KEGG   Helicoverpa zea (corn earworm): 124635580
Entry
124635580         CDS       T08400                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
hze  Helicoverpa zea (corn earworm)
Pathway
hze03030  DNA replication
hze03410  Base excision repair
hze03420  Nucleotide excision repair
hze03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hze00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    124635580
   03410 Base excision repair
    124635580
   03420 Nucleotide excision repair
    124635580
   03430 Mismatch repair
    124635580
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hze03032]
    124635580
   03036 Chromosome and associated proteins [BR:hze03036]
    124635580
   03400 DNA repair and recombination proteins [BR:hze03400]
    124635580
DNA replication proteins [BR:hze03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    124635580
  DNA Replication Termination Factors
   ELG1-RFC complex
    124635580
Chromosome and associated proteins [BR:hze03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    124635580
DNA repair and recombination proteins [BR:hze03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     124635580
  Check point factors
   HRAD17(Rad24)-RFC complex
    124635580
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 AAA_16 AAA_14 nSTAND_NTPase5 AAA_lid_RFC1 MeaB Viral_helicase1 AAA_18 AAA_19 AAA_11 RuvB_N nSTAND3 Mg_chelatase RCF1-5-like_lid IstB_IS21 Rad17 MipZ AAA_assoc_2 AAA_5 NTPase_1 AAA_25 AAA_24 ABC_tran AAA_30 AAA_28 RNA_helicase CbiA AAA_3 AAA_23 MCM Castor_Poll_mid
Other DBs
NCBI-GeneID: 124635580
NCBI-ProteinID: XP_047027461
LinkDB
Position
13:complement(12765992..12770241)
AA seq 349 aa
MSDNDLSIMDVDEVAPKPLTSKAGTSGSKPSSNLPWIEKYRPIVFSDIVGNEDTVSRLAV
FARTGNAPNIIIAGPPGVGKTTTILCLARALLGAAFRDAVLELNASNDRGIDVVRNKIKM
FAQQKVTLPAGRHKLVILDEADSMTEGAQQALRRTMELYSHTTRFALAANNSEKIIEPIQ
SRCAVLRYSRLTDAQILAKVLEVCEKEQLSYTEEGVSAVVFTAQGDLRAALNNLQSTAQG
FAHVSAEHVFKVCDEPHPMLVRGMLEACLRQDIHAAYKVVAKLCKLGYAAEDIVSNMFRV
CKTLEAGEGARLALVREVGLTHLRVADGLGSPLQLAGLLARCCRAAADA
NT seq 1050 nt   +upstreamnt  +downstreamnt
atgagtgataacgacctttccattatggatgtggatgaggttgctccaaaaccgttaacg
tccaaagctggcactagcggctccaagccatcttctaatttaccatggatagaaaaatac
cggccgatagtattcagtgacatcgtgggcaacgaagacacggtctctaggctggctgtg
tttgcgcgcaccgggaacgctcctaacataataatcgcgggtcctccgggcgtcggcaag
accaccaccatcctgtgcctggcgcgcgcgctgctcggcgccgccttccgcgacgccgtg
ctcgagctcaacgcgtccaacgaccgcggcatcgatgtcgtgcgcaacaagatcaaaatg
tttgcacaacaaaaggtgacgctgccggcggggcggcacaagctggtgatcctggacgag
gcggacagcatgacggagggcgcgcagcaggcgctgcgccgcaccatggagctgtactcg
cacaccacgcgcttcgcgctcgccgccaacaactccgagaagatcatcgagcccatccag
tcgcgctgcgccgtgctgcgctactcgcgcctcaccgacgcgcagatcctggccaaggtg
ctggaggtgtgcgagaaggagcagctgtcgtacacggaggagggcgtgagcgcggtggtg
ttcacggcgcagggcgacctgcgcgccgcgctcaacaacctgcagtcgacggcgcagggc
ttcgcgcacgtgagcgccgagcacgtgttcaaggtgtgcgacgagccgcaccccatgctg
gtgcgcggcatgctggaggcgtgcctgcgccaggacatccacgcggcgtacaaggtggtg
gccaagctgtgcaagctgggctacgcggccgaggacatcgtgagcaacatgttccgcgtg
tgcaagacgctggaggcgggcgagggcgcgcggctggcgctggtgcgcgaggtggggctg
acgcacctgcgcgtggcggacgggctgggctcgccgctgcagctggcggggctgctggcg
cgctgctgccgcgccgccgccgacgcctag

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