Helicoverpa zea (corn earworm): 124634997
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Entry
124634997 CDS
T08400
Name
(RefSeq) ATP-dependent RNA helicase p62
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
hze
Helicoverpa zea (corn earworm)
Pathway
hze03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124634997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hze03041
]
124634997
03009 Ribosome biogenesis [BR:
hze03009
]
124634997
Enzymes [BR:
hze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124634997
Spliceosome [BR:
hze03041
]
Complex A
U1 snRNP components
U1 related factors
124634997
Complex B
124634997
Ribosome biogenesis [BR:
hze03009
]
Eukaryotic type
Pre-60S particles
Helicases
124634997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
124634997
NCBI-ProteinID:
XP_047026682
LinkDB
All DBs
Position
12:complement(6251228..6255624)
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AA seq
559 aa
AA seq
DB search
MSSSWNNSRGGSGGSKFGGERKFGSSNGSSRFSNGGSKFGGSGGGGGNRFGGSGGGFGGG
GGKKDFTGGQNMRRPNWDTMSLQPFNKDFYNPHPTVLNRSPYEVEEYRSKYEITVSGLDI
PNPIQNFDEANFPDYVNQSITNMGYKDPTPIQAQGWPIAMSGKNLVGIAQTGSGKTLAYI
LPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASDFGNSAYVRNTCVFGGAPKRE
QGRDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI
RPDRQTLMWSATWPKEVRKLAEDYLGDYLQINIGSLQLSANHNILQIVDVCQEHEKENKL
NVLLQEIGQSQEPGAKTIIFVETKRKVENITRNIRRYGWPAVCMHGDKTQQERDETLYQF
KQGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTP
SNSRQAKDLVSVLQEANQVVNPQLQTMADRCGGGGGGWNRNRYGGGRGGGGSFKRGSNFG
RGNGGGSNGGAGHKRFNDY
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtagttggaacaatagccgtggtggaagcggtggttccaaatttggcggagaa
aggaagttcgggagcagcaacggctcatcacgattcagtaatggaggatcaaagttcggc
ggtagtggaggcggcggtggcaacagatttggtggttctggcggcggttttggcggcggc
ggtggcaagaaagacttcactggcggtcaaaacatgcgccggcccaactgggatactatg
tctctgcaaccattcaacaaagatttctacaacccacacccaacagttctaaacagatct
ccctatgaggtagaggaatatagaagcaaatatgagatcactgtcagtgggctggatatc
ccaaaccccattcagaattttgatgaagccaattttcctgattatgtcaatcaaagcata
accaacatgggatacaaggacccaacacctatccaagcacaaggctggcctattgctatg
tctggaaagaacttagtaggcattgcccagactggctcaggaaaaactctggcttacatt
ttacctgctattgtgcatatcaacaaccagccccctattaggcggggtgatggtcccatt
gctttggttcttgcaccaactcgtgaattagcacaacaaatccaacaagttgcttctgac
tttggtaactctgcctatgtccgtaacacttgtgtatttggtggtgcacccaagagagag
caaggccgtgacttagaacggggtgtagaaattgtaattgctacccctggtagattgatt
gatttcttagaaaagggtaccacaaatttgcagagatgcacatatttggtcctagatgaa
gctgaccgaatgttggacatgggttttgaaccccaaattagaaaaatcattgaacaaatt
cgccctgatagacaaactttgatgtggtcagcaacatggccgaaggaagtaagaaaatta
gctgaagattacctgggagattacctccaaattaacattggatcactacagttatcagct
aaccacaacatcttacaaattgtagatgtttgccaggaacatgaaaaagaaaacaaatta
aatgtacttttacaagaaataggacagagtcaagagcctggtgccaaaacaattatcttt
gtagaaactaagaggaaagtagaaaatatcactaggaatataagacgatatggatggcct
gcagtttgtatgcacggtgacaaaactcaacaggagagagatgaaacactatatcaattt
aagcaaggccgtgccagtatacttgttgcaactgatgttgcagccagaggacttgatgtt
gatggaataaaatacgttattaactttgattatcctaactcatctgaggattacattcac
cggattggcagaacaggacgttcaaaatcaaaaggcacatcttatgccttctttacaccc
tccaactctcgtcaagccaaagaccttgtgtcagttctacaagaagctaatcaggtggtg
aaccctcaactccaaaccatggccgaccgctgcggcggtggaggcggaggctggaacaga
aacagatacgggggtggccgcggaggcggcggttccttcaaacgtggaagcaacttcggt
aggggaaatggtggcggcagcaacggtggtgcaggccacaagagatttaatgactattaa
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