Helicoverpa zea (corn earworm): 124643190
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Entry
124643190 CDS
T08400
Name
(RefSeq) CLIP-associating protein isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
hze
Helicoverpa zea (corn earworm)
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hze03036
]
124643190
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hze04812
]
124643190
Chromosome and associated proteins [BR:
hze03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
124643190
Cytoskeleton proteins [BR:
hze04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
124643190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT_EF3_N
Cnd1
HEAT
TOR1L1_N
Sec7-like_HUS
PDS5
Adaptin_N
HEAT_2
HEAT_Maestro
TAN
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
124643190
NCBI-ProteinID:
XP_047038025
LinkDB
All DBs
Position
27:976546..1038707
Genome browser
AA seq
1461 aa
AA seq
DB search
MAHYPQPASLEAALPLTTRPDLRLRQQLGEQLTALVRREPEITSDVSAQLIDSMVAWLNG
GNFKVAQNALEVLTALAERMGPEFSHYVPTVLPHIIDRLADTKEAVRHTARTCVASLARS
RAVQARALLARLAPALQHKAPHAREEALRCVQALLDHHGATELQLRAAVPNLAALVGDPS
SGVRDAAMQLLVDVYRHVGERLRQDLKKKELLPAQKFALLEQKFDEAREAGLMLPTATGA
DEPDFVSRTVKRTMTIPTSARSRDGDSSGASTPACDAPKRSVAGLYSMPSANRKPPPPAK
LTSTGSVSSGMSTLAGGEAGAVSSEAFEAAFLSAAPAAVYGPRGLDDLCRHAAALLGDRA
ADWEKRVDALKKIRSLLTANAHQQYPTEFAAHLKDLSVPFLVVIKDLRSQVVREACITIA
HMAKVLRNKIDQFSLYILQELINLIQNAAKVVSSAGTICVRYIVSYVHSPRLLPVIVTNL
TTNKSKEIRSTLSEVLVLMLEKWPATTIEKQQAAVRDAIRRACVDADSTCRTYGRRAYAA
YKRHFPDDAEQLFARLDSAAQKQIERERNIGSVDSLHHVGTERRVITSPRSPSASVSDRS
PAGGTARSVSALDAAAAQRARARALYSHMSRNKIPPTASLPRAKRSPVASSGVPPSPERS
VGRSRSRPGVSQSQPTSRSSSPSSRSSGPMSLASARRRPSGIPRSLAGSRETSPTRSGRS
SSVVSSGVRRRESIERTAPSRAPAATLRLLQQSRDAEAMLRSPEDSSACEGGRGRDDDSE
ASSVCSERSLDSYRRHDSVSWSGSGSRLGWECGSPPPPPPPDDIIALCACTHWTERKDGL
THLANYLNSGRLLTDEQLRRLTELLNKMFVDAHTKVFSLLLDAVCELLLVHWQQLKDWLY
QLMFRLLMKLGTDILGSVQSKIMKTLDVIHECFPAELQLHNIFRFLADGATAPTPKTKVA
ALRFLADLAHDYCTPNSLALALHGGATGVAGRALVKVSSLASDPRAADVRVTARRALASL
YDCNPVPFTALMSELPAETQALVNGVVQQHVRRTSSTGSDSPLRTVSGASNAAADDVYSR
IRRTTTEIHTYTAQHSNADCGNHMSSKDSGISQMSDVTLSNKGHNGVPNGHYNAEVLNRA
ASADSSEEANSTKESSPVPANHRMDFQQHGEFNSSQLGRDKIRPYETDENGYIITKSGLR
EPEVLEALCKLDVSAAPPEQWERLLLATHEILKYGDCRKPLEYFKNIVRVALAALSIEEN
AGDKENTENAGNAQQTSGWGTANERAAAEAVKVLIWLCRRPETRSQWQDYFDLILLKLIH
AYESLNKELMRAVEAGMPHIANALPAVQVLALLKPVIRTRGYPTSLCALKLAAEVAKARP
