Helicoverpa zea (corn earworm): 124635031
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Entry
124635031 CDS
T08400
Name
(RefSeq) nucleoporin Nup188
KO
K14311
nuclear pore complex protein Nup188
Organism
hze
Helicoverpa zea (corn earworm)
Pathway
hze03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124635031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hze03019
]
124635031
Messenger RNA biogenesis [BR:
hze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124635031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Motif
Other DBs
NCBI-GeneID:
124635031
NCBI-ProteinID:
XP_047026742
LinkDB
All DBs
Position
1:complement(4011490..4028240)
Genome browser
AA seq
1832 aa
AA seq
DB search
MAVNGISYWKRLWRWTTSESFSNEELASVLGDKEVVECLKQGLASYKPLKAEAFAQLQSK
HADQTKLMSVVQTLQNYIDVDCFQIWEIMKNYLCDISYGTPANALKNVAFVDTRPVFLLP
NVWTFYYAERLFMLKLLQYIVQFRDDPNHTYNEQFKKIIKDIGMQNLKTSLISQFEKLLN
TAPPSRRMQKDFSIENIRQEWADCNMREQLAILQILLLIAEEDIFSESEFNRLFSLFRKH
GFGKSQGYSELLEERHREACMRIMYMEVCIFMVIADSMKINNLSGWIDGTKEVVESELTK
LHMNPEHSAMLITWMMLTLQSDHHVKLFESQYQHFGATALRMQVFEFLLQMLNSSVFNDK
SKCAIIARQRVFRLLNDLCDKFDGDGTLSHQAGIMLLCSHLLSAPEINCQFWKLHQREDN
CGVVSLWNTALEYFPFNFNALSILASGIAQGSKCSVLNLLDELKNLPVYTEIYNPNAVPV
MSLRDDDAIIGREYYPLGDPSYRIEMGSKATIMERKEATMIHFRTPYSYWTVFNSEIEKA
MDRKQHHQNNIDVTLERIYQGTKVLKGVLKALVADKEIPKSLVGPSEGVFDVLVRFMRAD
APPLALLVECLDVCTALVPVFPKEIHLRLINTGLLPRVINQKLSYQEYANGASFDSAAVG
SYLVTIEQLSGTYKFLGAYIDLLCAFYEKASDDERINKEIILPGLILIVREVFPNVYSWR
YSNTRERRDMIQRCANFLTLVLQDTKCPCNLLLKQTCVYSLLHTENALELLKFISVGNDQ
LESVIRNETNWISGTGSQYISTIQRCVAIVIFALRLKTMVTEATEMTPLEHLIFAQNKQK
DSLKVVPRVTSYINHSFNKSLPVLSCRLLKKFADGFQMSLFASLDMTAYQVRVMFLDRLR
DEYETIGLKVAILEFVATCVGTQPGLTEAFFMMNHEHKMDTGEDDKEKKADEKKPESDDS
FEGILGYMADYLGTVKSNPKLLHSPLLSCIMALFHALWKNNMQILVKKLRENPKFWEHMT
SPLFSEIQPGLRTYSQIFNVLGIELFVSRDKLEPNLKEMLEQFFDTNKKHLDRWIDYIFS
FNGRTDGEEAVDKVPVWLGLLTSWKDFITIFCKCLPITLNIAHKAKMVAPCMSALLNELD
DLKDGRLVVILAELYVIMLANWKDDCFDNRKASAKQVDNLLTNTAIVYECLHPRAIRAIL
SICTVAISSLDYEIKANSVTAQNIIRSVTNINSLELEKLLDDIKDDPKPAEPKVNGHAVN
ENIPPVVLSLAMLEQCLDLYDDMFSGLSQWFQSSRFINKILCCLQTCLQNRRHYHTSLAA
LRCLTAYSRGPFSKDLLMSDVDQFLWLQLLPPKFDGDSSWKPQEWWRVYAYSLDFISMMV
MKHGQFFASDAITFVGVHLEHLIEAVLLPRQVFNIDALNLCASTLNLVVQLVKFEARWRI
QNITSLTGIMRSISACLYQCVTLMMRSRRSADPALPPTEDAQSQNPNVLHRTLEILHMAT
LCLLSFSPELLSLLADPGLDLERWQPLVELHFGAPKISYEPFPQLTFGTLVSAICLLTRS
LNHAYHSEEGYGSRSPRGRRRACSCGSPAAERRAARSESLTSISSAASLPALDERLVAGA
LDASATLLASQALLAVRDPSVPTRHKQLIRRELSSELTMFHDFVRKRILCAAHARPHLVR
NKLGAWPLAANEEETKRIEEARKEGTHCNCDNDDDRTLPPPPPPKRAAHDSMREYILRKH
YLDKCAQTPTKGPPSPVSHSTPTSDKKKETARSSKRVSWAETTRDSDESLDSSLQEIEEP
AYSNLTDVQINNDEDYFHFMSVVFLYICQTEL
NT seq
5499 nt
NT seq
+upstream
nt +downstream
nt
atggctgtaaatggcataagttactggaaacgattatggcgctggaccacatctgagagc
ttctcgaatgaagaattagcctctgtacttggtgacaaagaagtggtagagtgcttgaaa
