Helicoverpa zea (corn earworm): 124639946
Help
Entry
124639946 CDS
T08400
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
hze
Helicoverpa zea (corn earworm)
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hze03041
]
124639946
Spliceosome [BR:
hze03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
124639946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
NRDE-2
Mononeg_mRNAcap
Motif
Other DBs
NCBI-GeneID:
124639946
NCBI-ProteinID:
XP_047033425
LinkDB
All DBs
Position
20:4801737..4811399
Genome browser
AA seq
979 aa
AA seq
DB search
MEDETSSDLQKCLSDGPMDTDEGPLINENSNGLSHLLTEGEFNSVEAAVDESSASNQGFL
NAVELSAGSVGDYLDNNTDGFNTDPFDVGDNAVTFPSDSLNNVLTDGDSLLSDTAFKAPS
ETDGDVTESQKATVDTDFEVSELSDAGYSLPADDMTQTKTDDSADNVAEVKAQATAEPDL
EQAEDSSSTPAIKTDQPNIEMDEQSVPVTEAPVEPIQEMEESEATSQPQVPEKNDEETKI
KEDNATPTKKSKMGGAEETEVVSEDELPEVQKPSIKDAENVSDDELPGPKPAELPADTEV
VSEDELPASKKETKESRKRKTEDERDGYDPGSPTSENESSNKKQAVAKNGESKPVPSEKR
SSIDEKPKKKLPELDKYWKVVNDDPTDFTGWTYLLQYVDQESDVEAAREAYDAFLSHYPY
CYGYWRKYADYEKRKGSKKKCLEVLERGLKAIPLSVDLWIHFLNHIKTTRTEDHAYIRSQ
YERAIEACGLEFRSDRLWESYIKWEAENGSALNVTNIYDRLLATPTLGYTSHFDNFQEHV
MSEPVAGVVSRAELVRLRGEVRDAAGAAPQLDLPPGEDEPLDHVASEEEAQAIKERIIAA
RRKVHKTTGEQVAARWTFEEGIKRPYFHVKPLERCQLKNWKSYLEWEKQHGSLKRALVLH
ERCLIACALYEEFWMRLIKFLEERIESNPELVAVEREVLERACSVHHLDKPELHLHWAHF
EEAHGNQAKAADILDRIEKTCPNLVQIQYRRVNLERRRGDYDKCVQLYEGYIAAAKSKAV
ASALAIKFARFLFHVRAQPAAARAALDAAVLRDPLNARLHAQRLDLALHTPGTPYEELDE
LVSSYGKQEGAEPEACAMLAWRRRELAEELGSAAAARDAHAHARALAKHLRKRARKDKHD
PPPPPTSTCADSNKKKECAAAPANSAASPGGGSYYQAPAATQSYEQPYAQPYQPAWGYQQ
APGPYQHHPHPWPQYPNYY
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgagacgagttcagatttgcagaagtgtttatccgatggaccgatggatacg
gacgaaggtcctcttattaatgagaactcaaatggattgtcgcatttgttgacggagggc
gagttcaacagtgtcgaggcggcggtggacgagtcgtcagcatcgaatcaaggtttcctc
aatgcggtggagctgtctgcgggtagcgttggcgactacctggacaacaacacagacggg
ttcaacacagacccattcgatgtgggcgataacgcggtcacatttcccagcgactcgctc
aataacgtgctcaccgacggcgactcgcttcttagtgacacagcgtttaaggctccctct
gaaactgatggtgatgttacagaaagtcagaaggcgacggtggatactgattttgaagtc
agtgagctgtctgatgctggctattcattgccagctgatgacatgacacaaacaaaaaca
gatgacagcgctgataatgttgctgaggtgaaggcgcaagcgacagcagagcctgactta
gaacaagctgaggactctagtagtactccagctatcaaaactgatcaaccaaacatagaa
atggatgagcagtctgtaccagtgacggaggcaccagttgagcccatacaggaaatggaa
gaatctgaggctacaagccaaccacaagttcctgaaaaaaatgatgaggaaactaaaatt
