Helicoverpa zea (corn earworm): 124636250
Help
Entry
124636250 CDS
T08400
Name
(RefSeq) vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
hze
Helicoverpa zea (corn earworm)
Pathway
hze04140
Autophagy - animal
hze04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124636250
04148 Efferocytosis
124636250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hze04131
]
124636250
Membrane trafficking [BR:
hze04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
124636250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
TPR_Vps41
Beta-prop_RIG_2nd
B129_C2H2-zf
Motif
Other DBs
NCBI-GeneID:
124636250
NCBI-ProteinID:
XP_047028195
LinkDB
All DBs
Position
14:6160379..6171408
Genome browser
AA seq
850 aa
AA seq
DB search
MHEAYEISHLLNAAVQIEAIAAYENNLLLGTRQGHVLMYSLSQTNGNQKYELQLLRYCKN
FSKKPIQQIEVIPEKNLLLCLTDSVLSIHNINGVNFPLVTTLDQTKGASLFALDNKPTTS
MTGEPNSVDRLCVAVRRKLQLYCGKNGEFKKHLFDFTIPDVPRVMAWGQQYVCVGFKAEY
VLYDLSSGNPEELFPTSSSKSLEPTIAKYSETSFLLGRDQTSVLVEEAKNIDIKKTVKWS
EAPIAVVWDEPYVLGLLSDQVIVQTVEPYLFIQTLPELNKARLMYRCKRGLIYVASVGQV
WCLSSVDVTKQRQQLLKDKHFQIAIELTSLSDCTPEEKEQKIHSIQVLYALELFDNKEYS
QSMKEFFKLKTDPADVIKLFPELDCKSEDKEKKKLTGKDLENALNALIMYLKELRANIGV
SPGPDEATNQRNVTQQLELIDTTLLKCYLQVNDALVAPLLRTNNCRLEEAERMLLQHGKH
SELIILYQTKGQHMKALQLLREQAKEPDSSLEGYQGTKNYLQQLGAEHINLIFKFSDWIL
KEHPEKGLKIFTEDKVEVENLPRPKILDFLLREHESLVIPYLEHVIHTWNDTNSLFHDAL
INMYREKITDKKANLIDAEVQHIKSKLIAFLEKSAHYTPERVVVHFPTDSLFEERAIIYG
KLGRHEQALAIYVLILGDVERAIRYCENISATPNDKNQDVYVILMRILMNPKQDNALSDN
PLANVPRHPKTAVPDLDTALNILEKHADKISPLKALSVLPDSVPLSRLKHFLESALDGQL
TLKRRMQVLKGLLYAEHMQVQELKQFHESKSVIINEYNVCPVCKKRFGNQSAFVRYPNGD
IVHFSCRVDK
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaagcatacgaaatatcccacttgctcaatgcagctgtacaaattgaagctata
gctgcttatgaaaataatttgctactgggtacaagacaaggccatgtattgatgtactca
ctgtctcaaacaaatgggaaccaaaaatatgagttgcaactcctccgatactgtaagaac
tttagtaagaaacctatacaacaaattgaagtaattcctgaaaaaaacttgctattatgc
ctaactgacagcgtcctctctatacacaatataaacggagttaatttcccattggttaca
acgttagatcaaactaaaggtgcttctctatttgcattagataacaagccaaccacatca
atgaccggggaacctaattcagtagatcgtctctgtgtggccgttagaagaaaactgcag
ttgtactgtggcaagaatggagaatttaaaaaacatctgtttgacttcaccatccctgat
gttccgagggtcatggcttggggccagcaatatgtgtgcgttggattcaaagctgaatat
gtgttgtatgatctctcatcgggaaatccagaagaattattcccaaccagcagttcaaaa
tctcttgagcccacaatagccaaatattccgaaacatcatttctacttggacgcgatcaa
acttcggtactggtggaggaggctaaaaatatagatataaagaaaacagttaaatggtct
gaagctcctattgcagttgtgtgggacgagccatatgtgttaggtttgttatcagaccaa
gtaattgtacagacagtggagccttacctcttcatccaaacattacctgaactgaacaaa
gcaagactgatgtatagatgtaagcgaggactgatatacgtggcttcagtgggtcaggtg
tggtgcctcagttccgttgacgtcacaaagcagaggcagcaactattgaaagacaaacat
ttccaaattgccatagagttaacgagcctctcagactgcacacccgaagagaaagaacaa
aagatacattccattcaagtactttacgcactcgagctatttgacaacaaggaatattca
cagtccatgaaagagttcttcaaattaaaaaccgaccctgctgacgtcatcaaactgttc
cccgaactagactgtaaaagtgaggacaaagagaaaaagaaattgaccgggaaagacctg
gaaaatgctctgaatgccttgataatgtacttgaaggagctgagggctaatataggagta
agtcctgggccggatgaggcgaccaatcagaggaatgtgacgcagcagttggagttgatt
gatactactttattgaagtgctacttacaggtaaacgatgctttagtagcaccacttctt
cgtaccaacaactgtcgtttagaagaagcagagaggatgttactacagcatgggaaacac
agcgaactaataatattgtaccaaacgaaagggcagcatatgaaagcgcttcagctgctt
agagaacaggctaaggaacctgattccagtttagaagggtatcaaggaacgaagaattat
ttacaacaacttggtgctgaacacataaacctaattttcaagttctccgactggatttta
aaagaacatccagagaaaggcttgaagatattcacagaagacaaagtagaagtagaaaac
ttaccccgtccaaagatattagattttcttcttagagaacacgaatctctggttatacca
tacttagaacacgtcattcatacttggaatgacacaaactcattgtttcacgacgcctta
attaatatgtacagagagaaaattacggataaaaaggcgaatttaatagatgcagaagtg
caacatataaagtcgaaattaatagcttttctagaaaagtctgcacattatactccggag
agagtggtggtacatttccctaccgacagcttgtttgaggaaagagctattatttacggt
aaattgggacgacatgagcaagcgttagctatatacgtactgatattaggcgacgtggaa
cgagcgatacgctactgcgagaacataagcgcgactccaaacgacaaaaaccaagatgtc
tacgtaattctgatgcgaattctgatgaacccgaaacaggacaatgctcttagcgataat
cccttagccaatgtgccgagacatccgaaaactgcggtaccggacttggatacagcgctg
aatatattggagaaacatgctgacaagatatcgcctttgaaggctctttcagtattgcct
gactcggtcccgctgagtcgcctcaaacatttcctggagagcgctttagacggacagctc
acgctaaagagacgcatgcaagttctcaaaggattgttgtatgctgaacatatgcaggtg
caagaactgaaacagttccacgagtcgaagagcgtaattataaacgaatacaacgtatgt
cctgtttgtaagaaacgtttcggcaaccagagcgctttcgtccgataccccaatggtgat
atcgtacattttagctgtagagttgataagtaa
DBGET
integrated database retrieval system