Helicoverpa zea (corn earworm): 124636260
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Entry
124636260 CDS
T08400
Name
(RefSeq) uncharacterized protein LOC124636260 isoform X1
KO
K27396
protein Smaug
Organism
hze
Helicoverpa zea (corn earworm)
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hze03019
]
124636260
Messenger RNA biogenesis [BR:
hze03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
124636260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
124636260
NCBI-ProteinID:
XP_047028215
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All DBs
Position
14:12479826..12488507
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AA seq
1172 aa
AA seq
DB search
MNGTFNEQLGGVAGVFEQWGACEQTVLACTLARRVPWPGLKLVQRAVEAALRSHVEDERL
ERDANDELLLAGLLTVRDDDDDGCERLHRLLGLLPLLRVDSQRCKELYVAAAPALVQRCV
DAPRRSAVVPELCRQLLCYLLVHPALTHHDQGILKQWLIYLENYIAGNRTENVWKPRIDP
CLMPDSNIWGTNSTFRRTIGKNVEFRGILDSVEHYSTDILQESFSKNGRDVDISIEGEKL
NFDATIAQPKSQRSNSLTPPSSNFMQMSSSAENLSDEPFVQKPRSFSLSSEHSLSQLRPI
SIMYGTTGSETRLDDLRSHNFGKHPGMSNVAQWLKSLRLHKYEWLFTNMSYEQMMTMDEK
CLEELGVTKGARHKLLLSIKKLSERGAALEGAEAELRAGLPARALQRLRHVLLSPMPPAS
DLPAAIVRALHLGTYSCVYVMCCSACATCCSAPCRPPPTCPPPSCGRCTWVRTAVCMSCA
AAPAPRAAQPHAARLRPARRHRAGAAPGYVQLCVCHVLQRLRHVLLSPMPPASDLPAAIV
RALHLGTYSCVYVMCCSACATCCSAPCRPPPTCPPPSCGRCTWVRTAVCMSCAAAPAPRA
AQPHAARLRPARRHRAGAAPGYVQLCVCHVLQRLRHVLLSPMPPASDLPAAIVRALHLGT
YSCVYVMCCSACATCCSAPCRPPPTCPPPSCGRCTWVRTAVCMSCAAAPAPRAAQPHAAR
LRPARRHRAGAAPGYVQLCVCHVLQRLRHVLLSPMPPASDLPAAIVRALHLGTYSCVYVM
CCSACATCCSAPCRPPPTCPPPSCGRCTWVRTAVCMSCAAAPAPRAAQPHAARLRPARRH
RAGAAPGYVQLCVCHVLQRLRHVLLSPMPPASDLPAAIVRALHLGTYSCVYVMCCSACAT
CCSAPCRPPPTCPPPSCGRCTWVRTAVCMSCAAAPAPRAAQPHAARLRPARRHRAGAAPG
VEVPEQRAGAAHARDVTALRRRPRAARRPHVSALLARREGAAPRGVHPARAAGDAEGLAA
PSAAATVLPPRVRHAAQQALSQEQQMARRTTARPQAPRPRVERGGRAARQVALLPAARAP
ARAAAARLLLARRAVPADDRAGHQLTAAARRSAPPLGGAAGDSHGAGHGRRRRTLGHIVM
LLLSKVYVRTISYEILSLSDWDRGGRDPDTSS
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcacgtttaacgagcagctcgggggcgtagccggggtgttcgagcaatgggga
gcctgcgagcagacggtgctggcgtgcacgctggcgcggcgcgtgccgtggccgggcctg
aagctggtgcagcgcgcggtggaggcggcgctgcgcagccacgtcgaggacgagaggctg
gagcgcgacgccaacgatgaactcctgctggccggcctgctcacagtgcgcgacgacgac
gatgacggctgcgagcgcctacatcgtctactaggccttctacctctgctgcgcgtggat
agccagcgctgcaaggagctgtacgtagcagctgcgccggcgctagtacaacgctgtgtt
gacgctccgcgccgcagcgccgtcgtacccgagctgtgtcgacagctgctgtgttactta
ctcgttcatcccgcgcttacgcatcacgaccaagggatattaaaacaatggctaatatac
ctagagaattatatagccggcaacagaacagaaaacgtatggaaaccaaggatagacccc
tgccttatgccagactcaaacatttggggcacaaacagtacattcagacggactatcggc
aagaacgtggagttccgaggcatactagactctgtagagcactacagtactgacatatta
caggaatcattctccaaaaacggccgcgatgtagatattagtatagaaggagagaaatta
aattttgatgcgacgatagctcagcctaagtcacagagatcgaatagtttgacgcctcct
tctagtaattttatgcagatgtcgtcttcggcggagaatttgagcgacgagccctttgta
