Helicoverpa zea (corn earworm): 124637816
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Entry
124637816 CDS
T08400
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
hze
Helicoverpa zea (corn earworm)
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hze03021
]
124637816
03036 Chromosome and associated proteins [BR:
hze03036
]
124637816
Transcription machinery [BR:
hze03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
124637816
Chromosome and associated proteins [BR:
hze03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
124637816
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
HHH_3
SH2
Spt6_S1
HHH_9
Tex_N
S1_RRP5
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
124637816
NCBI-ProteinID:
XP_047030453
LinkDB
All DBs
Position
16:complement(3222208..3249843)
Genome browser
AA seq
1692 aa
AA seq
DB search
MADFLESEAEESEVDSEDEQPAERKKPKRKAAVQSDDEDEDEEDDEERLREELKDLIDDA
PIEESGSDGEDSDASAGPKKRKKSDDELDDRLEDEDYDLIEENLGVKVARNKFKRLRRLE
DDDSDNEGNDDPELEREVIAEKLFVGGSDDEDENRSESAAPRGEAEYDDENEDLESDADD
FIVDDDGRPIAERKKKRKPIFTDASLQEGQDIFGVDFDYDEFEKYGEEDYEDEEEEDLDE
YLEDEEEEGEKRRTKKGKAKRPSKKSIFEIYEPSELKRSHFTDLDNEIRKTDVPERMQTR
EVPITPVEEGSTELEDEAEWIYKQAFLKPPVSKPDAQEARERTRRGSSTITKIRQALDFM
RNQTLEVPFIAFYRKEYVQPELSINDLWKVYKYDAKWCQLKQRKENLLKLFENMRDFQLD
KVMENRDAPIPENMRLIKDEDIERLKNVQTPEELRDVHTHFLLYYSTDLPEMQKLQRTKE
KKKNLEEKKRLAREEADRNGEDPDEAAAAVEAAEPEDEEVTEVKYAVRSGPYELCRKAGI
EPLVKKFGLTPEQFAENVRDNYQRHEVEQQPVPPLEAAAEYTGSIGSAAEVVRRAVYMCG
VQLAREPLLRATLRDALRDRATLTVKPTPRGLKEIDENHACYGLKYMKKKPVRDLTGDQF
LKLTMAAEDKLLELSISEQIEGNTTISYLEELKQLYQKDEFAATVEAWNELRAEAVTIAL
TKIVMPELRRELHAVLLQESKEYILKCCRRRLYDWLKVAPYESRVSDDDDEEWSDSNGLR
VLSLAYVPDRQHSAFACVVGAGGELADHLRLPHLLCRRNAWDARERQNKEADMTALRRFI
MRKKPHVIVIGGESREAINVKADVSDCVQQLVEDEQFPRIPIEIADNHISKIYSNSIRGR
HDFREYPDILRQAICQARLLQDPLMEISQLCGPDEEILCLRYHSLQDQIPKEDLLEGIEL
EFVNRVNEVGVDVNEAVLTGRGTELLQFVCGLGPRKAQALIKLFKQTNQKLENRTQLVTV
CHMGPKVFINCSGFIKIDTSSLGDSTEAYIEVLDGSRVHPETYEWARKMAVDALEYEDED
ANPAGALEEILEAPERLKDLDLDAFAEELERQGFGNKSITLYDIREELNSRYKDLRVAYR
SPTAEELFDILTKETPETFYVGKMVLASVVGITHRKPQREMLDQANPVRNDETGLWECPF
CHKNDFPELSEVWNHFDAGACPGQATGVRIRLDNGLSGYIHIKNLSDRHVADPTERVRIG
QTVHCRILKIDVERFSVDCSSKSSDLLDKNNEWRPPKDPYYDQEAEDKDLRKEKEAKQTK
ERMQYVKRVIVHPAFHNISFAEAEKLMDKMAQGEVIVRPSSKGSDHLTVTWKVADGIYQH
IDVREEGKENAFSLGRSLWIQGSEFEDLDEIIARHVTPMAGLARDLIAYKYYKPLGGMRD
KAEEILKEEKARNPNKIHYVISAAKNYPGRFLLSYLPRARVTHEYVSVTPDGYKYRQRTF
DSLAGLLRWFKEHFREPPPAGTPAARTPAGRTPHMSAYHTPAGHTPAFHTPAHTPGPAYV
NTPYTPSAQTPYMTPFAATPRQPDFMPPPARVRQPAPYTEPADWQKAAEDWMRRNNREPS
STPRASGTPRASRTPRDGRDARDMREPREVRTPHAHSSGRSSRAHSLRSTPHTNTSPRSM
SLGDATPLYDEN
NT seq
5079 nt
NT seq
+upstream
nt +downstream