caaggtctagcgagctataaaccacttaaagctgaagcttttgctcagctgcaaagcaaa
catgcagaccaaaccaaactgatgagtgtggtccaaacgcttcagaactatatcgatgtg
gattgctttcaaatatgggaaattatgaaaaattacctgtgtgacatatcttatggcact
cctgcaaatgctctgaaaaatgtagcctttgttgatactaggccagtattcctgctgcca
aatgtgtggaccttctactatgctgagagattgttcatgctcaagttgttacaatacatt
gtgcagttcagagatgatcccaatcacacgtataatgagcaattcaagaaaataatcaaa
gacataggcatgcagaacttgaaaacgtcacttatttctcagtttgaaaaattgttaaac
acagcgcccccttcaagaagaatgcagaaagatttttctattgaaaatattagacaggaa
tgggctgactgtaatatgagggagcaactggcaatcttacaaattctgctgcttattgct
gaagaagatatcttcagtgagagtgagttcaacaggctgttctcattgttcaggaagcat
gggtttggtaaaagtcagggttacagtgagcttctagaggagaggcacagggaggcttgt
atgagaatcatgtacatggaagtatgcatttttatggttattgcagacagtatgaaaatc
aacaacttgtcaggttggatagacggcactaaggaggtggttgagagtgaactcacaaag
ctgcacatgaaccctgagcacagtgccatgctcatcacttggatgatgctcactcttcag
agtgatcaccatgtaaaattatttgagagtcaatatcaacactttggtgctacagctctg
agaatgcaagtctttgaatttctcttgcaaatgctgaatagttctgtatttaatgataaa
tcaaaatgtgcgatcattgctcgacaaagggtattccgactcttgaacgatctttgcgac
aagtttgatggtgacggtaccttgagccaccaagcaggcattatgctactgtgttcacac
ctcctgtctgctcccgagatcaactgtcagttctggaagctgcaccaacgagaagacaat
tgtggagttgtgtcactgtggaatacggctctggaatactttccgttcaactttaatgcc
ctgtccattttagctagcgggattgctcaaggttcaaaatgcagtgtattaaacttatta
gatgagctcaagaatctgccagtgtacacagaaatctacaatccaaacgcagtacccgta
atgtcactgcgagacgacgatgctataataggtagagaatattaccccctaggtgacccc
tcatatcgcatcgagatggggtctaaagctaccataatggaacgaaaggaagcaacaatg
atccacttccgaactccttattcttactggactgtatttaatagtgagattgagaaagcg
atggataggaaacagcatcatcagaataatattgatgtaactctagaaaggatctaccag
ggtacaaaagtgttaaagggtgtgttaaaagcgttggtagctgataaagagataccaaag
agtttggtggggccgagtgagggagtctttgatgtgctagtgaggttcatgagagctgat
gcaccgcctctggctcttctagtcgagtgccttgatgtttgtactgcactggtgcctgta
tttcccaaggagatccatttaagactgataaacacaggactgttaccgcgcgttatcaac
cagaaattatcgtaccaagaatatgcgaatggtgcttcgtttgactcagcggctgttggt
tcttacttagtcactatagaacaattgagtggcacttacaaattcttgggagcttatatt
gatctgctttgtgctttctatgagaaggcatcagatgatgaacgtatcaacaaagaaatc
attctcccgggcctcatattaatagttcgggaagtgttcccgaatgtatacagttggcgt
tacagcaacactcgggaacgccgcgacatgatacaacgttgcgccaatttcttaactctc
gtgttgcaagacactaagtgtccatgcaacttgttgctgaaacagacttgtgtatacagt
ttgttgcacactgagaatgctctagaactcttgaagtttatttctgttggtaatgatcaa
ttagagagcgtaataagaaacgaaacaaattggatctctggtactggatctcaatacata
tcaactattcaacgatgtgtagcaatagttatattcgccctccgtctcaaaacaatggtg
acggaagctacagaaatgacgccgttggaacatctgatcttcgcacagaataagcagaaa
gattctttgaaggttgttccgagagtgactagttatatcaaccattcgtttaataagagc
cttcctgtgttaagctgtcggctgctcaagaaattcgctgatggcttccaaatgtccctc
tttgcgtccttagacatgactgcttatcaagtccgtgtgatgttcctcgatcgcctccga
gacgaatacgaaacgataggtttgaaggtcgccatattggaattcgtggccacttgtgtt
ggcacccaaccgggactaaccgaggcgttcttcatgatgaaccatgaacataaaatggat
actggagaagatgataaagaaaagaaagcagatgaaaagaaacctgagagtgatgatagt
