Helicoverpa zea (corn earworm): 124635032
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Entry
124635032 CDS
T08400
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
hze
Helicoverpa zea (corn earworm)
Pathway
hze03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124635032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hze03041
]
124635032
03009 Ribosome biogenesis [BR:
hze03009
]
124635032
Enzymes [BR:
hze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124635032
Spliceosome [BR:
hze03041
]
Complex A
U1 snRNP components
U1 related factors
124635032
Complex B
124635032
Ribosome biogenesis [BR:
hze03009
]
Eukaryotic type
Pre-60S particles
Helicases
124635032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
124635032
NCBI-ProteinID:
XP_047026739
LinkDB
All DBs
Position
12:11865866..11873794
Genome browser
AA seq
664 aa
AA seq
DB search
MYDDRRGGRGGGRGGSRGGRGGGRGSSRGGRSSDRSLERGSSRFGSSRGGRDGGRGGRDG
GRGFGGRGGRDDFRGNFKNDQPGGNLRKIRWDTITLTPFQKNFYVPHQNVQSRSQAEIEA
YRSQNQITVKGRDVPAPSMYFEEGGFPDYAMKEILKQGFPHPTPIQAQGWPIALSGRDLV
GIAQTGSGKTLAYILPAIVHIINQPRLLRDEGPIVLVLAPTRELAQQIQQVANDFGQSVQ
VRNTCIFGGAPKGPQGRCLERGVEIVIATPGRLIDFLEKDTTNLRRCTYLVLDEADRMLD
MGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQNLAEEFLHDYIQINIGSLSLSANHNILQ
IVDVCEEWEKNDKLITLLTEISSEEETKTIIFAETKRRVDEITKAINRAGWRALAIHGDK
NQQDRDYVLNQFRMSSGGILVATDVAARGLDVEDVKFVINYDYPNNSEDYVHRIGRTGRS
HNTGTAYTLFTPNNSAKAKDLMNVLQEANQVVNPKLMELAQCGMGFKGKYGRNRYRDRDE
SGGGRFERGRGRGGRDARGGRDSRGGRGRFGGDRSSRWDDSNNDYDSNQSSYNTRSYNRD
SSRDNFRQDNGFRGRGRGRGADSQPFPSNYSFNQNQGFNVPPPTSYYNMYAQPPPPPANK
FAAK
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgatagacgtggaggacgcggcgggggccgtggtggcagccgcggaggccgt
ggaggcggcaggggtagttcacggggaggacggtctagtgatcgctccctagagagggga
agtagccgcttcggaagcagccgcggcggtcgagacgggggccgcgggggacgcgacggc
ggccgaggcttcggaggtcgcggtggccgcgatgacttccgaggcaatttcaagaatgac
caaccgggtggtaatcttaggaaaattcgctgggacacaatcactctcactccgttccag
aaaaacttctatgtaccgcatcagaacgtgcagtcgcgcagtcaagcggagatagaggcg
tatcgcagccaaaaccagatcactgtgaaagggcgcgatgttccagcgccgagcatgtac
tttgaagaaggaggttttcctgattatgctatgaaggagatattgaaacaaggcttccct
catcctactcccattcaagctcagggctggcctattgcactgtctgggagagatttagtg
ggaatagctcagacagggtcaggaaaaactctggcttatatactgccagcaattgtccac
atcatcaaccagccacgcctgctgagggatgaggggcccattgtactggttttggctcca
actagagagcttgctcaacagattcaacaggtggccaatgactttggtcagagcgtgcaa
gtccgcaacacttgtatattcggtggagccccgaagggaccacaaggcaggtgccttgag
cggggcgtagagattgtcatcgctactccaggacgacttattgatttcttggagaaagac
accacaaacctacgtcgctgcacatacttggtgctggatgaggcagaccgcatgttagac
atgggtttcgaaccacagatccgcaaaatcattgagcagattcgaccggacagacaggtt
cttatgtggtcagcaacctggcccaaagaagtgcagaatctagccgaggagttcctgcat
gattacatccagatcaacataggttctctcagcctgtctgcgaaccacaatatccttcag
attgtagacgtttgtgaggaatgggagaagaatgataagctgatcacactgctcactgag
atatcttcagaggaggaaactaagactatcatatttgctgagactaagagaagggtggat
gaaataaccaaagctatcaaccgtgcgggttggcgagccctcgccatccacggcgacaag
aaccaacaagacagagattatgtgctcaaccagttccgaatgtccagcggcgggatacta
gtcgcgaccgacgtcgctgcccgcggccttgatgtggaggacgtgaagtttgtgataaac
tatgactatccgaacaactctgaggactatgtgcatcgtatcggtcgcacgggccgctcg
cacaacaccggcacggcctacacgctcttcactcctaataattctgctaaggctaaagat
ctgatgaacgtactgcaagaggcgaatcaagtggtgaaccccaagctgatggagctggct
cagtgtggcatgggattcaagggaaagtacggtcgtaaccgctaccgcgaccgtgacgag
agcggcggcggtcgcttcgagcgcgggcgcgggcgcggcggccgcgacgctcgcggcggc
cgggactcgcgcgggggacgcggccgcttcgggggagaccggagctcaagatgggacgac
tcaaataacgactatgacagcaaccaaagctcatacaacacgcgttcatacaaccgagac
agcagccgcgacaacttccgacaggacaacgggttccgaggccgcggccggggacgcggc
gccgactcccagcccttccccagcaactacagcttcaaccagaaccagggcttcaacgtc
ccgcccccgaccagctactacaacatgtacgcccagcccccaccgcccccagccaacaaa
ttcgccgctaaatag
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