Helicoverpa zea (corn earworm): 124634883
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Entry
124634883 CDS
T08400
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
hze
Helicoverpa zea (corn earworm)
Pathway
hze03022
Basal transcription factors
hze03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124634883
09124 Replication and repair
03420 Nucleotide excision repair
124634883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hze03021
]
124634883
03400 DNA repair and recombination proteins [BR:
hze03400
]
124634883
Enzymes [BR:
hze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
124634883
Transcription machinery [BR:
hze03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
124634883
DNA repair and recombination proteins [BR:
hze03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
124634883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
Motif
Other DBs
NCBI-GeneID:
124634883
NCBI-ProteinID:
XP_047026504
LinkDB
All DBs
Position
12:7555085..7564154
Genome browser
AA seq
782 aa
AA seq
DB search
MGPPKKFKKYDSRTGSDRSGKKKKVEEEMTIDLVDDDNSENVGVPGAAMQDAEKNDQVPE
DEFGAKDYRSQMALKADNASRPLWVAPNGHIFLEAFSPVYKHAHDFLIAIAEPVCRPQHI
HEYKLTAYSLYAAVSVGLQTADIIEYLQRLSKCAVPAGIIEFIQLCTLSYGKVKLVLKHN
RYLVESKHVEVLQKLLKDPIIQQCRLRRDGDDDFLSSALPDKPSTALKPGETSDKPPPAN
GTVPDDISQFYQQLDKEDDDDDVTDITANTAVAFEVDPDKIEVIQKRCIELEHPLLAEYD
FRNDSINPDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAVCT
VRKRALVLCNSGVSVEQWKQQFKCWSTADDSMICRFTSEAKDKPMGAGILITTYSMITHG
QRRSWEAEQTMKWLQAQEWGLVVLDEVHTIPAKMFRRVLTIVHSHAKLGLTATLLREDDK
IADLNFLIGPKLYEANWLELQANGYIARVQCAEVWCPMTPEFYREYLIQKINKKMLLYVM
NPSKFRACQFLVRYHERRGDKTIVFSDNVFALRHYAVKMNKPYIYGPTSQSERIQILQNF
KFNPKVNTIFVSKVADTSFDLPEANVLIQISSHGGSRRQEAQRLGRILRAKKGALAEEYN
AFFYTLVSQDTLEMAYSRKRQRFLVNQGYSYKVITELKGMDTEPDLLYGTREEQGMLLQQ
VLAASETECEEEREGGAGGAGGGAARRPGALASLAGADDALYLEHRRNNSGQKHPLFKKF
RY
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgggtcctccaaagaagttcaaaaaatatgattcaagaacagggagtgatagatcaggc
aagaaaaagaaggtggaagaagagatgaccatagatttagtagatgatgacaactctgag
aatgttggtgtgccaggcgctgccatgcaggatgcagagaagaatgatcaagtgcctgaa
gatgaatttggtgccaaggattatagaagtcaaatggccttgaaggctgacaatgcaagt
cgtcctttgtgggtggcaccaaatggtcatatattcttggaagcattctcgccagtctac
aaacatgcccacgatttccttattgctattgcagagcctgtgtgccgtccgcaacacatc
catgagtacaaactgacagcttacagtttatatgctgctgtgtccgtgggtctccagact
gcagacattattgagtacctgcaaagactcagcaagtgtgctgtccctgctggcattata
gagtttattcagttgtgtacactgtcttatggaaaagtgaagcttgtgctgaaacataat
aggtatctagtggagagtaaacatgtggaagtcctacagaaattgctcaaggatccaata
attcagcaatgtcgattgcgtcgcgacggcgatgacgacttcttatcgtcagcactgccc
gacaaaccatctactgcacttaaaccaggcgagaccagtgacaaacctccaccggctaac
ggcactgtcccagatgatatcagccagttctaccaacagttagacaaggaggatgatgat
gatgacgtaacagatattaccgctaataccgccgtcgcattcgaagtcgaccctgataaa
attgaggtaatacaaaagcgttgcatcgaactagaacacccgttactggctgagtacgac
ttccgcaacgacagcatcaatcctgacattaacatcgacctgaagcccaccgcggtgctg
cgtccctatcaggagaagagtttgcgcaaaatgttcggcaacggacgtgctcgttcaggc
gtgatagtactcccgtgcggcgcgggcaagtcgctggtgggcgtgacggcggtgtgcacg
gtgcgcaagcgggcgctcgtgctgtgcaactccggcgtctccgtcgagcagtggaagcag
cagttcaagtgctggtccacggctgatgatagcatgatctgcagattcacatcagaagcg
aaagacaagccaatgggcgcgggcatcctgataacaacatactctatgatcactcacgga
cagcgtcgctcgtgggaggcggaacagaccatgaagtggctgcaagctcaggagtgggga
ctggtcgtgttggacgaggtgcacactataccggccaaaatgttccgcagagtgctcact
atcgtgcactcgcatgctaagctcggtctaacggcaaccctacttcgagaggacgacaag
atcgccgatctaaacttcttgatcggtccgaagctttacgaggcgaactggctggagttg
caagcgaacgggtacattgctcgggtgcagtgcgctgaggtgtggtgtcccatgacgccc
gagttctacagggaatatctcatacagaaaataaacaagaaaatgctgttatacgtaatg
aacccatcaaagtttcgagcgtgtcagtttttagttcgttaccacgagcggcgcggggac
aagaccatagtgttctcagacaatgtgttcgccctccgacactacgccgtcaaaatgaac
aaaccttacatctacgggcccacctcacagagcgaaaggattcaaatattgcagaacttc
aagtttaaccctaaagtcaacacgatatttgtcagtaaagtcgccgatacaagttttgat
ttgccagaagctaatgttttgattcaaatttcgtcacacggtgggtcgcgtcgacaggaa
gcccagagattgggtcgtattttgagagcgaaaaaaggcgcgttagctgaggagtacaac
gctttcttttacaccttggtgtcacaagatactttagaaatggcatacagtcgcaagcga
caacggtttcttgtcaatcagggttacagttataaggttatcactgaactaaagggaatg
gatacggagccggacttactctatggtacacgagaagaacagggcatgcttcttcaacag
gtgctcgcagcatcggagacggagtgcgaggaggagcgcgagggcggcgcgggcggcgcg
ggcggcggcgcggcgcggcgcccgggcgcgctggcctcgctcgccggcgccgacgacgcg
ctctacctcgagcacaggcgcaacaacagcggccagaagcatccgctcttcaagaagttc
cgatactaa
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integrated database retrieval system