nt
atggctgattttctggagtcagaagcggaggaaagcgaggttgattctgaagatgaacag
ccagcggagcgcaagaagccaaagcgcaaggctgccgtgcaaagtgacgatgaggacgaa
gacgaagaagatgatgaagagcgcctcagggaggaattaaaagatttgatagacgacgca
cctatagaggaatctggcagtgacggggaggactcagacgctagcgcaggaccaaagaaa
agaaagaaaagtgatgatgaactagatgatagattggaagatgaggattatgacctcatt
gaggagaatcttggtgttaaagttgccagaaacaaattcaagcgtctgcgtagactggag
gatgatgatagtgacaatgaagggaatgatgaccctgagcttgagagagaggtcatcgct
gagaagctgtttgtgggaggatctgatgatgaagatgaaaaccgttcagaatcggcggcg
ccgcgtggtgaggctgaatatgatgatgagaatgaggacttggagtcagacgctgatgat
ttcattgtagatgatgatggtagacccattgctgagcgcaagaagaaacggaagcctata
tttactgatgcttccctccaagaaggtcaggatatattcggcgtagacttcgattacgat
gagtttgagaagtacggtgaggaggattacgaagacgaagaggaagaggacctggatgaa
tacctggaggatgaggaggaagagggtgaaaaacgcagaacaaagaagggcaaagccaaa
cggccgagcaagaagtctatcttcgagatatacgagcctagtgagctcaagagaagccac
ttcactgatctcgataatgagattcgcaaaaccgacgttccggagcgcatgcaaacgcgc
gaggtaccgatcacgccggtagaagagggcagcacggagctagaggatgaggccgagtgg
atatacaagcaggccttcttgaagccgcccgtgtctaaacccgatgcgcaagaggctagg
gagaggacgcgcaggggcagcagcacaataacgaagatccgtcaagcactagacttcatg
cggaaccaaacgctggaagtgcccttcatagcgttctaccgcaaggagtacgtgcagccc
gagctcagtatcaacgacctctggaaggtctacaagtatgatgctaagtggtgccaactg
aagcagcgcaaggagaatttgctcaagttgttcgagaacatgcgcgatttccaactggac
aaggtgatggagaaccgagacgcgcccatccctgagaacatgaggcttatcaaggatgag
gatattgaaagattgaagaatgtgcagactccagaagagcttcgtgatgtccacacacac
ttcctgctgtactactccacggatctgcccgagatgcagaagttgcagcgcaccaaggag
aagaagaagaatttagaggagaaaaaacgtctagctcgtgaagaagcggacaggaacggc
gaggaccccgacgaggcggccgccgcggtggaggcagccgagcctgaggacgaagaggtc
acggaggtcaagtacgcagtcaggtccggaccttacgagctctgcaggaaggctggcatt
gagcccctggtgaagaagttcggtctgactccggagcaatttgctgagaacgtgcgcgac
aactaccagcgacatgaagtggaacagcagcccgtgcccccgctcgaagccgctgccgaa
tataccggctcaatcggttcagcagcagaagtagtgcgtcgtgcagtatacatgtgcggc
gtacaactagctcgcgaaccgctgttacgcgccacgttgcgggacgcgttacgtgaccgt
gctacacttactgttaaacctacgcccagaggactgaaagaaattgacgagaatcacgcg
tgttatggtttgaaatacatgaagaagaagccggtacgtgatctcacaggcgaccagttc
ttgaaactaacgatggccgcggaagacaaactgttggaacttagcatcagtgaacagatt
gaaggaaacaccactatcagctatttggaggaactcaaacaactttatcagaaggacgag
ttcgcggccacggtggaagcgtggaacgagctgcgagccgaggccgtcaccatcgcgctc
accaagatcgtgatgcccgagctgcgccgggaactgcatgccgtgctgctgcaggagtcc
aaggagtatatactcaaatgttgtcgccgccgactttacgattggctgaaggtggcgccg
tatgagtccagggtatcagatgacgatgacgaagagtggtctgattctaatggtctccgc
gtactatccctcgcctacgtcccggaccggcagcacagcgcgttcgcgtgcgtggtgggc
gcgggcggcgagctggccgaccatctgcggctgccgcatctgctgtgccgacgcaacgcg
tgggacgccagggagaggcagaataaggaggctgatatgacggcgctgcgaagattcata
atgcgcaagaagccacacgtgatagtgatcggcggcgagtcccgggaggctatcaacgtg
