Helicoverpa zea (corn earworm): 124640439
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Entry
124640439 CDS
T08400
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
hze
Helicoverpa zea (corn earworm)
Pathway
hze03030
DNA replication
hze03410
Base excision repair
hze03420
Nucleotide excision repair
hze03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124640439
03410 Base excision repair
124640439
03420 Nucleotide excision repair
124640439
03430 Mismatch repair
124640439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hze03032
]
124640439
03400 DNA repair and recombination proteins [BR:
hze03400
]
124640439
DNA replication proteins [BR:
hze03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
124640439
DNA repair and recombination proteins [BR:
hze03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
124640439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
PTCB-BRCT
AAA_22
AAA_30
AAA_14
AAA_5
AAA_17
AAA_16
RCF1-5-like_lid
NTPase_1
RNA_helicase
AAA_assoc_2
AAA_33
RuvB_N
AAA_18
AAA_19
BRCT_2
AAA_11
Motif
Other DBs
NCBI-GeneID:
124640439
NCBI-ProteinID:
XP_047034174
LinkDB
All DBs
Position
2:complement(11832245..11847699)
Genome browser
AA seq
1110 aa
AA seq
DB search
MSRDIRSFFSLKKPAKPAAVVEDDDDVIPESPDVQIIKNKKKDSKKKRVLNDSDEEIFTT
KKKKTTDEAQTSSKNKNKSPKPALKEVKAVDIFGSAPIKRTEPLVKKKKKTELGIHSDDE
FEKSLLEIDNAELEGKANNEKADDKSEKSTKTSNASKDRTEDSKKSTEKFDDKKHKSSSN
TDSNKDLKKTDESKPSKKTEDTKSLKKSESTEPKQNNDKDHTKVKKDHKSPKIDKFIQSN
LNQSSIDSNEGENTKSKIDKSKRKFAEFLETDTSQDHSSKKKKLNESMEAKLEETKEYDC
DSSVLDDEKGSHKKKKMNKSLNESVLTDEERHERRIHSAALYKNYLNRSGPKHLGAKEIP
EGKPDCLKDCAFLLTGVLDSFEKDEIAAAITKYGGCVKSGVSKKVTHVLAGEDAGPAKMA
KAQELGIKIINEDEFLAMITERSQGKPTSKPDIKKEIKKEKTPNKKDKSDKDRKDNHVDS
KSKKSPTDKVKMEPKSKDSNKLDVSKSKNREKSKSPRKIKEEKMELESETRSSASSSSSS
LVNGNVKREAAAIPANMSMWVEKYKPQNIKQIIGQHGDASNVKKLMNWLTKWYVNRKAKL
PKPSPWAKNDDGGYFKAALLSGPPGVGKTTTVSLVCKELGFDMVEFNASDTRNKTLIKEQ
IGELLTSTSLSAYAKGDTGKQAVTKKHVLVMDEVDGMAGNEDRGGLQELIALIKSSSVPI
ICMCNDRNSQKMRSLVNYCYDLRFSKPRVDQIKSAMLSICFKEGIKIPPDVLTQLIVSAN
QDVRQTLNLLSMWAVDPNRDDVDRLRKDAQTVRKDIKLGPWEAIRKVFSAEDHKKMSIND
KSDLFFYDYSLAPLFVQENYLQVEPHCPKHEVLQRISKAADSISLGDLVDARIRSKQAWS
LLPTQAMFSSVIPGHEMSGHLAAQIQFPGWLGKNSRATKLRRLCQEIHAHTRLSTSGSKS
SIFLDYSTHLRDAIVNPLIKDKADGISRSLEVLESYHLLREDLDSLVELSVWPGQRNPTI
LVDPKVKAAMTRTYNKKATALPYAPGAVKKGKAKADDEDIGDEEQEEEDEEDSDPENDAL
IKKKKSKDTEKPTTSKASSKAPTSRKKKEK
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagggatataaggtcatttttttcactgaagaagcctgcaaagcctgctgctgta
gttgaggatgatgatgatgttattccagaatctccagatgttcaaattattaaaaataaa
aaaaaggattccaaaaagaagcgtgttttaaatgattcagatgaagaaatctttacaacc
aagaagaagaaaaccacagatgaagcgcaaacttccagtaagaataaaaacaagtctccc
aagcctgcgctcaaggaggtcaaagctgttgacatatttggtagtgctccaatcaagaga
acagaaccattagttaagaaaaagaaaaaaactgaattaggaatccattctgatgatgaa
tttgaaaaaagtctcttagagatcgacaatgcagagttagagggtaaagcaaataatgaa
aaggctgatgataaatctgagaaatctactaaaacatcaaatgcctcaaaagatagaaca
gaagattcaaagaaatctactgaaaaatttgatgacaaaaaacataagtcgagttcaaat