cagaagcctcggagtttctctctgtcgagtgagcacagtttgagtcagttacggcctatc
agtataatgtacggtacgacgggtagtgagacgcggttggacgacttgcggtcgcacaac
ttcggcaagcacccgggcatgtccaacgtagcgcagtggctgaagagcctgcgcctgcac
aagtacgagtggctgttcaccaacatgagctacgaacagatgatgactatggacgagaag
tgcttggaggaattaggcgtgacgaagggcgcccgccacaagctgctgctgtcgatcaag
aagctgtcggagcgcggcgccgccctcgagggcgccgaggccgagctgcgcgccggcctg
cccgcccgcgccctgcagcgcctgcgccacgtgctgctcagccccatgccgcccgcctcc
gacctgcccgccgccatcgtgcgggcgctgcacctgggtacgtacagctgtgtgtatgtc
atgtgctgcagcgcctgcgccacgtgctgctcagccccatgccgcccgcctccgacctgc
ccgccgccatcgtgcgggcgctgcacctgggtacgtacagctgtgtgtatgtcatgtgct
gcagcgcctgcgccacgtgctgctcagccccatgccgcccgcctccgacctgcccgccgc
catcgtgcgggcgctgcacctgggtacgtacagctgtgtgtatgtcatgtgctgcagcgc
ctgcgccacgtgctgctcagccccatgccgcccgcctccgacctgcccgccgccatcgtg
cgggcgctgcacctgggtacgtacagctgtgtgtatgtcatgtgctgcagcgcctgcgcc
acgtgctgctcagccccatgccgcccgcctccgacctgcccgccgccatcgtgcgggcgc
tgcacctgggtacgtacagctgtgtgtatgtcatgtgctgcagcgcctgcgccacgtgct
gctcagccccatgccgcccgcctccgacctgcccgccgccatcgtgcgggcgctgcacct
gggtacgtacagctgtgtgtatgtcatgtgctgcagcgcctgcgccacgtgctgctcagc
cccatgccgcccgcctccgacctgcccgccgccatcgtgcgggcgctgcacctgggtacg
tacagctgtgtgtatgtcatgtgctgcagcgcctgcgccacgtgctgctcagccccatgc
cgcccgcctccgacctgcccgccgccatcgtgcgggcgctgcacctgggtacgtacagct
gtgtgtatgtcatgtgctgcagcgcctgcgccacgtgctgctcagccccatgccgcccgc
ctccgacctgcccgccgccatcgtgcgggcgctgcacctgggtacgtacagctgtgtgta
tgtcatgtgctgcagcgcctgcgccacgtgctgctcagccccatgccgcccgcctccgac
ctgcccgccgccatcgtgcgggcgctgcacctgggtacgtacagctgtgtgtatgtcatg
tgctgcagcgcctgcgccacgtgctgctcagccccatgccgcccgcctccgacctgcccg
ccgccatcgtgcgggcgctgcacctgggtacgtacagctgtgtgtatgtcatgtgctgca
gcgcctgcgccacgtgctgctcagccccatgccgcccgcctccgacctgcccgccgccat
cgtgcgggcgctgcacctgggtacgtacagctgtgtgtatgtcatgtgctgcagcgcctg
cgccacgtgctgctcagccccatgccgcccgcctccgacctgcccgccgccatcgtgcgg
gcgctgcacctgggtacgtacagctgtgtgtatgtcatgtgctgcagcgcctgcgccacg
tgctgctcagccccatgccgcccgcctccgacctgcccgccgccatcgtgcgggcgctgc
acctgggtacgtacagctgtgtgtatgtcatgtgctgcagcgcctgcgccacgtgctgct
cagccccatgccgcccgcctccgacctgcccgccgccatcgtgcgggcgctgcacctggc
gtcgaagtgcctgagcaacgcgccggcgccgcccatgcgcgtgacgtcacagctctgcga
cgacgaccacgagccgcccgtcgaccccatgtctctgcactgctggctcgtcgagaaggc
gctgcaccacgaggcgttcacccggcccgagctgcaggagacgctgaagggcttgcggca
ccgtctgccgccgcgacagttcttccaccacgtgtccgacatgccgctcaacaggcgctg
tcccaagaacagcagatggcgcgtaggacaaccgccaggccccaagccccgcggccgcgt
gtggagcggggcggccgggccgcgcggcaagtcgcactcctacccgccgcacgcgcgccc
gcccgcgccgccgccgcacgactactcctcgctcgacgcgctgtgcctgcagatgaccga
gcaggccatcaactgacggccgccgcccgacgctccgcgccgccactcggcggggcagcc
ggcgactcgcacggtgcgggtcacggacgccgcaggaggacactcggacacatagtaatg
ttactactgagtaaggtgtatgtacgcacgatttcttatgaaatccttagtttgtcggac
tgggaccgcggtgggcgggaccctgacacgagtagctag
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