Helicoverpa zea (corn earworm): 124637710
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Entry
124637710 CDS
T08400
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
hze
Helicoverpa zea (corn earworm)
Pathway
hze03030
DNA replication
hze03420
Nucleotide excision repair
hze03430
Mismatch repair
hze03440
Homologous recombination
hze03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124637710
03420 Nucleotide excision repair
124637710
03430 Mismatch repair
124637710
03440 Homologous recombination
124637710
03460 Fanconi anemia pathway
124637710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hze03000
]
124637710
03032 DNA replication proteins [BR:
hze03032
]
124637710
03400 DNA repair and recombination proteins [BR:
hze03400
]
124637710
Transcription factors [BR:
hze03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
124637710
DNA replication proteins [BR:
hze03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
124637710
DNA repair and recombination proteins [BR:
hze03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
124637710
MMR (mismatch excision repair)
124637710
DSBR (double strand breaks repair)
HR (homologous recombination)
124637710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
PAS_8
IBR
Motif
Other DBs
NCBI-GeneID:
124637710
NCBI-ProteinID:
XP_047030288
LinkDB
All DBs
Position
16:6940653..6945360
Genome browser
AA seq
603 aa
AA seq
DB search
MSHQLSEGSLEVIMNGGVYDKPIMQVLGSKKIQGSGANERFRLLVSDGKHSHSFAMLATQ
LNDKLISGELSDYSVVQIDRFVTSLLKNTGKGEKRVMIILDITIVAPGSTVGKKLGNPVT
WTEESAAAAPPAKSMPTPAPRPNPAPVPTSLPTPSANLDSSILSSQMTHPIASLSPYQNK
WVIKARVMSKSDIRTWNNARGEGKLFSMDLCDDSGEIRATAFKNECDKFYDMIQVDKVYY
ISRCQLKTANKQYTTMKNDYEMTFTANTVVAECMEDASSVPSIKFDFVPINDIAAKSVDT
LLDVVGVCKAASDLQELTARSTGKLLKKRELTLVDNSGGAVVLTMWGKEAENFDSNTNPV
IAVKSARLAEFNGSKSLSCLASTMIRLNPDLPEAHKLRGWYDNGGADMEIVNISARVGGY
SGGSNEWITFSDAEARQLGSGDKGDYFSLLGVLTFTFADNAVYKACPQEQCNKKLVDQEN
GLYRCEKCNREYPNYKYRLLLGANVSDATGDQRITAFNEAAEAMLGKNVAEIGRLFEYDK
TTYTQMFEEVKFRTFVFKFRTKMETYNDEARLKTLVVNVQPVDYKDANKRLIASIKALSG
VEV
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgagccaccaactatctgaggggtctcttgaggtgataatgaatggaggagtgtatgat
aagcccataatgcaagtgttgggcagtaagaagattcagggaagtggtgccaacgagagg
ttccggctcctcgtatctgatggcaagcattcacacagctttgccatgctggccacacaa
ctgaatgacaagctgatatctggggaactgtctgattactctgttgtacagattgatcga
tttgttacatcactgctgaaaaatactggcaaaggcgaaaagcgtgtgatgatcatcttg
gatatcacaatagtagctcctggcagcacagtggggaagaagcttggcaaccctgtgact
tggacagaggagtccgctgcagctgcaccaccagccaaatccatgcctacacctgcccct
cgtcccaacccagccccagttcccacgtcactgcctactccttcagcaaatcttgattcc
agtatactgtcttcacagatgacacatccaattgccagtctcagtccataccagaataag
tgggtgataaaagctcgcgttatgtctaaatcggacatacgcacgtggaacaacgcgcgc
ggtgaaggcaaactcttcagtatggacctgtgcgacgacagcggagagatcagggctaca
gcatttaagaacgaatgtgataagttctatgatatgatacaggtggacaaagtatactac
ataagtcgctgtcagctgaaaacagctaataaacaatacaccacaatgaaaaatgactat
gaaatgacattcacagctaacacagtagttgcagagtgtatggaagatgcttccagtgta
ccgagcatcaaatttgattttgtaccaattaatgatattgctgcaaaaagtgtggacacc
ttattggatgtggttggtgtatgcaaggcagcttcagatctccaagagttgactgctagg
agtacaggaaagttgcttaaaaagagggagcttacccttgtcgacaattcaggtggtgcg
gttgtcctaacaatgtggggcaaggaagctgaaaatttcgatagcaacacaaacccagtg
attgctgtaaaaagtgcccgtttggcggagtttaacggcagcaagtccctgtcttgcctg
gccagcactatgatcagactgaaccccgacttgcccgaagcacacaagctgagaggctgg
tacgataatggcggcgctgatatggagatcgtcaatatttccgccagggtcggaggctac
agtggaggcagtaacgaatggatcacattctctgacgcggaagctcggcagctcggctct
ggagacaaaggcgactacttcagtctactcggagttctcacatttacgttcgcggacaat
gcggtctacaaagcgtgtccacaagaacagtgcaacaagaaacttgtcgaccaagaaaat
ggactctacagatgcgagaagtgcaatagagaatatcctaattacaaatatagactttta
ttgggggcaaatgtatcagatgcaacaggagaccagcgtataacggctttcaatgaagcc
gcagaggcgatgctcggcaagaacgtcgcagaaatcggccgtctgtttgaatacgacaag
acaacatacacgcagatgtttgaagaagtcaagttcaggactttcgtgttcaagttccgc
actaaaatggagacttataatgatgaggcccgcctaaaaaccctagttgtcaacgttcag
ccagtagactataaggatgccaacaaaagactcattgccagcataaaagctctctcaggg
gttgaagtatag
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