Helicoverpa zea (corn earworm): 124637103
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Entry
124637103 CDS
T08400
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG5
KO
K11125
protein SMG5
Organism
hze
Helicoverpa zea (corn earworm)
Pathway
hze03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124637103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hze03019
]
124637103
03032 DNA replication proteins [BR:
hze03032
]
124637103
Messenger RNA biogenesis [BR:
hze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
124637103
mRNA cycle factors
Common to processing body (P body) and stress granule
124637103
DNA replication proteins [BR:
hze03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
124637103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
124637103
NCBI-ProteinID:
XP_047029394
LinkDB
All DBs
Position
15:complement(3368391..3378543)
Genome browser
AA seq
983 aa
AA seq
DB search
MKEGSNEILEAKVAERAERAKKLYRYVSDVARRVGDMTTTSRSISDLFSTQLEVQRQKLR
DNCEKLLFLDPINYGKKSLELLWRKVYYETVSAAKKLRETDNENDSYLFTHIVCGIGHFH
HFISRLESEMKLQIKELDYTSYHADGEYVDNNEAPTDEEVQFSRSALHSCLIYLGDLSRY
QVDIFHAFEPSIAARYYLQAAHVDMSSGMPYNQLGNLYNDKNYNLDSVCYYIHCLSCTTP
FEGAIGNLTKIFEKNAPYFDSINNPESLTQTEHIQSAITNFLSLIEIWYLSKNDTNIPQR
CSTIAHELKVAMDFIKSPLPDVDKSYNEFTQAVEEESSNPSCLNPNLVHKIVLICLFTIT
KVTETDEVKAFACKAFTLALLSQLLQKLLKQLESLGLKNPAFKYKSRSATLQIPNNNQFL
EADDTKQLFDEEPSNNTNDNDVNDTETVSKPAESAVVEENNKDVLSNGDDKSNIKKSLTK
RRRRRRQASSDSSDMSDVDTESSDIDESCSEEEDLSDSSEHSDDSVSEDSSYDVSDAEES
DVKSNGDVEKESKDVTKETTINGDLNDKKNNNENEFQHNSYNNNMLDVQGLQNFLLGDNY
LSSIKLLQDWALNEKDLILSCGDSGESLFQCVVDLLNILTYYFNPKHNENRECQILEYAR
SVAKKLKLEYKTIPLPEDVNLRGTNICKYDKDAAEWQMLDKYKLSFYEENIVRILNFVDF
GNQIAKIIPRIRYNRTLKIFYLKKNPPPKVTTKINHKRSKEWHNSKKPHVESSEGGLLRR
LGRLWLASQVRELERSGQLPVPALLALDTNALYKHLRRVKQLLRTRNFVLLIPTVVLQEL
DNLKREQSGARDAIRWLEVQLRSGSRFLRAQRPGQSKPLPLLKYPRKAPPHIHSFMQIME
FCNHFIAEEKQVQGGNGDPDSSLQGKSTPLLILLVGNEPGNEEDQYKEFSVTGAAHAAGI
SIEYIGDFYTKWRQTVHKNGKKR
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagggatctaatgaaattttggaggctaaagttgccgagcgcgctgaacgtgct
aaaaaactctatcgctatgtcagtgatgtagcaagacgtgtgggtgatatgacaacaaca
agtcggtccatatctgacttgttttccacccagcttgaagttcaacgacagaaacttagg
gacaactgtgaaaaacttttgtttcttgatcctatcaactatggcaaaaaatcacttgaa
ctactctggaggaaagtttactatgaaactgtatctgcagctaagaaactgagagaaacc
gacaatgaaaatgacagttacctgtttacacatattgtttgtggaattggccactttcac
catttcatatcaaggctggaatctgaaatgaagttgcagatcaaagaattggattataca
tcttaccacgcggatggtgaatatgttgataacaatgaagctccaactgatgaggaagtt
cagttcagtcgatcagccttgcattcatgcctgatttatcttggagacttgagtcgctat