HELTDDLVQNLMEGIGQLADHQNSAVRKAAVFCMVAFTFALGEERMQPHLKHLSVSKYRL
LQVYISKQREEGGRSGGAAPT
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atggcacactacccccaacccgcgtccttagaagcggcgctcccgctaacaacgcgacca
gacctccgcctccgtcaacagttgggcgaacaactgacggcgctggtgcgtcgcgagcca
gagatcacgagcgacgtgtccgcgcagctcatagactctatggtcgcctggctcaatggc
gggaactttaaggtggcacagaatgcgctcgaggtgctgacggcgctcgctgagcgtatg
ggaccggagttctcacactacgtgcccactgtactgccgcatattatagacagactagcg
gacacgaaggaggcggtccggcacaccgcgcggacgtgcgtggcgtcgctggcgcggtcg
cgcgcggtgcaggcgcgggcgctgctggcgcggctggcgcccgcgctgcagcacaaggcg
ccccacgcccgggaagaggcgctgcgctgcgtgcaggcgctgctcgaccatcacggcgcc
acagagctacagctgagggctgcggtgccgaacttagcggcgctggtgggcgaccccagc
agcggagtgcgggatgccgccatgcaactcctcgtcgacgtgtacaggcatgttggtgag
agattaagacaagacttgaagaagaaagagttactgccagcacagaagtttgccttgctc
gaacagaagttcgacgaggcgcgggaagctggactcatgttgcccactgcgacaggagcg
gatgagccggactttgtatcccgaacagtcaagcgaaccatgacgatacccacgtctgct
cgctccagagacggagacagctccggtgcttctacaccagcctgtgacgccccgaagcga
tccgtcgccggtttgtatagcatgccgtcggcgaaccggaagccgccgccgccggcgaaa
ttaactagcacgggtagtgtatcatcgggcatgagcacactagcgggcggcgaggcgggc
gcggtctccagcgaggcgttcgaggcggccttcctgtccgcagcacccgccgccgtgtac
gggcctcgaggcctcgacgacctgtgccgccacgccgccgccctgctcggcgacagggct
gccgactgggagaagcgggtcgatgctctaaagaagatacgttcccttctaacggcgaac
gctcaccagcagtatcctacagaattcgctgcccatctgaaggacctgtccgtgcctttc
ctagtcgtcatcaaggatctgaggagtcaggtggtgcgagaagcctgcataacgatagct
cacatggctaaagttctgcgcaacaagatagaccagttcagtttatacatactacaggag
ttgatcaacctcatacagaatgctgctaaggtggtgtcatcagcgggcacaatatgtgtt
cgctacatagtgtcatacgtacactcaccgcgactgctccccgttatagtcaccaatctt
actactaacaagtctaaggaaattagatctacactcagcgaggtgctagtactaatgcta
gaaaaatggccggcgacgaccatagagaaacaacaggcggccgtgcgcgacgccatccgc
cgcgcatgcgtcgacgccgacagcacctgtcggacatacggcaggagagcatacgcagcg
tacaaacgccacttcccggacgacgcagagcagctgttcgcccgtctcgactccgcagcg
cagaagcagatcgagagagaacgcaatattggcagcgtcgacagcctgcaccatgtcggc
acagaaaggagagttattacaagtcctagaagtccatcagccagtgtttcagatcgttct
ccagccggcggtacggcgcgatcagtgtcagccctagacgcggcggcggcccagcgcgcc
cgcgcccgagccctctactcgcacatgagtcgcaacaagataccgcctacagctagttta
ccgagagccaagagatccccagtggcttctagcggcgtgcctcccagtcctgagcgcagt
gttggacggtctagatctagacctggcgtgtcgcagtcgcaacctacatccagatcctcg
tcgccgtcttctcgcagcagtggtccgatgtcgttagccagcgccaggagaagaccgtcg
ggtataccgcggtctttagctggatcaagggagaccagccctaccaggagcggtcgttca