aaagccgacgtgtctgactgcgtgcagcagctggtggaagacgagcagttccccaggata
cccatagagatcgctgacaaccatatcagcaagatttatagtaatagtattagaggacgg
cacgacttcagagaataccccgacatactccggcaagcgatctgccaagcgcgcttactg
caagatcctctcatggaaatatcacaactgtgcggtcccgacgaagaaatactctgtctc
agataccactccctgcaagaccaaatacctaaagaagatttactcgaaggcatagaactt
gaattcgtcaatagagttaacgaagtcggtgtagatgtcaacgaagcagtcttaactggc
cgaggaacggaattacttcaatttgtctgtggtctcggcccaagaaaagcacaagcacta
ataaaacttttcaaacaaactaaccaaaaactcgaaaatagaacgcaactcgtcacagta
tgccacatgggtccaaaagtcttcatcaactgctcaggtttcattaaaatagacacgagc
agtctcggtgatagtacagaagcttacatagaagttctggacggttcccgagtgcatccg
gaaacgtacgaatgggcccgaaagatggccgtcgatgccttagagtacgaagatgaggat
gccaatcctgccggagcgttagaagaaattctagaagcccctgaaagactgaaagactta
gatttggacgcttttgccgaagaattggagcgacaaggcttcggtaacaagagcataact
ttgtatgatatccgagaggaattaaactctaggtataaggaccttagggttgcatatcgc
tcgccgaccgctgaggaattattcgatattttgactaaagagactccagagactttctat
gtaggaaagatggtgttggcttcagtggttggtatcacacataggaagcctcagagagaa
atgctggaccaggccaatcctgtgaggaatgatgagactggattgtgggagtgcccgttc
tgccacaaaaatgacttccctgagctatctgaggtatggaatcacttcgacgccggcgca
tgtccgggccaggccacgggtgtccggattagactcgacaacggtttatccgggtacatt
cacataaagaacctttcggacagacatgtggccgaccccacggaacgcgtccggatcgga
cagacggtacattgtaggatattgaagatagatgtcgaaaggttctcagtggattgctct
tcgaaatcgtcagacttgttggataagaataatgagtggagaccaccgaaagacccctac
tacgaccaagaggccgaagacaaagatttacgcaaagagaaagaggcgaaacagactaaa
gagcgcatgcagtacgtgaagcgagtgatagtgcacccggctttccataatatatccttt
gctgaagccgagaaacttatggataagatggcgcagggagaggttattgttaggccgagt
agtaagggttcggatcacctgacggtaacgtggaaggtagcagacggtatttatcaacac
attgatgtcagggaagaagggaaagaaaatgctttttcattaggtcgaagtttatggatt
cagggttccgaattcgaagatctcgatgaaatcatagcgcgacacgtgacccccatggcg
gggctcgctcgtgacctcatcgcttacaaatactacaagcctttaggcggcatgcgtgac
aaagctgaagagatcctcaaagaagaaaaggcgcgcaacccgaacaagattcactacgtc
atctccgctgcgaagaactaccctggccgtttccttctgtcatatttacctcgagctcgc
gttacacatgagtatgtatccgttacgcctgacgggtataaatacaggcagcgtacattc
gactcgttagcaggtctactccgctggtttaaagaacatttccgcgagccgcctcctgct
ggtacccccgccgctcgcacccccgcaggccgcaccccgcatatgtctgcgtatcacacg
ccggccggccacacccccgccttccacacgcctgcacacacccccggccccgcctacgtc
aacacgccctacacgccgtccgctcagacgccatacatgacgccgttcgctgctacaccg
cgacagccagacttcatgccgccgcctgcaagagtccgacagcctgcgccttacactgag
cctgctgattggcagaaggctgccgaagactggatgcggcggaataaccgcgagccgtcg
agtacacctcgagcttcgggcactccccgcgcgtcccgcacgccgcgtgacggacgtgac
gcgcgagatatgcgtgagcctcgcgaagtgcgcacgccgcatgctcacagctcgggccgc
tcgtcccgcgctcactcgctgcgctcaacacctcacactaatacttcgcctcgctccatg
tctctgggtgacgccacgccgctctatgacgagaattaa
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