Helicoverpa zea (corn earworm): 124635214
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Entry
124635214 CDS
T08400
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
hze
Helicoverpa zea (corn earworm)
Pathway
hze03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124635214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hze03041
]
124635214
03009 Ribosome biogenesis [BR:
hze03009
]
124635214
Enzymes [BR:
hze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124635214
Spliceosome [BR:
hze03041
]
Complex A
U1 snRNP components
U1 related factors
124635214
Complex B
124635214
Ribosome biogenesis [BR:
hze03009
]
Eukaryotic type
Pre-60S particles
Helicases
124635214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
PhoH
Motif
Other DBs
NCBI-GeneID:
124635214
NCBI-ProteinID:
XP_047026998
LinkDB
All DBs
Position
12:complement(6216188..6219529)
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AA seq
537 aa
AA seq
DB search
MALNILTKLLRRRCLRKLLSEGSQFSSELTSVNLLKTACIPYSTVNHEHILRQYRIKTLF
NYQYYSTKPAHQNEIDYYRNEHNITVIGEDIPSPYMEIEQSGFPDYIKSFLKEQGFSKPT
VIQSQGWPIAMSGQNFVGIAQTGTGKTLAYLLPAVVHIKEKKAKKGLGPIVLVLAPTREL
ARQIEEVAKDFEKSLNIRSVCVYGGASRSVQAEKLRKGVDILIATPGRLNDFIVSKTISL
SRSTYVVLDEADRMLDMGFEPQIRQALEGVPLERQILMFSATWPKEVRHLAKDYLGEFVQ
VNVGSTELSANHNIKQHVHICDAEDKMNLFKSLIHEISGDGFGKMLIFSNTKKFVDTLAL
TLRRNGWPADGIHGDKTQLQRDKIINKFKSGGTNILVATDVAARGLDVDGVTHVINYDFP
NTSEDYIHRIGRTGRQENKGVSHTILTDDDARQAKSLIDVLKEANQQVPQELEDLARSYD
ITKEKERQSKWNPRQNNYNKYSTNNYNKYNSNNYNKYNTNKKYNRFKNFKSSRYDDY
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggctttaaatattctaacgaaactactaagaaggaggtgtttacgtaaattgttatca
gaagggtcacaattttctagtgagctaacttcagtaaacttactgaagactgcctgtata
ccttattccactgtaaatcatgaacatatattacggcaatataggataaaaacactattc
aactatcagtattattcaactaaaccggctcaccaaaatgaaattgattattaccgtaat
gaacacaatatcacagttattggggaagacatacccagtccatacatggagatagaacaa
agtggtttccctgattacattaaatcttttctgaaagaacagggcttctcaaaacccaca
gtcatacagtcacaaggatggcctattgctatgagtgggcaaaactttgttgggatagca
caaactggtactggcaaaaccttagcttatttgctaccagctgtagttcacatcaaagag
aaaaaggcaaagaaaggattgggacccattgttctagttcttgcaccaactagagaactt
gctcgacaaattgaggaggtggcaaaggattttgaaaaatctctgaacatccgcagtgtc
tgtgtatatggaggggcaagccgttcagttcaagctgagaaactaaggaaaggagtggac
attcttatagctactccaggcaggctgaatgacttcattgtgagcaaaactatatcacta
agccgttccacatatgtggtattagatgaagcagacaggatgttagacatgggttttgaa
ccccaaattcgacaagctctagaaggtgtgccactagaaaggcaaattttgatgttttct
gcaacatggcctaaagaagtaagacacttagctaaggactatctcggggagtttgtacaa
gttaatgtgggatcaactgaactgtccgcaaaccataacattaaacagcatgttcatatt
tgtgatgcagaggacaagatgaacttgtttaagtctctaatacatgaaatatcaggtgat
ggatttggtaaaatgttaattttctctaatacaaagaagtttgtggatactttggcactg
accctgagaaggaatggctggccagcagatggcattcatggagataaaacacaattacaa
agagacaagattatcaataagtttaaatctggaggcactaatattttagttgctactgat
gttgctgctcgaggtcttgatgtggatggtgtgacacacgtgatcaactatgatttcccg
aatacttctgaagactacatccacaggattgggcgcaccggtcgtcaggaaaacaaagga
gtctcacataccattctcactgatgacgatgcaagacaagccaaaagccttattgacgtt
ctcaaagaagctaaccagcaagtaccacaagaattagaagacctggctcgttcctatgac
attacgaaagaaaaagaaaggcaatcaaaatggaatcccagacagaacaactacaataaa
tacagtacaaacaactacaataaatacaattcaaacaactacaacaaatacaataccaat
aaaaaatacaatagatttaaaaacttcaagagtagtagatacgatgattactaa
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