Helicoverpa zea (corn earworm): 124641573
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Entry
124641573 CDS
T08400
Name
(RefSeq) protein CASC3-like isoform X1
KO
K14323
protein CASC3
Organism
hze
Helicoverpa zea (corn earworm)
Pathway
hze03013
Nucleocytoplasmic transport
hze03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124641573
03015 mRNA surveillance pathway
124641573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hze03019
]
124641573
Messenger RNA biogenesis [BR:
hze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
124641573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
124641573
NCBI-ProteinID:
XP_047035666
LinkDB
All DBs
Position
22:complement(2482245..2504512)
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AA seq
757 aa
AA seq
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MTSVARRREHEDSGEYSDASQEIEHNNSGNDGGQNESDYDSQGSDSEHSDQDSENKESER
RVDDDEDRSNPQYIPKRGTFYEHDDRTAASGEESTNTTSEAASEKKEGAEPPAERRRPPR
KSEIVNKWSHDKYNENEQMPKSRDELVAIYGYDIRNEDAPPHARRNRRYGRGPNKYTRTW
EDEEAYRRQSAAQQVPRKPPTAEDFPELDAGRRHGKPRSPRPRSKSQPSSTSPVENGALR
RNASIKTAKKPTVKQGTGRVAVKVPKPKEKVSMPPLENLTITATVNNNQGQAPRKVSAVA
QQRPVPTDQARKKTNANAQQPQSQSSQPANKSPPQQQSGQQQQQQKTQQNQQQPPTGGGG
SKRYSSLRQRPLADSYSPQQPQQQQQQQQPQQQQQQQQQPQQQQQQQQPSQQQQPHRYHA
GPNEFVGGNAQAHAHPQHIMHQQVMVSGANSHAASPPHAPPAHAPPAHAPPAHAPPAHAP
PAHAPPAHAPPAHALPAPPAAHAAHASQVRLGMMEQQSMPVPHHHNMHNMQAPHNMGQIQ
QAQGYAPPAMMPAQYMQQSNSGAVFGGAMYPAAPHGAPHAAPHGAPHPAPHAGPHGQAHP
TYQHQMYTPHHNYMGVPPTGGVTYYNCAEQEPPAPQPRPQRRPTAAIPIVSPHHADRPAN
SSEKDNIDRIVENMFVRKPWPATHGADSKEKQPDNRSSQEPQSKESSQPNSLTSSSISTD
SKPSESREEPQKQTEVKEEIREPVESAVTQESIATDA
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccgtggctaggagacgggagcacgaagattccggagaatattcggacgcatcg
caagagatcgagcacaataactccgggaacgatggtggccagaacgagtcggattacgac
tcccaggggagtgactctgaacactcggatcaagattccgaaaacaaggagtcggaacgt
cgagtagacgatgatgaggatcggagcaatccccagtacatccccaaaagggggaccttt
tatgaacacgatgacagaactgcggccagtggagaagaatcaaccaacacaacttcagag
gcggcctcagagaagaaggaaggcgccgagccgccggccgagcgccgccgcccgccccgc
aagtctgagatcgttaacaagtggtcgcatgacaagtataatgagaacgaacagatgccg
aagtcccgtgacgagctagttgctatctacgggtatgacataaggaatgaggacgcacct
ccccacgccaggcgcaaccgacgatatggtcgcggtcccaacaagtacactcgtacatgg
gaagacgaggaggcgtacagaagacagtcggcagctcagcaggtgccgaggaaaccaccc
acggctgaggacttccctgaacttgacgctggaaggagacatggcaaaccccgctcccct
cgaccccgttcaaagtcccaaccatcttccacttcccccgtagagaacggagctctccgt
cgcaacgcttccatcaaaacggccaagaagccgaccgtcaagcagggaacgggccgcgtg
gccgtcaaggtgcccaaacccaaggagaaggtgtccatgccgccgctggagaacttgact
ataaccgccactgttaataacaatcaaggtcaggccccgcgcaaggtgagcgcggtggcg
cagcagcggccggtgcccactgatcaggcacggaagaagaccaatgctaatgcacagcag
ccacaatcacaatcgagccagcccgcgaacaagtctccgccgcagcaacaatccggtcag
caacaacagcaacagaagacgcaacagaatcagcaacagccgccaaccggtggaggtggc
agcaaacgttacagcagcttacgccagcggccacttgctgattcctattctccgcaacaa
ccacagcaacagcaacaacaacaacaaccacagcaacaacaacaacagcagcaacagcca
cagcaacagcagcaacaacaacagccctcccagcaacagcagccgcatagatatcatgct
ggtccgaacgagttcgtgggtggcaacgctcaggcccatgctcatccacaacacatcatg
caccagcaagtaatggtgagcggcgccaacagccacgcggcgtcgcccccgcacgcgccg
cccgcgcacgcgccgcccgcgcacgcgccgcccgcgcacgcgccgcccgcgcacgcgccg
cccgcgcacgcgccgcccgcgcacgcgccgcccgcgcacgcgctgcccgcgccgcccgcc
gcgcacgccgcgcacgcctcacaggtgcggctaggcatgatggagcagcagtcgatgccg
gtgccgcatcatcacaacatgcataacatgcaagcgccacacaatatgggtcaaattcag
caagcacagggttacgcaccgcccgccatgatgccagcgcagtatatgcagcaaagcaac
agtggcgcagtattcggtggggcgatgtaccccgccgccccgcacggcgccccgcatgcg
gccccgcacggcgccccgcaccccgccccgcacgcgggtccgcacgggcaggctcatccc
acgtaccagcatcagatgtatacgccgcatcataattatatgggcgtcccccccacgggc
ggcgtgacgtactacaactgcgcggagcaggagccgcccgcgccgcagccgcggccgcag
cgccgtcccaccgccgccatacccatcgtcagcccgcaccatgccgacaggccagcaaat
tcgtctgaaaaggacaacatagacaggatcgtggaaaacatgttcgttcggaaaccctgg
cctgcgacacatggggctgattcaaaagaaaaacagccagacaaccgtagttcacaagaa
ccacaaagcaaagagtcttcccagcccaacagcttaacttccagttccatctccaccgac
tccaagccttctgagagcagagaagagccccagaagcaaacagaagttaaagaagagatt
agggagcccgtagaatccgcagttactcaggaaagtatagctacggatgcctga
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