Helicoverpa zea (corn earworm): 124640228
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Entry
124640228 CDS
T08400
Name
(RefSeq) probable cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
hze
Helicoverpa zea (corn earworm)
Pathway
hze03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124640228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hze03019
]
124640228
Messenger RNA biogenesis [BR:
hze03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
124640228
U7-dependent histone pre-mRNA processing factors
124640228
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
CpG_bind_C
Motif
Other DBs
NCBI-GeneID:
124640228
NCBI-ProteinID:
XP_047033861
LinkDB
All DBs
Position
20:complement(9354653..9368837)
Genome browser
AA seq
729 aa
AA seq
DB search
MTSIIKLHCLSGAGDETPPCYVLQIDEFKFLLDCGWDEKFDMDFIKELKRHINTIDAVLI
SHSDPIHLGALPYAVGKLGLNCPIYATLPVYKMGQMFMYDLYQAHRNVSEFDLFTLDDVD
AAFDRIVQLKYNQSIDMKGKGLGVRITPLPAGHSLGGTVWRIAAPGEEDIVYAPDFNHKK
ERHLNGCEIERLMRPSLMLLGAMNADYVQQRRRLRDEKLMTTILTTLRGGGCVLVCTDTA
GRVLELAHMLDQLWRNKDSGLVAYSLLLLSNVSYNVVEFAKSQIEWMSDKLTRAFEGARS
NPFALRHLQLCHSVGEVSRTPGPKVVLASFPDLESGFARDLFLLWAPNPQNSIVLTARTS
PGTLARDLIEKGGDRTIELEIRRRVRLEGAELAEFMQKQVKLNNTVKEETAGISSDSDSE
GELEMWVVTGAHDIPARAAQRAAGCFKHNKRHHAMYPFHDDRTRADDYGEIIRPEDYRLA
EIVDAEGEIRDVPPAPPTKQEPDEEMTEIPSKCVSSIRQVQIKANIQYIELEGRCDGESL
LRVVTQAKPRAIVGLRANTGALLTLKKHCEAEGIEKIYIPVAGDVIDATTESHIYQVKLT
DSLMSGLAWRSAGDTELAWLSAVVTPRAHQRENATSNEEASSDVALCLEAGGPARPHAAS
FINSVRLSELRAALARLGLGAEFSAGALECCNGTLAIRRLENGRVALEGVLSEEYYKVRE
LLYEQFAIV
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgacttctattatcaagctccactgtctttctggagctggtgatgaaactccaccatgt
tacgtgttacaaatagacgaattcaagttcctcctagactgtgggtgggacgagaagttc
gatatggactttatcaaggaacttaaaagacacataaacacaatagacgcagtactgata
tcccattcagacccaatccaccttggtgccttaccttatgcagtcggtaaactcggtctc
aactgtccaatatacgctaccctaccagtgtacaagatgggacaaatgttcatgtatgat
ttgtaccaggctcacaggaatgtgtcagagtttgatctgtttacgttggatgatgtagac
gctgcgttcgataggattgtgcaactgaagtataatcagagtattgatatgaaaggaaaa
ggtctaggtgtccgcatcactccattacccgctggccactctctaggaggtaccgtatgg
cgtatagcggcacctggtgaagaagacatagtatatgcccctgatttcaaccataagaag
gaacggcacttgaacggttgtgaaattgagaggttgatgagaccgtccctgatgctgctt
ggtgcaatgaatgctgattatgtgcagcaaagacggaggttgagggatgagaaattaatg
acaacaatcctaacgactctccgaggaggtggttgtgtactggtctgcacagacacagca
ggccgagtgctggaactagctcacatgttggaccagctatggcgcaacaaggactctggt
ttagtggcatactccctgctgctgctgtccaatgtcagctataatgttgtggagtttgct
aagtctcagatagaatggatgagtgacaaactgacccgcgcgttcgaaggcgccagaagc
aacccgttcgctctccgtcacctacaactgtgtcactctgtgggtgaggtcagcaggact
ccagggcctaaggtggtgcttgcatccttccctgatctggagtcagggtttgccagggac
ctgttcttgttgtgggctcctaacccacagaattctattgttttgactgctagaacatct
cccggcaccctagctcgtgatctcatagagaagggcggcgaccgtaccatcgagctggag
atcagacgaagagtgaggctagagggagctgaactagctgaattcatgcagaaacaggtc
aagctcaacaatactgttaaggaagaaacagccggcatatcgtcggactcggactcggag
ggagagctagagatgtgggtggtgaccggcgcgcacgacatccccgcgcgcgccgcccag
cgcgccgccggctgcttcaagcacaacaagcgccaccacgccatgtaccccttccacgac
gaccggaccagggctgacgactacggggagatcatacggcctgaagactatagacttgct
gaaatagtggatgcggaaggagaaatcagagatgtgccacccgccccgccaacgaaacaa
gagcccgacgaggagatgaccgaaatccccagcaagtgtgtatcctcgatacgccaggta
cagataaaggcgaacattcaatacatcgagctggagggccgctgcgacggcgagtcgctg
ctgcgcgtggtgacgcaggccaagccccgggctattgtcggcctgagagctaatactggg
gcgctgttgacgctcaaaaaacattgtgaggctgaaggaatagagaagatttacattccg
gtagccggagacgtgatcgatgcaacaaccgagtcgcacatctatcaagtgaaactaaca
gacagcttaatgtccggcctcgcatggcgctcggcaggcgacacggagctggcgtggctg
tcggctgtcgtcacgccacgagcgcatcagagagaaaacgctaccagtaacgaagaggca
agctccgacgtggctctgtgcctagaagcaggcgggccggcgcggccgcacgcggcgtcg
ttcatcaacagcgtgcggctgtcggagctgcgcgcggcgctggcgcggctggggctcggc
gccgagttcagcgccggggcgctcgagtgctgtaacgggacgctggctatacggaggttg
gagaacggccgcgtagcactggaaggagttttgtcggaagagtattacaaggtccgagag
ttactgtacgagcagttcgctatagtctga
DBGET
integrated database retrieval system
