttgggaatataaaggcagaacccttgggttctattgttcattag
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