Helicoverpa zea (corn earworm): 124641929
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Entry
124641929 CDS
T08400
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
hze
Helicoverpa zea (corn earworm)
Pathway
hze03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124641929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hze03021
]
124641929
Enzymes [BR:
hze01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
124641929
Transcription machinery [BR:
hze03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
124641929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
Motif
Other DBs
NCBI-GeneID:
124641929
NCBI-ProteinID:
XP_047036146
LinkDB
All DBs
Position
23:1944183..1958182
Genome browser
AA seq
1129 aa
AA seq
DB search
MNQKKIAKNPSLAYTSNPDYRKPPKIANPYLQCLGAPHIDSFNYMLGDGLQAAIADLVPA
EFESPTGERVKITIDEAGFAKPSVPMEAVGVKNQTVLPTECRQRAATYKGDFKIRMTVTI
DEKNITVDRSLGSLPIMVKSKMCHLADLSPEELVEHNEHADEWGGYFIVKGHERLARMLL
VTRRNYPVAIKRSGWRMRGNLFSDYGVMVRCVTSDQTSTNNVLHFLNNGTCKLMFSYRKM
MYYAPLLLIMKCLVDWPDHYIYRLLLHGKKNDLYYVNCIQNMLRELHEEGLHSSHECLSY
LGRMFRPKLYDLPPWASDLDAAHFLINRCVLIHLKEHKDKFNALVFMAQKLYDLVQNKCK
VEGADAVMVQELLVGGHLYLQILKERLQQLITNVRIQIIKKAKTSKKLVIGTHELQQMLR
SSGNLEQKMETFLATGNAPSNNVTLAQYKGLTIVAENINRMRYMSHFKSIHRGSFFMEMR
TTEARQLLPDAWGFVCPVHTPDGAPCGLLNHLTCTAQVTQPADPKQVAALPQVLERCGME
PISSVSQTPLSRDVYKYPVFVDGKLVGYFAEDTVDKSAAYLRTLKIKGEEVPITTEIVVV
PKKQICSQYAGVFLMTSECRLMRPVINSSSQQLELIGTMEQLYLDIAVTHNEIIKGKTTH
VELSQTAFMSNLAQLVPMPDCNQSPRNMYQCQMGKQTMGTPIHTWLTNAETKLYRLQTPA
TPLFRPTHYDNIGLDDYPCGTNAIVAVISYTGYDMEDAMIINKSSYERGFAAGSVYKADF
IELAHPASYFCRDPSKPDLGKHIDDDGLPAVGARVKPEDPFYSFYDGEKSTFVVSRYHGK
EEVFVDSVRLCGDFSARPLKKACVMLRLQRNPTVGDKFASRAGQKGICSQKWACEDLPFT
ESGLVPDVLFNPHGFPSRMTIAMMIECMAGKAASLHGHVHDATPFRFNEKDTAINYFGRL
LEASGYNYYGTERMYSGVDGREMDADIFFGVIHYQRLRHMVSDKWQVRTTGAVDALTRQP
VKGRRRGGGVRLGEMERDALVSHGAAFLLHDRLFHCSDKTEAILCSKCGTLLGPIVGRSE
TSKETCRLCGEGNLVSIAIPYIFKFFVTQLACVNINVKINCSEQLALTA
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaaagaaaatagccaagaatccttccttagcttatacaagcaatccggactac
cggaagccgcctaaaatcgcaaacccctatctacaatgccttggagcacctcatatagac
tctttcaactatatgttgggcgatggtttgcaagctgcaatcgcggaccttgttccagcc
gagtttgagtctcctaccggagaaagggttaaaataactatagatgaggctgggttcgct
aaacccagtgttcctatggaggctgtgggtgttaagaaccagacggtactgcctacagag
tgccgacaaagagctgctacttacaaaggggactttaagatacgaatgacagttacgatt
gatgagaaaaatattacagtggataggtcacttggatctttgcctatcatggttaagtcg
aaaatgtgccacttagcagacctctctcctgaagaattggtggaacacaatgaacacgct
gacgagtggggtggatatttcattgttaagggtcatgagcgactagctcgcatgcttcta
gtgacgagacggaactatccggttgccatcaagcggtcagggtggaggatgagagggaac
ctgttctccgactacggtgtcatggtccgatgtgttacttccgatcagacaagtacaaac
aacgtccttcacttcctaaacaacggtacgtgcaagttaatgttctcgtaccgcaagatg
atgtattacgctccactactgctcatcatgaagtgtctggtggactggcccgaccactac