tttgaagggattttaggttatatggctgattatcttgggactgtgaagagtaacccaaaa
ttactccacagccccttactatcatgtatcatggctctcttccatgcactatggaagaac
aatatgcaaatactagtcaagaaattacgcgagaaccccaagttttgggagcacatgacc
agcccactgtttagtgaaatccagccaggtctaagaacatactcacaaatattcaatgtg
ctcggtatcgaactgttcgtctccagagacaaacttgagcctaacttgaaagaaatgctt
gaacaatttttcgataccaacaagaagcatttagatagatggatcgactacatattttca
tttaacggtagaacggatggcgaagaggcagtggataaagtgcctgtttggcttgggcta
ttaacgtcttggaaggatttcattactatattctgcaagtgcctgcctatcactctaaat
attgcacacaaagctaaaatggtcgcgccttgcatgagcgcacttctaaacgaactcgat
gacttgaaagacggacgtctagtcgtcatattagcagaactgtacgttataatgctagcg
aactggaaagatgactgtttcgataacagaaaagcaagtgccaagcaagtggacaattta
ctgaccaacactgctatcgtctacgaatgtctgcacccgagagcgattcgcgccatactt
tcaatatgtactgtggctataagtagcttggactacgaaattaaggctaacagtgtaaca
gcacagaatattataagatcggtgacgaatatcaacagtttagagcttgagaaactgcta
gatgatataaaagatgatccgaagcccgctgagcctaaagtgaatggtcacgcagtcaac
gagaatattcctccagtggtattatcgctggcgatgttggagcagtgcttagacttgtac
gacgatatgttctcaggactctctcaatggttccaatccagcaggttcatcaacaagatt
ctctgctgtctacaaacatgtctgcagaacagacgtcactatcatacttctttggctgct
ttacgttgtctgactgcgtattcccggggcccattctcaaaggatcttttgatgagtgat
gtggatcagtttctatggctgcagttactgccgccgaagttcgatggtgattcgtcatgg
aagccgcaggaatggtggcgggtgtacgcttacagtttagacttcatttctatgatggtg
atgaagcacggccagtttttcgctagcgacgcgataacattcgttggggtgcacttagag
catctgattgaggcggtgctgttgccgcgtcaggtattcaacatcgatgctttgaacttg
tgcgcgtctacccttaacttggtcgtacagttggtcaagtttgaagcaaggtggagaatc
cagaatattacttctttaactgggattatgcgaagtataagcgcatgcctataccaatgt
gtgacactcatgatgcgctcgcgtcgctctgcggatccggcactcccgccaacagaagac
gcacaaagccaaaatcctaatgtactgcatagaacgttagagatcttgcacatggcaaca
ctgtgcctcctgtcattcagtccggagttgctgtcgctcttagccgaccctggtttggac
ttggagcgctggcagcccctcgtcgagctacacttcggagcacccaagatatcctatgag
cctttccctcagctaacctttggaaccttggtgtccgccatatgtctgcttaccagatct
cttaatcatgcataccactcggaggagggttacgggtcacggtctccgcgcggacggcga
cgcgcgtgctcgtgcggcagcccggccgccgagcgccgcgcggcccgcagcgagtcgctc
accagcatctcctccgccgccagcctgcccgcgctcgacgagcgcctcgtcgccggcgcg
ctcgacgccagcgccacgctgctcgcctcgcaggccctacttgcagtacgagaccccagt
gttccgacacgacacaaacaactcattcgtcgcgaactgagctctgagctgaccatgttc
cacgattttgtccgcaagcggatcttgtgtgctgctcacgcacggccacaccttgtacgt
aataaactcggcgcgtggcctcttgctgccaacgaggaagaaacaaaacgcatagaggaa
gccagaaaagaggggacccactgcaattgtgataacgatgatgacagaacgctgccccca
ccaccacctccaaaaagggcggcccacgattcaatgcgcgagtatatacttcgaaaacat
tatctcgacaaatgtgctcagacaccaactaagggcccgccttctccggtgtcccattcc
acaccgacatccgataagaagaaggaaactgctcgaagttctaaacgcgtgtcctgggcc
gagacgaccagggatagcgatgaaagtttagacagttcgttacaagaaatcgaagaacct
gcttactctaacttaactgatgtacaaattaataatgatgaagattactttcacttcatg
tcagtagtattcctttacatttgtcaaacagagttataa
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integrated database retrieval system