Helicoverpa zea (corn earworm): 124640607
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Entry
124640607 CDS
T08400
Name
(RefSeq) CCR4-NOT transcription complex subunit 9
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
hze
Helicoverpa zea (corn earworm)
Pathway
hze03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124640607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hze03019
]
124640607
Messenger RNA biogenesis [BR:
hze03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
124640607
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
TPR_IPO11
ARM_PUB
Motif
Other DBs
NCBI-GeneID:
124640607
NCBI-ProteinID:
XP_047034402
LinkDB
All DBs
Position
21:4593650..4595479
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AA seq
300 aa
AA seq
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MINMSAQQSPANMQSVDREKIFTWILELCNPETRENALLELSKKRENVPDLAPMLWHSFG
TIAALLQEITNIYVAMIPPTLTAHQSNRVCNALALMQCVASHPETRSAFLQAHVPLFLYP
FLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVITFLLTTEIIPLCLRIMENGSELSKTV
ATFILQKILLDDSGLCYICQTYDRFSHVAMILGKMVLSLAKDPSARLLKHVVRCYLRLSD
NARAREALRQCLPDQLRDSTFAACLQEDNSTKHWLAQLIKNLEAQPPPASPAQQNMYKTR
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgattaacatgagtgcccagcagagcccggcgaacatgcagtccgtggacagagaaaaa
atatttacatggatcctggaactgtgcaatcctgagacccgagagaatgctttattggag
ctgagtaagaagcgtgagaatgtgccggacctggcgcctatgttgtggcacagcttcggc
acgatcgccgcgctgctgcaggagatcaccaacatctatgtggccatgatcccgccgacg
ctcacggcgcaccagagcaaccgcgtgtgcaacgcgctggcgctcatgcagtgcgtcgcc
tcgcatcccgagacccgttcggccttcctacaagcacacgtaccgctattcctttatccc
ttcctccacactgtttccaaaacacgtcctttcgaatacttacgccttaccagcctcgga
gttattggagccttagtcaaaacagatgaacaggaagttatcacttttctgttgaccact
gaaataataccactgtgtctgcgtatcatggaaaacggatctgaactatccaagacagtg
gctacatttattttacaaaagatattgctagatgacagtggactttgttatatttgccaa
acgtatgacagattctctcatgtagctatgatattaggaaaaatggtattatctctggcc
aaagacccgtccgcacgcttactgaaacatgttgtcagatgttatttgcgcctgtctgac
aacgctagagctagagaggccttaagacaatgcctgcccgaccagttgagagactccacg
tttgcagcttgcctccaggaagataactccactaagcactggctggctcagctcattaag
aacttggaagctcagcccccgccggccagtccggcacaacagaacatgtacaaaacaaga
tga
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