Helicoverpa zea (corn earworm): 124635088
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Entry
124635088 CDS
T08400
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
hze
Helicoverpa zea (corn earworm)
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hze01009
]
124635088
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hze03019
]
124635088
04131 Membrane trafficking [BR:
hze04131
]
124635088
03036 Chromosome and associated proteins [BR:
hze03036
]
124635088
Enzymes [BR:
hze01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
124635088
Protein phosphatases and associated proteins [BR:
hze01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124635088
Messenger RNA biogenesis [BR:
hze03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
124635088
Membrane trafficking [BR:
hze04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
124635088
Chromosome and associated proteins [BR:
hze03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
124635088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
124635088
NCBI-ProteinID:
XP_047026834
LinkDB
All DBs
Position
1:12872429..12887216
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AA seq
1129 aa
AA seq
DB search
MSTPPPTQARRSSGESKKVTPPASSIVTRNGARKAKIQTRAMSAGAKPSALVIAAKRKAQ
QKKKHGFDTELRDHYQIAMDSKSKVKGPTGLVTEPRMAEHRCLWDDQYPECPERLTSVIQ
RCHELNLIEQCKQYPPRAATKEELCALHSPSVYDMMETTHQNNDLKYLEELSAKYDAVYI
HPSTHELALLAAGSTIDLIDRIVSGELQNGAALVRPPGHHAMRAEPCGYCFYNNVALAAK
HAIDARGVNRILIVDWDVHHGQATQQMFYNDPRVVYFSIHRYEHGSFWPNLRQSNFHYVG
AGRGKGYNFNVPLNKTGMTDGDYLAIWHQLLLPMAFEYQPELIIISAGYDAAYGCPEGEM
ELTPAVYGHLTQALMSVCPRVGVVLEGGYCLTSLAEGAALTLRTLLGRAPPKLEQVPEPS
DEIRDTILNCIYAQKPHWNCYNFQPTYSTSGPPNVCDANRLKHTVTVKWEGDETRPDTFA
TRNCYPVQDSGTIKRIAERLNHLRLVTDLTIPQHAVGYIYDTAMLKHKNVCEPGHVECPE
RIMRIHERHRDFALLDRMRQLSARPATDDDILAVHTEGHLNRLKELATTKLRNLNIQKED
YDSVYFHPDSLESATVAAGCVLQMVDAVLSNEVGSGVCVIRPPGHHADDDIPSGFCLLNN
AAAAAKYAIHTHGLNRVLILDWDVHHGNGTQRITYDDNRILYMSIHRYDHGSFFPHSKDA
DHTAVGEGKGEGFNVNVPWNKRNMGDTEYLTAFTQVILPIAYAYNPQLVIVSAGFDACVG
DPLGGCKVTPECYGRMTQLLRGLAGGRVILCLEGGYNITSISYAMTMCSKALLGDPILHH
YDPKTPCHWAAIDSINDVINTHKQYWKCLKFQVALPSDNVLEPPLPSRGLVIESSELEVS
ACSEDLHNESTKSSASHLESSLEASMSNLNLNIEKKCSDGIHCGTDDEDEKPKPSKSSEP
SASASSSSPDSKKEQSNPIKPAQAGSSGGKKPTLVEYLAENMQSIVDGDMFAVIPQRWCP
HLDSLYTIPDDVKFEQGVKCIDCDHTEENWVCLHCYVTACARSINGHMQAHCATTGHALV
LSLVDLSVWCNICDAYVDNSLLYDAKNNAHRCKFGEDMPWCYKTDLHMQ
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccccaccgcctacacaagcgcgccgttcgtctggagagagtaagaaggtgaca
ccgcctgcatcaagcattgtgaccagaaatggtgctcgcaaggccaagattcagactcgt
gcaatgtctgccggggctaagccgtcagcgctagtgatcgctgctaaacgtaaagcccag
cagaagaagaagcacggttttgacactgaactgagagatcattatcaaattgccatggat
tctaaatcaaaagtgaagggtccaacaggtcttgtgacggagccgcgcatggcggaacat
cgatgtctgtgggatgatcagtatcctgagtgtcctgagcggttgaccagcgttatacaa
aggtgccatgaactaaacttaatcgagcaatgcaagcagtacccacctcgagcggcgact
aaggaggagctatgtgctctacactcgccgtccgtgtacgacatgatggagaccacacat
cagaacaacgaccttaaatacctggaggaactgtccgctaaatatgatgctgtttatata