caagtggatatatttcatgcctttgaaccatctatagcagctcgatattatctccaagct
gctcatgttgatatgtcttccgggatgccttataaccaattgggcaacctgtacaatgat
aaaaattacaacttggactcagtttgctactacatccactgtttaagttgtacaacacca
tttgaaggagctattggtaacttaacaaagatttttgagaaaaatgctccatattttgat
tcaattaacaatcctgaatcattgacacaaactgaacacatacagagtgcaataactaac
tttctctccttgatagaaatttggtatctgagtaagaatgacaccaatattccacaaaga
tgcagtaccattgctcatgagttgaaggtggcaatggatttcataaaatcaccattaccc
gatgtagataaaagttacaatgaattcacacaggctgttgaggaagaaagttccaatcca
tcctgtttaaatccaaatcttgtacataaaatagtacttatttgtttgttcactataaca
aaagtaacagaaactgacgaagtgaaagcttttgcttgcaaggccttcacattagcactt
ttgtcacaacttctacaaaaattgttaaaacagctggaatcccttggacttaagaaccca
gccttcaaatataaatcaagaagcgctacattgcagataccaaacaataatcaatttctt
gaagcagatgacacaaaacaactgtttgatgaagaaccatcaaataacacaaatgacaat
gatgttaacgatactgagactgtatcgaaacctgcagaaagtgctgtagtggaagaaaat
aataaagatgttttgagtaatggtgatgataaaagtaatattaagaagtcattgaccaag
cgtcgccgacgcagacgccaggcctcttctgatagctctgacatgagtgatgttgataca
gaaagtagtgacattgatgagtcttgctctgaggaagaagatttatcagattctagtgaa
cactctgatgactctgtaagtgaggattctagctatgatgtgtctgatgcagaagaatca
gatgttaaaagcaatggggatgtagaaaaagaaagcaaggatgtgactaaagaaaccacc
ataaatggtgacttgaatgataaaaaaaacaataatgaaaatgaatttcaacataacagt
tacaacaataatatgctagatgttcaagggttgcaaaattttttgcttggtgataattat
ctgtcaagcatcaaattactgcaggattgggcacttaatgaaaaagatttaatcctatct
tgtggagacagcggagagtcactttttcagtgtgttgttgatttgctcaatattttgaca
tactattttaatccaaagcataatgaaaacagagaatgccaaattctggaatatgctcgt
agtgttgcaaagaaattaaaacttgaatataaaacaataccattgcctgaagatgtaaat
ctacggggaacaaacatctgcaaatatgacaaagatgctgctgagtggcaaatgttagac
aaatacaaactgtcattttatgaggagaatatagtaagaatattgaattttgttgacttt
ggcaatcaaattgcgaaaataatacctagaattaggtacaacagaacattaaaaatattt
tacttgaaaaagaatcctcctcctaaagtgactacaaagatcaatcacaagagaagtaaa
gaatggcacaactctaagaaacctcatgttgaatcaagtgaaggagggttattgcgccgc
ctgggacgtctttggctggcgtctcaggttcgagagttagaacgcagtggacagttgccc
gtgcctgcactactggcgcttgacacgaacgccctctataagcacttgcgtcgggtcaaa
caactgcttcgaacccgaaactttgttcttcttattccaactgttgtgttacaagagttg
gataacctcaagcgtgaacaaagcggagctcgtgacgctattcgttggctggaagttcag
ttgcgaagcggctctcgattcttacgtgcgcaaaggcctggtcagtcgaaacctctgcca
cttctcaaataccctcgtaaagctccgccccatattcatagcttcatgcaaattatggaa
ttctgtaatcacttcatagccgaagagaaacaagtacagggaggaaatggtgacccagat
agctctttacaaggaaaatctacaccattactgatattgcttgttggcaatgaaccaggc
aatgaggaagaccagtataaagaatttagtgtaacaggagccgcgcacgctgctggcatc
tccatcgaatacatcggagacttttacaccaagtggcgccaaactgttcacaaaaatgga
aaaaagagatga
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