KEGG   Helicoverpa zea (corn earworm): 124639382
Entry
124639382         CDS       T08400                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
hze  Helicoverpa zea (corn earworm)
Pathway
hze03020  RNA polymerase
hze03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hze00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    124639382
  09124 Replication and repair
   03420 Nucleotide excision repair
    124639382
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hze03021]
    124639382
   03400 DNA repair and recombination proteins [BR:hze03400]
    124639382
Transcription machinery [BR:hze03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     124639382
DNA repair and recombination proteins [BR:hze03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      124639382
SSDB
Motif
Pfam: Zn_ribbon_TFIIS Zn_ribbon_RPB9 Zn_ribbon_recom Zn_Ribbon_TF RIM2a_ZnF Zn_ribbon_IS1595 DUF7351 HVO_0758 DZR zf-B_box_Trim66 DUF8106
Other DBs
NCBI-GeneID: 124639382
NCBI-ProteinID: XP_047032675
LinkDB
Position
2:complement(1554836..1555403)
AA seq 126 aa
MTLNLGRKDGGPGYVGIQFCQECNNMLYPREDKNNKVLLYACRNCDYKQLADSNCVYVNK
IMHEVDELTHINPDVVSDPTLPRTKDHMCPNCNHREAVFFQGQTRRAEEEMRLYYVCTSC
KHRWTE
NT seq 381 nt   +upstreamnt  +downstreamnt
atgacattaaatctaggaagaaaggatggcggcccaggctacgtcggtatacaattctgt
caagagtgcaacaacatgttgtatccgcgcgaagacaaaaacaacaaagtgctgctgtat
gcctgcaggaattgtgattacaagcaactggctgactcaaactgcgtgtacgtgaacaaa
attatgcacgaagtcgacgaattgactcatattaacccggatgtagttagtgatcctact
ctgcctcggacgaaggatcacatgtgccctaactgcaaccacagggaggcggtgttcttc
cagggccagaccagacgcgctgaagaggaaatgagactgtactacgtgtgcaccagttgt
aagcacaggtggactgagtga

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