Helicoverpa zea (corn earworm): 124640890
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Entry
124640890 CDS
T08400
Name
(RefSeq) regulator of gene activity isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
hze
Helicoverpa zea (corn earworm)
Pathway
hze03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124640890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hze03019
]
124640890
Messenger RNA biogenesis [BR:
hze03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124640890
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
124640890
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
124640890
NCBI-ProteinID:
XP_047034804
LinkDB
All DBs
Position
21:6792940..6798888
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AA seq
420 aa
AA seq
DB search
MANLNFQQAPRSLASGGVGGRVSSGLVGGVSGHVTPTFGGALSPGRNSTAMPGGAPPSMA
SRSTLFGQRAFADRRVPIPNALSQPNSNSMSSMGNLSRFNTSSNYHSVFGEGGDTSTPPL
LDLSEFPSLTARGAGDQAPAAAPPPPGSKPYVGMVKQPTSEQSEFTMSSEDFPALPGTSS
AGGTAPLPPPGPLPPPPDFSNHTNDKPRKGIQTSPDVISQGAHTEFYGKVTNIPETMIPN
QFGIVGLLTFIRAAESDPSLVSLALGQDLTALGLNLNSPDNLYLTFAGPWADTPCRPQDM
DYHVPPEYLINGSIREKLAPLRLNRYKEDLLFYLFYCFVGDVLQIAAAAELYNREWRYHM
EEKVWISQAPGMPMVEKTSTYERGTYYFFDAHNWRKVAKEFHLDYSKLEGRPQLPAHVLT
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacttgaatttccaacaagcacctagaagcctagcgagcggcggagtgggcggt
cgcgtgagctcggggctggtgggcggcgtgtcgggccatgtgacgcccacgttcggaggc
gcactgtcgcccggccggaactctaccgccatgcccgggggcgctccgccctctatggca
tcgcgatcaacactattcggccagcgggcttttgccgaccgcagggtacccataccaaac
gcgttatcgcagcctaactcaaattccatgtcgagtatgggcaacttgtcccgattcaac
acaagcagcaactaccactcggtgttcggagagggcggagacacgtcgacgcctcctcta
ctggacctcagcgagttcccctcgctgaccgcgcggggggcgggcgaccaggcaccagcc
gccgcgccaccgccgcccggctctaaaccttacgtgggtatggtgaagcagcctacatct
gagcagtcagagttcacgatgtcttcagaggacttcccggcgctgccgggcacgtcgagc
gcgggcggcacggcgccgctgccgccgcctggcccgctgccgccgccgcccgacttcagc
aaccacaccaacgacaagcctaggaagggcatacaaacctcacccgatgttatcagtcaa
ggagcacatacggaattctatggtaaagtaacgaatataccagagacgatgataccgaac
cagtttggtatcgtgggactgttgacgtttattcgcgcagcggaatcggaccccagttta
gtgtcgctggcgttagggcaggatctcactgcgctcggattgaatctaaattcaccagac
aacctttatctcacctttgctggcccttgggcggacacgccgtgcagaccacaagatatg
gactaccatgtgcctcccgaatatctaatcaatggttcaattagagaaaagttggcgcct
ctacgactgaatcgatataaggaagacctcttattttatttgttctattgtttcgtgggt
gacgtgctgcaaatagcagctgcagccgaactctacaaccgcgaatggcggtatcacatg
gaggagaaggtgtggatctcgcaggcgcccggcatgccgatggtggagaagacgtctacg
tacgagcgcggcacctattacttctttgatgcgcacaactggcgtaaggtggcgaaggaa
ttccacttggactacagcaagctggagggtcgaccgcaactgcccgctcacgtgctcacg
tag
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