acagattctaataaagacttgaaaaaaacagatgaaagtaaaccatcaaagaaaactgaa
gacaccaaatcattaaagaaatcagaaagtacagaaccaaagcaaaataatgataaagat
catacaaaggtaaagaaagatcacaaatcgccaaaaatagataagtttattcagtctaac
cttaatcagtcatcaattgattctaatgaaggtgaaaatacaaaatctaagattgataaa
agcaaaaggaaattcgctgagttcctagagactgatactagtcaagatcatagtagtaag
aagaagaaattaaacgagtctatggaggccaagttagaggagacgaaggagtatgattgt
gactcttcagtattggatgatgagaaggggagccataaaaaaaagaaaatgaataaaagt
ttgaatgagtctgtgctaacagatgaagagcgacatgaaaggagaatacattcggcagct
ctgtacaaaaactatctgaacagatctggacccaaacacttgggagctaaggagatccca
gagggtaaaccagattgcttgaaggactgcgcctttttattgactggagttctggactcg
tttgaaaaagacgaaatagctgctgcaattactaagtatggaggctgtgtcaaaagtggg
gtgtctaaaaaggtaactcatgtgctagccggcgaagacgcgggcccagcaaaaatggcg
aaagcacaagaactaggaattaaaatcattaacgaggatgagttcctagccatgatcaca
gaacggtcacagggcaagcctacctcaaaaccagatattaaaaaagaaatcaagaaagaa
aagactcccaacaaaaaagataaatctgacaaagatagaaaagataatcatgttgacagc
aaatctaagaagagtccgacagacaaagttaaaatggaaccaaaatcaaaggattcgaat
aaactagatgttagtaaatcaaagaatcgtgaaaagtctaaaagtcctagaaagataaag
gaagagaaaatggaactagaatcagaaactagatcaagtgctagttcatcttcttctagt
cttgttaatggtaatgtaaaaagggaagcagctgcaataccagcgaacatgagtatgtgg
gtagagaaatacaagccacagaatatcaagcaaatcatcggacagcatggtgatgctagc
aatgttaaaaaactaatgaactggctgacaaagtggtacgtgaacagaaaggctaagttg
cccaaacccagtccgtgggctaagaacgacgatggagggtacttcaaggcggccctactt
tctggacctccgggtgttggtaaaacgacaacagtatccctggtatgcaaggagttgggt
ttcgacatggtggagttcaatgcgtccgacacgaggaacaagacgctcatcaaggaacag
ataggggaactgctcacttctacctcattgtctgcttatgccaaaggtgatacaggaaag
caagcggtcacaaagaaacacgtgctggtcatggatgaggtggatggcatggcgggcaat
gaagacagaggtggtctccaagaactaatcgctctaataaaatcctcatcagtaccaata
atatgtatgtgcaacgacaggaacagccaaaaaatgaggtctctagtcaactactgctat
gatctcaggtttagcaagcctagggtcgaccagataaagtcagcaatgctttcaatatgc
ttcaaagaaggcattaagatacctccagacgtgttaacccagctgatcgtgtcagccaat
caggatgtcagacagacactcaacttgctgtccatgtgggcagtagaccccaaccgtgat
gacgtcgacaggctcaggaaagacgcgcaaactgttaggaaagatattaaactgggtcca
tgggaggcgatccgcaaggtgttctcagcagaagaccacaagaaaatgagcattaacgac
aagagcgatctgttcttctacgattatagtctagctcctctatttgtacaagagaattat
ttgcaagttgagccgcactgccctaagcatgaagttctccaaaggataagcaaggcagcg
gacagtataagcttgggcgatctggtagacgctaggatacgcagcaaacaagcctggagt
ctactgcctacgcaggctatgttcagctcagtgatcccaggccacgaaatgtcaggtcac
ctggcggcacagatccagttcccgggctggctcggcaagaactcccgcgccaccaagctg
cggcgcctctgtcaagagatacacgcgcatacacgactcagcacatcaggttcaaaatcg
tccatcttcctagactacagcacacatctccgcgacgctatagtaaacccgttgatcaaa
gacaaggctgacggtatcagccggtctctagaagtgctggagtcttatcatctgctgagg
gaagacctggactccttggtggagctgtctgtgtggccaggacagagaaatcctactatt
ttggtggaccctaaggtaaaagcggcaatgacgcgtacatacaacaagaaagcgacagct
ttaccgtacgcgccgggcgccgtcaagaagggcaaagctaaagcggatgatgaggatata
ggagatgaggaacaggaggaagaggatgaagaggacagtgaccctgagaacgatgctctt
attaagaaaaagaaaagcaaagacactgaaaagccgaccacaagcaaggcctcatccaag
gctccaacaagtagaaagaaaaaggagaaatag
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integrated database retrieval system
