Helicoverpa zea (corn earworm): 124642611
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Entry
124642611 CDS
T08400
Name
(RefSeq) uncharacterized protein LOC124642611 isoform X1
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
hze
Helicoverpa zea (corn earworm)
Pathway
hze03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124642611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hze03000
]
124642611
03019 Messenger RNA biogenesis [BR:
hze03019
]
124642611
04121 Ubiquitin system [BR:
hze04121
]
124642611
Enzymes [BR:
hze01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124642611
Transcription factors [BR:
hze03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
124642611
Messenger RNA biogenesis [BR:
hze03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124642611
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
124642611
Ubiquitin system [BR:
hze04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124642611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-RING_2
Baculo_IE-1
zf-C3HC4
Nup35_RRM_2
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
124642611
NCBI-ProteinID:
XP_047037067
LinkDB
All DBs
Position
25:complement(3852597..3870526)
Genome browser
AA seq
982 aa
AA seq
DB search
MSVLNQSGEEQVECPLCMEPLEVDDLHFYPCTCGYQICRFCWNRIREGENGLCPACRKAY
PENPADFTPLSQEQVAAIKTEKKAREQKRRNKTLESRRALANVRVVQNNLVFVVGLPVRL
ADPEILKRQEYFGKYGKIHKVVINQSTTYAGSQGPSASAYVTYVSPADALRAIQGVNNVA
LDGRVLKGSLGTTKYCANFMKNQPCPKPDCMYLHELGDPKASFTKEEMHAGLHQVYERKL
HNQLLQAQRDKPDDKHNNTSGNSSTNAEKSSSKDGTQSNFIPTTVVTSSHINVVNSSKSN
KKECVNGNSGSSSASSSGGGKEAWPSLGASPPADSPARKQPSPKPLHSQVKSQENGTSES
SSPTQQIQQQAQTKQSKETHTDSKTNRTKETSTNGQTSKKSKTDKSKQKSSNSINNDSNE
VELDSKPFSNQTQNFDGDAFLCGELEELETERHGLLEALESQSLLAPRLHEGFLLERPPA
FLGDRGLLLRERSHSEMLVRQSDPLRHGLLDPKHYMQSNSIGLDNASELLGANFHQNPNM
LPPFGMRVDNSMGGSSLSASSLAGNSMANTMGGNSMANTMGGNSMANNMGGNTMANTMGG
NSMANTMGGNSMANTMGGNSMANTMGGNSMANTMGGNSMANTMGGNSMANTMGNTMGSNS
MVNNSMVNNTMGNSMVGNSMVGNSMGGSSMVGNSMVGNTMGGGFMMHNQQLLQQNQQQMQ
QTGLVNGFDAPQSANEVRYLAENMDKFFTDFHKAQQMRLGLARPDERRYVEHARYPHNML
SAERLEMEHKQRMNNIRGNENNGGRAAGDGDDDLDFDPFKETQKAFAELMETEMMQNTVS
SGDNIDRVRRSRLAPPGFSHMTAFGLPQPRPQQTHHQSYNSNSTMFSDWTQMDPAIMSTS
VNFGKNVGSANSSGGQLSQQQQELFARFNQLSVQPNGVKLQAAGLGWGQKLGWGVGLAGI
PLPPGFAPAKPPQHPAECIDAK
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgctgaaccagagtggagaagagcaggtggaatgtcccctgtgtatggaaccc
ttggaggtggacgatctccacttctacccgtgcacatgtggataccaaatatgccggttt
tgctggaatcgaatccgggaaggcgagaacggcctatgtccggcatgtcggaaggcctat
ccggagaacccggcagacttcactccgctcagtcaagagcaggtggcagcaataaagacg
gagaagaaggctcgcgagcagaagcggcgcaacaagacgctggagtcgcggcgagcgctc
gcgaacgttcgcgtcgtgcagaacaacctcgtgttcgtggtcggcctgcccgtacgcctc
