Helicoverpa zea (corn earworm): 124640627
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Entry
124640627 CDS
T08400
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
hze
Helicoverpa zea (corn earworm)
Pathway
hze03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124640627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hze03021
]
124640627
03036 Chromosome and associated proteins [BR:
hze03036
]
124640627
Transcription machinery [BR:
hze03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124640627
Chromosome and associated proteins [BR:
hze03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
124640627
PBAF complex
124640627
GBAF(ncBAF) complex
124640627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM
SWIRM-assoc_1
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
BRCT_2
SCHIP-1_C
Motif
Other DBs
NCBI-GeneID:
124640627
NCBI-ProteinID:
XP_047034440
LinkDB
All DBs
Position
21:complement(6734250..6761766)
Genome browser
AA seq
933 aa
AA seq
DB search
MATIGPKKDGGPNIEFFQSPESLAQFDQIRVWLQKNCKKHVQTDPPTKEGLAQLVIQLIQ
YQENKLGKNSSDPPFLRLPMKAFMDMKPGGSLCTVLATMFRFKSEQRWRKFDFQVGKNPS
RKDLNVQMMMEIESSLLGAEIIRSPAVFIRPDVDKATANKVKDIVVNHQGDICEDEEDAT
HIVYPTVDPLEEEYARPVFRRGNHVLVHWYYLPDSHDTWAQADLPVDVPETVSWECSRSE
PWRVSASWVLDLPQYNEWMNEEDYEVDANGKKKVHKLRLSVDDLIPGGEPSSKAKKGSKR
KRSPSPPPQKHAKRKSRITKRRENDVDEEEDNASRDNTDAAPTPENERSADTGAAGPGGA
GEAPGAGEAPATPAPPLDAHDDSQGKHSDSNTQEMLTKEELEDNVTDQTHHIVVPSYSAW
FDYNSIHTIEKRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTACRRNLAG
DVCAIMRVHGFLEQWGLINYQLEAESRPTAMGPPPTSHFHVLSDTPSGLQPLVTRPTQPR
PAENVPKVEPGLPNGAEAGAGATPPVPPIKPEPSLDLGSAPGLKLDQYRGGARGRAWTEQ
ETLLLLEALELHRDDWNRVAAHVGTRTQDECILHFLRLPIEEPYLHDPQAGGVLGPLAYQ
PIPFSKTGNPVMSTVAFLASVVDPRIASKATRAAMEEFAAIKDEVPAAMMEAHVKAAGAH
GPAAALAATGIAGTAPELSPTPEPKKEGSSDIKAEPMEVEEGEAKVKDEPAETPAAPEAE
KEPKEEPAATPAAEKPEGPATVDAKLQSAAAAALAAAAVKAKHLAGVEERKIKSLVALLV
ETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARHQAHQ
RLQAESGPAAVAAAAGAAAPPDAAPEPAPPAHA
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccataggcccaaagaaggatggagggcctaatatcgagttttttcagtcaccg
gaatcactagcacaatttgatcaaattcgcgtttggcttcaaaagaattgcaagaaacat
gtgcagacagatccccctacaaaagagggcttggctcaactggttatacagctcattcag
tatcaagaaaacaaattagggaagaactcttcagatccaccttttttgaggcttccgatg
aaagcattcatggacatgaagccaggcggttccctgtgcaccgtgctcgccaccatgttc
cgcttcaagtcggagcagcggtggcgcaagttcgacttccaggtcggtaagaacccgtcc
cgcaaagacctgaacgtgcagatgatgatggagatcgagtcctcgctgcttggagccgaa
atcattcggtcaccagctgtcttcattcgtccggatgtcgataaggcgaccgccaacaag
gttaaggacatcgttgtcaatcaccagggagatatttgcgaagacgaagaagacgcgaca
cacatcgtgtaccccacggtggacccgttggaggaggagtacgcgcggccagtgttccgg
cgcggcaaccacgtgctggtgcactggtactacctgcccgacagccacgacacctgggca
caggccgacctgcccgtggacgtcccagagacggtaagctgggagtgcagccgctcggag
ccgtggcgcgtgtcggcgtcctgggtgctggacctgccgcagtacaacgagtggatgaac
gaggaggactatgaagtcgacgctaatggcaagaagaaggtgcacaaactgcgtctgtca
gtggacgacctaatcccgggcggggagccgtccagcaaggccaagaagggcagcaagagg
aagcgctcgccctcgccgccgccgcagaaacatgccaagaggaagagccgtataacgaaa
cgacgggagaatgacgtggatgaagaagaggacaatgcgtccagagataacaccgatgcc
gcgcctacacctgagaacgaacgctctgccgatacgggcgcggcgggcccgggcggcgcg
ggcgaggcgccgggcgcgggcgaggcgccggccacgcccgcgccgccgctcgacgcgcac
gacgactcgcagggcaagcactcggactctaacacacaggaaatgctcactaaagaagag
ttagaagacaatgtgacagatcagacccaccatattgtggtaccatcatattccgcgtgg
ttcgactacaactccatacacactattgagaagagagcgctgcctgaattctttaacggc
aagaacaagtctaagacgccggagatttatctcgcttacaggaacttcatgatcgacacg
taccggctgaaccccacggagtacctgacgagcacggcgtgtcggcgcaacctggcgggc
gacgtgtgcgccatcatgcgcgtgcacggcttcctcgagcagtgggggctcatcaactac
cagctggaagcggagtcccgtccgacggcgatgggtccgccgcccacgtcgcacttccac
gtgctgtccgacacgccgtctggcctgcaaccgctcgtcacccggcccacgcaacccaga
ccagcggagaatgtgccaaaagtggagccaggtttacccaacggcgccgaagcgggtgcg
ggtgccacaccacctgtcccaccaatcaagccggagccttctctagatctcgggtcggcg
cctggattgaaacttgatcagtaccgcggcggcgcccgaggccgagcatggacggaacaa
gagaccctcctactcttggaggctttagagctgcaccgcgacgactggaaccgcgtggcg
gcacacgtgggcacgcggacacaggacgagtgcatcctgcacttcctgcgactgcccatc
gaggagccttatctacatgatccgcaagctggaggcgttctcggcccactagcatatcag
ccgataccgtttagcaagaccggcaaccccgtcatgagtacggtcgccttcctcgcgtca
gtggtggacccgcgcatcgcttccaaagctaccagagccgctatggaagaattcgctgct
attaaggacgaagtaccagcagcaatgatggaggctcatgtaaaagcggccggtgcccac
ggtccggccgcggcgctggccgccaccggcatcgccggcaccgcgccagagctctcgcct
acacctgaacccaagaaagagggttcatcagacatcaaggctgagcccatggaggtggag
gaaggagaggccaaggtgaaagacgagccggctgagacgcccgcagcgcctgaagctgag
aaggagccgaaagaggaaccggctgcgacgccagcagcagaaaaacccgaaggcccagcc
accgtagacgcgaagctccaatcggctgcggccgccgccctcgctgccgccgccgtcaag
gcgaagcacctcgccggcgtcgaggaacgcaagatcaagtcactcgtagctttactcgtg
gagacacagatgaagaaactcgagatcaagctcaggcacttcgaggagttggaagctact
atggagagggaacgagaaggactggaataccagcggcagcagctgattcaggagcgacaa
cagttccatctcgagcagctcaaggcagcagagttccgcgccaggcatcaggcacatcaa
aggttacaagcggagagtggtcccgcggcagtggcggcagccgccggcgccgccgcgccg
cccgacgccgcgcccgagcccgcgccgcccgcacacgcataa
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