agcagtgtagtgagttctggtgttcgcagacgagagtccatagagaggaccgcaccttcc
cgtgcccctgccgccaccctcaggctgctgcagcagagcagagacgctgaggctatgtta
aggagtcctgaagacagttcggcttgtgaaggtgggcgcgggcgtgatgacgactctgag
gcttccagcgtctgctcagaaagaagtctggactcttaccgaagacacgatagcgtatcg
tggtcgggctccgggtcgcggctgggctgggagtgcggctcgccgccgccgccgccgccc
ccggacgacatcatcgcgctgtgtgcctgcacacactggactgagaggaaagatggactc
acacatttggcaaactacctaaacagtggccgtctcctaaccgacgaacaactccggcgt
ctaaccgaactcctgaacaagatgttcgtggatgcccacaccaaggtgttctccctgctg
ctggacgccgtctgcgagctgctgctggtgcactggcagcagctgaaggactggctctac
cagctcatgttccgattactaatgaagctaggcacagatatcctcgggtcggtgcagagc
aagatcatgaagacgcttgacgttatacacgagtgcttccccgctgagttgcagctgcat
aatatattcaggttcctagcagacggagcgacagcaccgacgcctaagacgaaagtagcg
gcgctgcggttcctagcggatctcgcgcacgactactgcacgcctaatagtttggcgtta
gctttacatggcggcgccacgggcgtggcgggccgagccctggtgaaggtgtcgtcgctg
gcgagcgacccgcgcgcggccgacgtgcgcgtcacggctaggcgagcgctcgcctcgctg
tatgactgcaatcctgtgcccttcacggcgctaatgagcgagttacccgcggagacgcag
gcgctcgtcaacggcgtggtacaacaacatgtccggagaacttccagcacaggctcggac
agtcctctccgcacagtgagtggggcgagcaacgcggcggcggatgacgtttactcacgc
atacgacgaaccactactgagatacatacttacacggcgcagcatagcaatgcggactgc
ggtaaccacatgtcgagcaaagactctggtatcagtcagatgtcggacgtcacgctctcc
aacaagggacacaacggagtgcccaatggacattacaatgctgaagtgctgaaccgcgca
gcgtcagccgacagctctgaggaggcgaacagtacgaaagagtcgtcgcccgtgcccgct
aaccataggatggacttccagcaacatggggagtttaactcgagtcaactgggacgcgac
aagatcagaccgtacgagactgatgaaaacggatatattattactaaatccggtcttcga
gaaccggaagttttagaagcactatgtaaactggacgtatcagccgccccacccgagcaa
tgggagcgattgctgctcgccacacacgagatcctcaagtatggagactgcaggaaaccg
ctggagtacttcaagaacatagtacgagtggcgctggcggcgttatcaatagaggagaat
gccggtgacaaggaaaatactgaaaacgccggcaatgcacaacaaacctcgggttggggc
acagcaaacgaacgagcagccgccgaagcagtaaaagtcctgatctggctctgccgccgc
cctgagacccggtcccagtggcaagactacttcgacctgatcctgctgaagctcatccac
gcctacgagagcctcaacaaggagctcatgcgggccgtcgaggccggcatgccgcatata
gccaacgctctgcccgctgtccaggtgctagccctgctgaagcccgtgatccgcacccgc
ggctaccccacgtcgctgtgcgcactgaagctggccgccgaagtcgccaaggcacggccg
cacgagctcactgacgatctcgtgcagaacctcatggaggggattggacagttagcagac
caccaaaacagcgcagttcgcaaggcggccgtgttctgcatggtggccttcacgttcgcg
ctcggcgaggaacgcatgcagccgcatctcaagcatctgtccgtcagcaagtaccgcctc
ctgcaggtgtacataagcaagcagcgcgaggagggcggacgctctggcggcgcggcgccc
acgtag
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integrated database retrieval system