gccgacccagagatcctcaaacggcaagagtactttggcaaatatggcaaaattcacaaa
gtagttataaaccagagtaccacgtatgcggggtcacagggtccgtccgcgtcggcgtac
gtgacgtacgtgtcgccggcggacgcgctgcgggccatccagggcgtcaacaacgtggcg
ctcgacggccgcgtgctcaagggctcgctcggcaccaccaagtactgcgccaacttcatg
aagaaccagccctgccccaagcccgactgcatgtatctgcacgagctaggtgatccgaaa
gcgtcgttcacgaaggaagagatgcacgcgggcttgcaccaagtgtacgagcgcaagctg
cacaaccagctgctgcaggcgcaacgggacaaacccgatgacaaacacaataatacttca
ggtaattctagtacgaatgcagaaaaaagcagttcaaaagatggtactcaatcgaacttt
ataccaaccacagtggtcacatcttctcatataaacgtagtcaattcttctaaatctaat
aaaaaagagtgtgtaaacggcaacagtggttcgagtagcgcgtccagcagcggcggcggc
aaggaggcctggcccagcctcggcgcctcgccgcccgccgacagccccgcccgcaagcag
cccagtcccaagccactacactcgcaggttaagtcacaagaaaacggcacatcagaatct
tccagtcccacacaacagatacagcaacaggctcaaacgaaacaaagtaaagaaacacac
acagacagcaaaacgaacagaaccaaggaaactagcacaaacggacaaactagcaagaaa
agtaaaactgataaatccaaacagaagtctagcaatagtattaataatgatagtaacgaa
gtcgaattagatagtaaaccgttcagtaatcagacgcagaatttcgacggggacgcattc
ttatgtggggagcttgaagagttggagacggaaagacatggtctactggaagctctggag
tcgcagtcattattagctccgcgtctacacgaagggttcctgctagagaggccaccagcc
ttcttaggtgatcgtggtttgttgttgcgcgagaggtcacacagcgaaatgctcgtgcgg
cagtcagaccccctccgtcacggactgcttgaccccaagcactatatgcagtccaacagt
ataggactcgataatgctagtgaattattaggtgctaattttcatcaaaatcccaatatg
cttccaccgttcggtatgcgcgtagacaattccatgggcggtagctcgctgtctgcgagt
tcactagccggcaattcgatggcaaacacaatgggtggtaactcgatggcaaatacaatg
ggtggcaactcgatggcaaataatatgggtggcaatacgatggcgaacacaatgggaggc
aactctatggcaaacacaatgggtggcaactctatggcaaacacaatgggaggcaactct
atggcaaacacaatgggaggcaactctatggcaaacacaatgggtggtaactctatggca
aacacaatgggaggcaactctatggcaaacacaatgggcaatacaatgggtagcaactcc
atggtcaacaactctatggtcaataatacaatgggcaattcaatggttggaaactctatg
gtcggcaactcaatgggcggcagttctatggttggcaactctatggtcggcaacacaatg
ggcggcggcttcatgatgcacaatcaacagttactgcaacagaaccagcaacaaatgcaa
cagactggccttgtcaatggattcgatgcaccacagtcggcaaacgaagttcggtacctg
gcagagaacatggacaagttcttcacggacttccacaaggctcagcagatgcggctgggg
ctggctcggccggacgagcggcgctacgtggagcatgctcgctacccgcacaacatgctc
agcgccgagcgcctggagatggagcacaagcagagaatgaacaatatacgcggtaacgaa
aacaatggcggccgtgccgccggcgatggtgacgacgacctagatttcgaccccttcaag
gaaacacagaaggcgtttgcagaactcatggagacagaaatgatgcaaaacacagtttct
agcggtgacaatatagaccgtgtccgccgttcccgcctcgcaccgcccgggttcagtcat
atgaccgcgttcggtctaccacagcctcgcccacaacagacacaccaccaaagttataac
tcaaatagcaccatgttctcagactggactcagatggaccccgcgataatgtcgacgtcg
gtgaacttcggcaagaacgtgggcagcgcgaactcgagcggcggccagctgagccagcag
cagcaggagctgttcgcgcggttcaaccagctgtccgtgcagcccaacggcgtgaagctg
caggccgcggggctgggctgggggcagaagctgggctggggcgtggggctggccggcatc
ccgctgccgcccggcttcgcgcccgccaagccgccgcagcaccccgccgagtgcatcgac
gccaagtag
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