atctacaggctgctgctgcacgggaagaagaatgatctgtattatgtcaattgcatccaa
aacatgctccgagagctccacgaagaaggtctgcactcctcacacgagtgtctctcatac
ctagggcggatgttcaggcccaagctctacgacctgccgccctgggcctcagacctggat
gcagcccacttcctcatcaaccgctgtgtgttgatacacttgaaggaacacaaggataag
ttcaatgccctcgtcttcatggctcagaaactatatgatttggtgcagaataagtgtaag
gtagaaggtgctgacgcagtgatggtccaagagctcctagtcggtggacatctatacctt
cagatcctgaaggaacgtcttcagcagctgatcaccaatgtcaggatacagatcatcaag
aaagctaagactagcaagaaacttgtcatcggaacgcacgagctacaacaaatgctccgc
agttcaggcaacttggagcagaagatggaaaccttcctggcgaccggcaacgctccctcc
aacaacgtgacactcgcacagtacaagggactcactattgtagctgagaatattaatcgg
atgcgctatatgtctcatttcaagtctatccaccgagggtcgttcttcatggagatgcgt
accacagaggctcggcagctgctgcccgacgcgtggggcttcgtgtgccccgtgcacacc
cccgacggagcaccctgcggcctgctcaaccatctcacctgcactgcacaggtaacacaa
cccgccgacccgaagcaagtagcagccttaccacaagttttagagagatgcggtatggaa
ccgatcagttcggtatctcaaacccccctctcccgtgacgtgtacaagtacccagtgttc
gtcgacggcaagctggtgggctacttcgccgaggatacggtggacaagtcagctgcctac
ctccgaaccctcaagattaagggggaggaggtgcctattactacggagatcgtggttgtg
ccgaagaagcagatatgctcccaatacgcgggcgtattcctgatgacgagcgagtgtcgt
ctcatgcggcccgtcatcaacagcagcagtcagcagctcgagctgatcggcaccatggaa
caactgtacctcgacatcgccgtcacacacaatgagatcattaaaggtaaaacgactcac
gtggaattatcgcagacggctttcatgagcaacttggcacaactcgtacccatgccggat
tgtaaccagtcgccacgtaacatgtaccaatgccagatgggtaaacaaacaatgggtaca
cctattcacacgtggttaacgaatgcggagaccaaactgtacagactgcagaccccggcc
acgcctctgtttagaccgacacattacgataatatagggctggatgactatccttgtggg
accaatgctattgttgctgttatttcttatacgggctacgacatggaagacgctatgata
ataaacaaatcttcatacgagcgaggttttgccgccggctctgtttacaaagcagacttt
atagaactagctcatcctgcttcttacttctgccgcgacccatccaagcctgacctcggc
aagcacatcgatgatgatggcctacccgctgtcggagctagggttaaaccggaggatcct
ttctacagtttctacgacggcgagaagagcacgttcgtagtgtcccgctaccacggcaag
gaggaggtgttcgtggacagcgtgcggctgtgcggggacttcagcgccaggccgctcaag
aaggcatgcgtcatgctgcggctacagcgtaacccaacagtaggtgacaagttcgcttcc
cgagctggtcagaagggaatctgttcccaaaagtgggcatgcgaggacctacccttcacg
gagtcagggctggtgcctgatgtgctgttcaatcctcacggcttcccttcccgcatgact
atcgctatgatgatcgagtgcatggcggggaaggctgctagcttgcatggtcatgtccac
gacgccacaccattccgtttcaacgagaaggacacagctataaactacttcgggcgttta
ctagaagcgtccgggtacaactactacggcaccgagcgcatgtacagcggggtggacgga
cgggagatggacgctgatatattcttcggcgtcattcactatcagcggcttaggcatatg
gtgtctgataagtggcaggtccgcacaacaggtgcagtggacgcgttaacccggcagccg
gtgaaggggcggcggcgcggcggcggcgtgcggctgggcgagatggagcgcgacgcgctg
gtgtcgcacggcgccgcgttcctgctgcatgatcgactcttccactgctccgataagact
gaggcaatcctgtgctcaaaatgtggaacattactcgggccgatagtcggccgcagtgaa
acgagtaaagaaacttgccgactgtgcggagagggcaacctcgtgtctatagctatacca
tacatcttcaagttctttgtcacacaactcgcttgtgttaatattaatgttaagatcaac
tgtagtgaacaacttgcgttaaccgcgtaa
DBGET
integrated database retrieval system
