KEGG   Helicoverpa zea (corn earworm): 124641565
Entry
124641565         CDS       T08400                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
hze  Helicoverpa zea (corn earworm)
Pathway
hze03030  DNA replication
hze03410  Base excision repair
hze03420  Nucleotide excision repair
hze03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hze00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    124641565
   03410 Base excision repair
    124641565
   03420 Nucleotide excision repair
    124641565
   03430 Mismatch repair
    124641565
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hze03032]
    124641565
   03036 Chromosome and associated proteins [BR:hze03036]
    124641565
   03400 DNA repair and recombination proteins [BR:hze03400]
    124641565
DNA replication proteins [BR:hze03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    124641565
  DNA Replication Termination Factors
   ELG1-RFC complex
    124641565
Chromosome and associated proteins [BR:hze03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    124641565
DNA repair and recombination proteins [BR:hze03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     124641565
  Check point factors
   HRAD17(Rad24)-RFC complex
    124641565
SSDB
Motif
Pfam: AAA Rep_fac_C DNA_pol3_delta2 RCF1-5-like_lid AAA_16 AAA_22 AAA_24 AAA_30 Mg_chelatase AAA_11 AAA_14 Gp44_lid RuvB_N bpMoxR Rad17 SLFN-g3_helicase AAA_3 Effector_1 AAA_19 DUF815 AAA_5 AAA_assoc_2 ATPase_2 AAA_7 ResIII DUF3373
Other DBs
NCBI-GeneID: 124641565
NCBI-ProteinID: XP_047035625
LinkDB
Position
2:9752916..9757827
AA seq 351 aa
MQAFLKTGKISASDKPSSSGVKTSGKKKPPAPWVEKYRPKTIDDIVDQGEVVQVLRECLS
GGDFPHLLFYGPPGTGKTSAILAAARQLFGDITRDRVLELNASDERGIQVIRDKVKSFAQ
LTVSSTRPDGRPCPPYKLVILDEADSMTNAAQAALRRTMERETRTTRFCLICNYVSRIIP
PITSRCSKFRFKPLARENVIKRLREICEAEGVDVGTGEVLHQAVDTCEGDLRRALTAMQC
CQRLLGKITAEGLVEVTGLVPEKLVDKYLSIKNYSELEQFVESFLMEAYSASQLLEQLSA
TVVTAGHLTNKQKCEISDKLAVCAHRLLDGGAELMQLTDLGCTIIMANNNS
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgcaagcatttcttaaaactggtaaaatctccgcatcggacaaaccttcgtcttctggt
gtaaaaacttctggaaagaagaagcctcctgcgccatgggttgagaaataccggccgaag
acgatagatgatattgtggatcagggagaagtggttcaagtgctgcgggagtgtttgtct
ggcggagattttcctcacttgttgttctacggtccgccgggtaccggcaagacgagtgcg
atcttagctgcggcgagacaactgttcggcgatatcactcgggatcgcgtgttggagctg
aacgcttcagacgaacgcggcattcaagtgatcagagacaaagtgaagtcctttgctcag
ctcactgtcagcagtacaagacctgatgggcgtccatgtccaccctacaagctggtgatc
ctggacgaggcagactccatgacaaatgctgcccaagcagctctcaggaggaccatggag
cgggagaccaggaccactcgcttctgtctcatctgcaactacgtgtcaaggattatacct
cccattactagcagatgttccaagttcaggttcaagcctctagccagggagaatgttata
aaaagactacgtgagatatgtgaagctgaaggtgtagacgttggcactggtgaagtgctg
caccaggcggtggacacatgcgagggtgacctgcgtcgcgcgctcaccgccatgcagtgc
tgccagaggctgctcggcaagattactgctgaaggacttgtggaggtaactggactggtt
cctgagaagctggtcgacaaatacctgagcatcaagaactacagtgagctggagcagttt
gttgaaagtttcctcatggaagcatactcagcctcccaacttctagaacagctaagcgcc
accgtagtgacggccggccatcttaccaataaacagaagtgtgagatcagtgacaagctc
gccgtctgcgcacatcgcctgttagacggaggggctgagctcatgcagctcacagacctc
ggctgtaccatcatcatggctaataataactcttag

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