aaagaggataatgctacaccaactaaaaaatccaagatgggtggtgcagaagagacagaa
gttgtgtcagaagatgaattacctgaggttcagaagccaagtataaaggatgcggagaat
gtgtccgatgatgagctgccaggacccaagcctgctgagcttcctgctgacacagaggtt
gtatctgaagatgaattgccagcttctaagaaggagacgaaagagtcccgtaaacgtaag
actgaagatgagcgcgatggctatgatcctggatcacccacatctgagaatgaatcctct
aacaagaaacaggctgtggcaaagaatggagaaagcaagccagtgccttctgaaaagaga
tcttcaattgatgaaaaaccaaagaagaaattgcctgaacttgacaaatactggaaagtt
gtcaatgatgacccaactgattttactggatggacgtacttgctacaatacgttgatcaa
gagagcgacgtggaggcggctcgcgaagcgtacgacgcttttctgtcacactacccgtat
tgttacggctactggaggaaatacgctgactacgagaaacgtaaaggaagtaaaaagaag
tgcctcgaagtgttggaaagaggactcaaagccatcccactgtcggtggatctgtggata
cattttctaaatcatataaagacgacgaggactgaggaccatgcctacattcgctcgcaa
tatgagagggccatagaggcgtgtggtctagagttccgttccgatcgtctgtgggaatct
tacatcaagtgggaagctgagaacggatcggctcttaacgtcaccaatatttatgatcga
cttttggcaacacccacccttggatatacttcacatttcgacaatttccaagagcacgtg
atgtcggagccggtggcgggcgtggtgtctcgcgcggagctggtgcggctgcgcggggag
gtgcgggacgccgccggcgccgcgccgcagctcgacctgccgcccggggaggatgagccg
cttgatcatgtcgcatcggaggaagaggcacaagccatcaaagagcgcatcatagccgct
cgtcgcaaagtacacaaaactaccggagaacaagtcgcagccaggtggacgtttgaagaa
ggaatcaagcggccgtacttccacgtgaagcctttagagcggtgccagctgaagaactgg
aagtcatacctggaatgggagaagcagcacggctcgctcaagcgggcgctggtgctgcac
gagcgctgcctcatagcctgtgctctttatgaagagttctggatgaggctgattaaattc
ctagaagagcgcatagagagcaaccccgagcttgtagccgtcgagcgcgaggtgttagag
cgagcgtgctccgtgcatcacctcgacaagcccgagctgcacctgcactgggcgcacttc
gaggaggcacacggcaaccaggccaaggctgctgacatactcgaccgcatcgagaagacc
tgccctaatctagtgcagatacagtaccgccgcgtaaacttagaacgtcgtcgcggcgac
tacgacaaatgcgtgcaactatacgagggctacatcgcggccgccaagagcaaggcggtc
gcctcagctctggccatcaagttcgcgcgcttcctgttccacgtgcgcgcgcagcccgcc
gccgcccgcgccgcgctcgacgccgccgtgctgcgggacccgctcaacgcgaggctgcat
gctcagcgcctcgacctcgcgctgcatacgcccgggacgccttatgaggagctcgatgag
ctggtatcgtcatacggcaagcaggagggcgcggagcccgaggcatgcgcgatgctggcg
tggcggcgccgcgagctggcggaggagctgggcagcgcggccgccgctcgcgacgctcac
gcgcacgcgcgggcgctcgccaagcatctgcgcaagcgagcccgcaaggacaagcacgac
ccgccgccgccgcctactagcacatgcgccgactcaaacaagaagaaagagtgcgcagct
gctcccgccaacagcgcggcgtcaccaggtggcggcagctactaccaggcgccggcggcg
acgcagtcctacgagcagccgtacgcgcagccctaccagcccgcctggggctaccagcag
gcgcccggtccctaccagcaccacccgcacccctggccgcagtaccccaactactattag
DBGET
integrated database retrieval system
