Helicoverpa zea (corn earworm): 124637350
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Entry
124637350 CDS
T08400
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
hze
Helicoverpa zea (corn earworm)
Pathway
hze03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124637350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hze03019
]
124637350
Messenger RNA biogenesis [BR:
hze03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124637350
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
124637350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
124637350
NCBI-ProteinID:
XP_047029679
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Position
16:complement(1232766..1254001)
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AA seq
658 aa
AA seq
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MAATRKLQGEIDRCLKKVTEGVETFDDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKSWIASGEIKDKSTLLEYRKLIETQMERFKVVERETKTKAYSKEGLGAAQKLDPAQKE
REEMSSWLVSSIDALNLQVDQFESEIESLLVGKKKRLDKEKQDRMEDLKLKLEKHRFHIK
KLETLLRMLDNMSVEVEQCSLVPQIKRIKEDVEYYIDSSQDPGFEENEYIYDDIRGLDDI
ELSGVGLPSSATTDSNNSNDSAGSPTSMLSGTSPVTSPTLEVHNHSTDSIDVEKKKKEEI
ITKVCDLSFSPTIHTNLPVKPLPLRAVNAGVSNSTCNVSSLLNNSAASTNSVGVAGGAAS
PPHARPSGPPPQHTNNSTEVVENGPVSTTPAHTATHLPPAPAQPPPTSKSSSVPLLGPGA
EPASPLTVNGPSQPQHHTPQHQPNNGRVSESSSTAGAAPGSGTASLKSMAQQAVQRAGLD
QHHPQSVRRGAMLAAAHIPPLLGVAPLGPLPLNSEHQLQFQMLESSFYHMPHPSDSERMR
VYLPRNICQTPLYYNQVLLPHSDSVEFFQRLSTETLFFVFYYMEGTKAQYLAAKALKKQS
WRFHTKYMMWFQRHEEPKVINEEYEQGTYIYFDYEKWGQRKKEGFTFEYKYLEDRDLN
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacaaggaaattacaaggtgaaatagacaggtgtttaaaaaaggttacggag
ggcgtggagacgttcgatgacatctggcagaaggtacacaatgcgacgaacagtaaccaa
aaggagaagtatgaggcagacctcaagaaggagatcaagaagcttcagaggctacgggat
cagatcaagtcgtggatcgcctccggggagattaaggataagagtacacttttagaatat
aggaaactaatagaaacacaaatggaaaggtttaaagtagtggaacgggagacgaagacg
aaggcgtattccaaggagggcctgggggcggcgcagaagctcgaccctgcgcagaaggag
cgcgaggagatgtcctcgtggctcgtctcctccatcgacgcacttaatttacaagttgat
caatttgagtctgaaatagagtcactgctagtgggtaagaagaaacgactggacaaagag
aaacaggaccgcatggaggatcttaaactcaagctggagaagcacaggttccacataaag
aagttagagaccctcctacggatgctggataacatgtccgttgaagttgaacagtgttcg
ctggtcccacagataaagaggataaaggaggacgtggagtactacatcgactcgtcacaa
gaccctggcttcgaggagaacgagtacatctacgacgacatccgggggctggacgacatc
gagctcagcggcgtcggcctgccctcctcagccaccaccgacagcaacaacagcaacgac
tccgcaggatctcctactagcatgctctcaggtacaagtccagtaacatcaccaacgtta
gaggtacacaatcactccacagactccatagacgtggaaaaaaagaaaaaagaagagatc
ataaccaaagtgtgcgatctgtctttttcaccgacgattcatacaaacttgccggtaaaa
cctctgccgctgcgcgcggtgaacgcgggcgtcagtaacagcacgtgtaacgttagttcc
ttgctcaataactccgcagcatccaccaatagcgtgggcgtggcgggcggcgccgccagc
ccgccgcacgcgcggcctagcgggccgccgccgcagcacaccaacaacagtaccgaagta
gtggagaatggtccggtgtcgacaacacccgcgcacacggccacgcatctaccgcctgcg
cccgcgcaaccaccgccaacgtcaaagagttcgtcggtgccgctgctggggccgggcgcg
gagccggcgtcgccgctcaccgtcaacgggcccagccagccgcagcaccacacgccacag
caccaacctaacaatggtcgagtaagcgagtcgtcgagtacggcgggcgcggcgccgggc
agcggcacggcgtcgctcaagagcatggcgcagcaggccgtgcagcgagccggcctcgac
cagcaccatccacagagcgtccgtcgcggcgcgatgctggcggcggcgcacatcccgccg
ctgctgggcgtggcgccgctcggcccgctgccgctcaactcggaacatcagctacaattc
caaatgttggagtcttcgttctaccacatgccccacccgtccgactcggagcgaatgagg
gtgtacctccccagaaatatatgccagacgcccttatattataaccaggtgctgctaccg
cactcagactcagtggagttcttccagcgtctgtcgacagagacgttattcttcgtgttc
tactacatggagggcacgaaggcgcagtacctcgccgccaaggcgctgaagaagcagagc
tggcgcttccacaccaagtacatgatgtggttccagaggcacgaggagcccaaggtcatt
aatgaggagtatgaacagggcacatatatctactttgactacgagaagtggggccagcgc
aagaaggagggcttcacgttcgagtataagtacttagaggaccgtgacttgaactga
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