catccgagtacccacgagctagccctcctagcagcaggctcaaccatcgacttaatagat
cgcatagtatcaggcgagctacagaacggcgcggcgctggtccggccgcccggacaccac
gccatgagggcggagccctgcggatactgcttctataataacgtggctttagctgctaaa
catgccatcgatgctagaggagttaataggatactaatagtggactgggatgtacaccat
ggacaggctacacaacaaatgttttacaatgaccccagagtagtatacttctcgatccac
cgctacgagcacggctcgttctggccgaacctgcgccagtccaacttccactacgtcggc
gccggccgagggaaggggtataactttaacgtgccgctgaacaagactggcatgacggac
ggcgattatctagctatatggcatcagctgttactgccgatggcttttgagtatcagccg
gagctcatcataatatcagccggctacgacgcggcctacggctgtcctgagggtgaaatg
gaactaacaccagcagtatacgggcacctaacacaagcactgatgtcagtatgtccgcga
gtgggcgtggtgctggagggcgggtactgcctgacgtctctggcggagggggcggcgcta
acgctgcggacgctgctaggccgcgccccgcccaagttggagcaagtgcctgagcctagt
gatgaaataagagacacaatactaaactgcatatacgcccaaaaaccacattggaactgc
tacaatttccaaccgacttactcaactagcgggccgcccaatgtctgcgatgccaacagg
ctgaaacatacggtcactgtcaagtgggaaggcgatgaaaccaggccggatacctttgcg
accagaaactgctatcccgtgcaggatagtggcacgataaagaggatagctgagcggttg
aaccatttgagattagtgacggatctcacaataccacagcacgcagtgggctatatttac
gacacagccatgctcaaacataagaacgtctgcgaacccggtcacgtagaatgtccggag
cgaatcatgcgcattcacgagcggcaccgcgacttcgctctgctggaccgcatgcggcag
ctgtccgcccggccggctaccgacgacgatatactcgctgtacatactgagggacatctc
aacaggctaaaagaactggccacgacgaaactaaggaatttaaacattcagaaggaagac
tacgactccgtgtatttccatccggactcgcttgaaagcgctacagtcgctgcaggctgc
gtcttacagatggtagacgccgtcctatcaaacgaagtaggcagtggagtctgcgtgatc
cgtccgcccggccaccacgccgacgacgacataccgtccggcttctgtctgctcaacaac
gcagccgccgccgctaagtacgccatacatactcacgggctcaacagagtgctcatactg
gactgggatgtacatcatggaaatgggacgcagaggattacttatgatgataatagaatt
ctctacatgtcgatccaccgctacgaccacggctcgttcttcccgcactcgaaggacgcc
gaccacaccgccgtcggagaggggaagggggaagggttcaatgtcaatgttccgtggaat
aagcgcaatatgggtgatacggagtacctgacggcgttcacgcaagtgatcctgcccatc
gcgtacgcgtacaacccgcagctcgtcatcgtgtccgctggcttcgacgcctgtgtggga
gacccgctgggaggttgcaaagtaactccggaatgctacggtagaatgacacaactgctc
cgaggtctagctgggggccgcgtcatcctctgcctcgaaggcggctacaacatcaccagc
atatcctacgccatgaccatgtgcagcaaagcgttactaggcgaccccatcctacaccac
tatgaccccaaaaccccctgccattgggcagccattgactccatcaacgacgtcatcaac
acacacaaacagtactggaagtgtctcaagttccaagtggctttaccctctgataatgtt
ctagaacccccgttaccttccagagggttagtcatagaatcaagtgaactagaagtgtcg
gcctgcagtgaggaccttcataatgaatcaactaagtccagtgcgagccatttggaatca
tcgcttgaggccagcatgagcaatttgaatttgaatatagaaaagaagtgttctgatggc
atccattgcggcacagacgatgaagacgaaaagcccaaaccttcaaaaagttccgaaccc
tctgcctccgctagtagcagttcaccagattcgaaaaaagaacaatcgaatcctataaag
ccagctcaagcggggtctagtggtgggaaaaagccgacgttagtcgagtatttggccgag
aatatgcaatcgatagtcgatggcgatatgtttgcggtgataccgcagcgctggtgtcct
catttagactccttgtatacaatacctgatgatgtgaagttcgagcaaggagttaaatgt
atcgattgcgatcatactgaagagaattgggtgtgtttgcattgttatgtgacagcctgc
gcccgcagcatcaacggtcacatgcaagcacactgcgccaccacgggccatgctctcgtc
ctctccctagtcgacctctcagtatggtgcaacatctgtgacgcttacgtggacaactcg
ctcctgtacgacgcgaagaacaacgcacacaggtgcaagttcggggaagacatgccctgg
tgttataagactgatttacatatgcaataa
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integrated database retrieval system
